RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 DDX1Q92499 740 aaKnown RBP15.68■□□□□ 0.1
SMC4-204ENST00000462787 PRR11Q96HE9 360 aaPredicted RBP15.68■□□□□ 0.1
SMC4-204ENST00000462787 NUDT4Q9NZJ9 180 aa15.68■□□□□ 0.1
SMC4-204ENST00000462787 PCDHB5Q9Y5E4 795 aa15.68■□□□□ 0.1
SMC4-204ENST00000462787 HTR7P34969 479 aa15.68■□□□□ 0.1
SMC4-204ENST00000462787 CNTN2Q02246 1040 aa15.68■□□□□ 0.1
SMC4-204ENST00000462787 CTXN3Q4LDR2 81 aa15.68■□□□□ 0.1
SMC4-204ENST00000462787 R3HCC1LQ7Z5L2 792 aaKnown RBP15.68■□□□□ 0.1
SMC4-204ENST00000462787 CRELD1Q96HD1 420 aa15.68■□□□□ 0.1
SMC4-204ENST00000462787 CNPPD1Q9BV87 410 aa15.68■□□□□ 0.1
SMC4-204ENST00000462787 ANKRA2Q9H9E1 313 aa15.68■□□□□ 0.1
SMC4-204ENST00000462787 B4GALT5O43286 388 aa15.68■□□□□ 0.1
SMC4-204ENST00000462787 DLX3O60479 287 aa15.68■□□□□ 0.1
SMC4-204ENST00000462787 ATF6P18850 670 aa15.68■□□□□ 0.1
SMC4-204ENST00000462787 ARL2P36404 184 aa15.68■□□□□ 0.1
SMC4-204ENST00000462787 PCBP1Q15365 356 aaKnown RBP eCLIP15.68■□□□□ 0.13e-12■■■■□ 20.8
SMC4-204ENST00000462787 CGB2Q6NT52 195 aa15.68■□□□□ 0.1
SMC4-204ENST00000462787 SLC13A3Q8WWT9 602 aa15.68■□□□□ 0.1
SMC4-204ENST00000462787 QRFPRQ96P65 431 aa15.68■□□□□ 0.1
SMC4-204ENST00000462787 MMP27Q9H306 513 aa15.68■□□□□ 0.1
SMC4-204ENST00000462787 SLC9A8Q9Y2E8 581 aa15.68■□□□□ 0.1
SMC4-204ENST00000462787 FAM172BPA6NC97 362 aa15.68■□□□□ 0.1
SMC4-204ENST00000462787 ZNF286BP0CG31 522 aa15.68■□□□□ 0.1
SMC4-204ENST00000462787 ERVK-8P63133 956 aa15.68■□□□□ 0.1
SMC4-204ENST00000462787 ZNF460Q14592 562 aa15.68■□□□□ 0.1
SMC4-204ENST00000462787 PRAMEF18Q5VWM3 479 aa15.68■□□□□ 0.1
SMC4-204ENST00000462787 IGDCC3Q8IVU1 814 aa15.68■□□□□ 0.1
SMC4-204ENST00000462787 KIAA0319LQ8IZA0 1049 aa15.68■□□□□ 0.1
SMC4-204ENST00000462787 IRGQQ8WZA9 623 aa15.68■□□□□ 0.1
SMC4-204ENST00000462787 TSPAN18Q96SJ8 248 aa15.68■□□□□ 0.1
SMC4-204ENST00000462787 COLEC11Q9BWP8 271 aa15.68■□□□□ 0.1
SMC4-204ENST00000462787 ZNHIT2Q9UHR6 403 aa15.68■□□□□ 0.1
SMC4-204ENST00000462787 HTR3EA5X5Y0 456 aa15.67■□□□□ 0.1
SMC4-204ENST00000462787 PRRG1O14668 218 aa15.67■□□□□ 0.1
SMC4-204ENST00000462787 PKMP14618 531 aaKnown RBP15.67■□□□□ 0.1
SMC4-204ENST00000462787 YWHAQP27348 245 aa15.67■□□□□ 0.1
SMC4-204ENST00000462787 ATP4BP51164 291 aa15.67■□□□□ 0.1
SMC4-204ENST00000462787 PTPN5P54829 565 aa15.67■□□□□ 0.1
SMC4-204ENST00000462787 PUDPQ08623 228 aa15.67■□□□□ 0.1
SMC4-204ENST00000462787 CERS5Q8N5B7 392 aa15.67■□□□□ 0.1
SMC4-204ENST00000462787 TEX47Q8TBZ9 253 aa15.67■□□□□ 0.1
SMC4-204ENST00000462787 SIGLEC10Q96LC7 697 aa15.67■□□□□ 0.1
SMC4-204ENST00000462787 OR2B2Q9GZK3 357 aa15.67■□□□□ 0.1
SMC4-204ENST00000462787 ZNF490Q9ULM2 529 aaPredicted RBP15.67■□□□□ 0.1
SMC4-204ENST00000462787 MAN2B2Q9Y2E5 1009 aa15.67■□□□□ 0.1
SMC4-204ENST00000462787 DCCP43146 1447 aa15.67■□□□□ 0.1
SMC4-204ENST00000462787 LOC100130705A0A1B0GUX0 176 aa15.67■□□□□ 0.1
SMC4-204ENST00000462787 AURKAO14965 403 aa15.67■□□□□ 0.1
SMC4-204ENST00000462787 ACOX3O15254 700 aa15.67■□□□□ 0.1
SMC4-204ENST00000462787 CHST10O43529 356 aa15.67■□□□□ 0.1
SMC4-204ENST00000462787 RPLP2P05387 115 aaKnown RBP15.67■□□□□ 0.1
SMC4-204ENST00000462787 HLCSP50747 726 aa15.67■□□□□ 0.1
SMC4-204ENST00000462787 MAXP61244 160 aa15.67■□□□□ 0.1
SMC4-204ENST00000462787 HERVK_113P63132 956 aa15.67■□□□□ 0.1
SMC4-204ENST00000462787 ZNF45Q02386 682 aa15.67■□□□□ 0.1
SMC4-204ENST00000462787 HNRNPDQ14103 355 aaKnown RBP15.67■□□□□ 0.1
SMC4-204ENST00000462787 BHLHB9Q6PI77 547 aa15.67■□□□□ 0.1
SMC4-204ENST00000462787 MEIOBQ8N635 442 aa15.67■□□□□ 0.1
SMC4-204ENST00000462787 ERVK-6Q9BXR3 956 aa15.67■□□□□ 0.1
SMC4-204ENST00000462787 BCAS3Q9H6U6 928 aa15.67■□□□□ 0.1
SMC4-204ENST00000462787 ASB8Q9H765 288 aa15.67■□□□□ 0.1
SMC4-204ENST00000462787 RPS6KB2Q9UBS0 482 aa15.67■□□□□ 0.1
SMC4-204ENST00000462787 OR6C70A6NIJ9 312 aa15.67■□□□□ 0.1
SMC4-204ENST00000462787 LRATO95237 230 aa15.67■□□□□ 0.1
SMC4-204ENST00000462787 CATP04040 527 aaKnown RBP15.67■□□□□ 0.1
SMC4-204ENST00000462787 CDK4P11802 303 aa15.67■□□□□ 0.1
SMC4-204ENST00000462787 L1CAMP32004 1257 aa15.67■□□□□ 0.1
SMC4-204ENST00000462787 GRIA1P42261 906 aa15.67■□□□□ 0.1
SMC4-204ENST00000462787 TSTD2Q5T7W7 516 aa15.67■□□□□ 0.1
SMC4-204ENST00000462787 RASAL3Q86YV0 1011 aa15.67■□□□□ 0.1
SMC4-204ENST00000462787 CCDC28AQ8IWP9 274 aa15.67■□□□□ 0.1
SMC4-204ENST00000462787 TOP6BLQ8N6T0 577 aa15.67■□□□□ 0.1
SMC4-204ENST00000462787 ANKFN1Q8N957 763 aa15.67■□□□□ 0.1
SMC4-204ENST00000462787 C1orf127Q8N9H9 656 aa15.67■□□□□ 0.1
SMC4-204ENST00000462787 GAD1Q99259 594 aa15.67■□□□□ 0.1
SMC4-204ENST00000462787 GPR88Q9GZN0 384 aa15.67■□□□□ 0.1
SMC4-204ENST00000462787 TTYH1Q9H313 450 aaPredicted RBP15.67■□□□□ 0.1
SMC4-204ENST00000462787 RPF2Q9H7B2 306 aaKnown RBP15.67■□□□□ 0.1
SMC4-204ENST00000462787 AKTIPQ9H8T0 292 aa15.67■□□□□ 0.1
SMC4-204ENST00000462787 GPN1Q9HCN4 374 aaPredicted RBP15.67■□□□□ 0.1
SMC4-204ENST00000462787 XPNPEP1Q9NQW7 623 aa15.67■□□□□ 0.1
SMC4-204ENST00000462787 EBF1Q9UH73 591 aa15.67■□□□□ 0.1
SMC4-204ENST00000462787 AFDNP55196 1824 aaKnown RBP15.67■□□□□ 0.1
SMC4-204ENST00000462787 DUOX1Q9NRD9 1551 aa15.67■□□□□ 0.1
SMC4-204ENST00000462787 FADS2P1A8MWK0 482 aa15.67■□□□□ 0.1
SMC4-204ENST00000462787 MAGEB3O15480 346 aa15.67■□□□□ 0.1
SMC4-204ENST00000462787 SLC7A4O43246 635 aa15.67■□□□□ 0.1
SMC4-204ENST00000462787 CES1P23141 567 aa15.67■□□□□ 0.1
SMC4-204ENST00000462787 NRLP54845 237 aa15.67■□□□□ 0.1
SMC4-204ENST00000462787 MTPNP58546 118 aa15.67■□□□□ 0.1
SMC4-204ENST00000462787 CELF3Q5SZQ8 465 aaKnown RBP15.67■□□□□ 0.1
SMC4-204ENST00000462787 XKRXQ6PP77 449 aa15.67■□□□□ 0.1
SMC4-204ENST00000462787 UGT2A3Q6UWM9 527 aa15.67■□□□□ 0.1
SMC4-204ENST00000462787 LAPTM4BQ86VI4 370 aa15.67■□□□□ 0.1
SMC4-204ENST00000462787 LMO3Q8TAP4 145 aa15.67■□□□□ 0.1
SMC4-204ENST00000462787 ZNF516Q92618 1163 aa15.67■□□□□ 0.1
SMC4-204ENST00000462787 TSSK3Q96PN8 268 aa15.67■□□□□ 0.1
SMC4-204ENST00000462787 TMEM138Q9NPI0 162 aa15.67■□□□□ 0.1
SMC4-204ENST00000462787 FZD10Q9ULW2 581 aa15.67■□□□□ 0.1
SMC4-204ENST00000462787 INMTO95050 263 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms