RNA–Protein interactions for RNA: ENST00000461578.1

PABPC4-208, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5

Gene PABPC4, Length 193 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-208ENST00000461578 WIPF3A6NGB9 483 aa13.51□□□□□ -0.25
PABPC4-208ENST00000461578 SLC25A14O95258 325 aaPredicted RBP13.51□□□□□ -0.25
PABPC4-208ENST00000461578 PRLP01236 227 aa13.51□□□□□ -0.25
PABPC4-208ENST00000461578 EBLN1P0CF75 366 aa13.51□□□□□ -0.25
PABPC4-208ENST00000461578 TCF4P15884 667 aa13.51□□□□□ -0.25
PABPC4-208ENST00000461578 POU3F2P20265 443 aaPredicted RBP13.51□□□□□ -0.25
PABPC4-208ENST00000461578 CLCNKAP51800 687 aa13.51□□□□□ -0.25
PABPC4-208ENST00000461578 DRG2P55039 364 aaKnown RBP13.51□□□□□ -0.25
PABPC4-208ENST00000461578 PDE1BQ01064 536 aa13.51□□□□□ -0.25
PABPC4-208ENST00000461578 RAPSNQ13702 412 aa13.51□□□□□ -0.25
PABPC4-208ENST00000461578 LAMB3Q13751 1172 aa13.51□□□□□ -0.25
PABPC4-208ENST00000461578 DPYSL2Q16555 572 aa13.51□□□□□ -0.25
PABPC4-208ENST00000461578 FAM69BQ5VUD6 431 aa13.51□□□□□ -0.25
PABPC4-208ENST00000461578 TEX26Q8N6G2 289 aa13.51□□□□□ -0.25
PABPC4-208ENST00000461578 RBMXL3Q8N7X1 1067 aaKnown RBP13.51□□□□□ -0.25
PABPC4-208ENST00000461578 MR1Q95460 341 aa13.51□□□□□ -0.25
PABPC4-208ENST00000461578 CXorf40BQ96DE9 158 aa13.51□□□□□ -0.25
PABPC4-208ENST00000461578 C5orf34Q96MH7 638 aa13.51□□□□□ -0.25
PABPC4-208ENST00000461578 MLPHQ9BV36 600 aaPredicted RBP13.51□□□□□ -0.25
PABPC4-208ENST00000461578 SPATA16Q9BXB7 569 aa13.51□□□□□ -0.25
PABPC4-208ENST00000461578 CLSTN2Q9H4D0 955 aa13.51□□□□□ -0.25
PABPC4-208ENST00000461578 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.51□□□□□ -0.25
PABPC4-208ENST00000461578 POT1Q9NUX5 634 aa13.51□□□□□ -0.25
PABPC4-208ENST00000461578 PRRC2CQ9Y520 2896 aaKnown RBP13.51□□□□□ -0.25
PABPC4-208ENST00000461578 DOPEY1Q5JWR5 2465 aa13.51□□□□□ -0.25
PABPC4-208ENST00000461578 ABCA12Q86UK0 2595 aa13.5□□□□□ -0.25
PABPC4-208ENST00000461578 MTX2O75431 263 aa13.5□□□□□ -0.25
PABPC4-208ENST00000461578 SLC4A1P02730 911 aa13.5□□□□□ -0.25
PABPC4-208ENST00000461578 BRAFP15056 766 aa13.5□□□□□ -0.25
PABPC4-208ENST00000461578 ZNF7P17097 686 aaPredicted RBP13.5□□□□□ -0.25
PABPC4-208ENST00000461578 IL4RP24394 825 aa13.5□□□□□ -0.25
PABPC4-208ENST00000461578 SERPINB6P35237 376 aa13.5□□□□□ -0.25
PABPC4-208ENST00000461578 BECN1Q14457 450 aa13.5□□□□□ -0.25
PABPC4-208ENST00000461578 ANKRD20A8PQ5CZ79 823 aa13.5□□□□□ -0.25
PABPC4-208ENST00000461578 ZNF569Q5MCW4 686 aa13.5□□□□□ -0.25
PABPC4-208ENST00000461578 ADGRG6Q86SQ4 1221 aa13.5□□□□□ -0.25
PABPC4-208ENST00000461578 RHOT1Q8IXI2 618 aa13.5□□□□□ -0.25
PABPC4-208ENST00000461578 CCHCR1Q8TD31 782 aa13.5□□□□□ -0.25
PABPC4-208ENST00000461578 LRRN4Q8WUT4 740 aa13.5□□□□□ -0.25
PABPC4-208ENST00000461578 PNPLA2Q96AD5 504 aa13.5□□□□□ -0.25
PABPC4-208ENST00000461578 SNRNP40Q96DI7 357 aaKnown RBP13.5□□□□□ -0.25
PABPC4-208ENST00000461578 PCDH9Q9HC56 1237 aa13.5□□□□□ -0.25
PABPC4-208ENST00000461578 SLC40A1Q9NP59 571 aa13.5□□□□□ -0.25
PABPC4-208ENST00000461578 G3BP2Q9UN86 482 aaKnown RBP13.5□□□□□ -0.25
PABPC4-208ENST00000461578 SLC5A6Q9Y289 635 aa13.5□□□□□ -0.25
PABPC4-208ENST00000461578 ANKRD17O75179 2603 aaKnown RBP13.49□□□□□ -0.25
PABPC4-208ENST00000461578 KMOO15229 486 aa13.49□□□□□ -0.25
PABPC4-208ENST00000461578 CEACAM4O75871 244 aa13.49□□□□□ -0.25
PABPC4-208ENST00000461578 TMEM63AO94886 807 aa13.49□□□□□ -0.25
PABPC4-208ENST00000461578 CA4P22748 312 aa13.49□□□□□ -0.25
PABPC4-208ENST00000461578 ELAVL4P26378 380 aaKnown RBP13.49□□□□□ -0.25
PABPC4-208ENST00000461578 ARL4DP49703 201 aa13.49□□□□□ -0.25
PABPC4-208ENST00000461578 ACY1Q03154 408 aa13.49□□□□□ -0.25
PABPC4-208ENST00000461578 NIPAL4Q0D2K0 466 aa13.49□□□□□ -0.25
PABPC4-208ENST00000461578 GPS2Q13227 327 aa13.49□□□□□ -0.25
PABPC4-208ENST00000461578 CDKAL1Q5VV42 579 aa13.49□□□□□ -0.25
PABPC4-208ENST00000461578 TXNRD3NBQ6F5E7 133 aa13.49□□□□□ -0.25
PABPC4-208ENST00000461578 LRRTM4Q86VH4 590 aa13.49□□□□□ -0.25
PABPC4-208ENST00000461578 TMEM126BQ8IUX1 230 aa13.49□□□□□ -0.25
PABPC4-208ENST00000461578 SLC41A2Q96JW4 573 aa13.49□□□□□ -0.25
PABPC4-208ENST00000461578 ZNF514Q96K75 400 aaPredicted RBP13.49□□□□□ -0.25
PABPC4-208ENST00000461578 MAP3K3Q99759 626 aa13.49□□□□□ -0.25
PABPC4-208ENST00000461578 CHST8Q9H2A9 424 aa13.49□□□□□ -0.25
PABPC4-208ENST00000461578 TRIM39Q9HCM9 518 aa13.49□□□□□ -0.25
PABPC4-208ENST00000461578 WASH6PQ9NQA3 447 aa13.49□□□□□ -0.25
PABPC4-208ENST00000461578 FGF21Q9NSA1 209 aa13.49□□□□□ -0.25
PABPC4-208ENST00000461578 ASF1BQ9NVP2 202 aa13.49□□□□□ -0.25
PABPC4-208ENST00000461578 RBM22Q9NW64 420 aaKnown RBP eCLIP13.49□□□□□ -0.25
PABPC4-208ENST00000461578 MYO1AQ9UBC5 1043 aa13.49□□□□□ -0.25
PABPC4-208ENST00000461578 EPHA6Q9UF33 1036 aa13.49□□□□□ -0.25
PABPC4-208ENST00000461578 SNX7Q9UNH6 387 aa13.49□□□□□ -0.25
PABPC4-208ENST00000461578 PCDHGB7Q9Y5F8 929 aa13.49□□□□□ -0.25
PABPC4-208ENST00000461578 F5H423 210 aaPredicted RBP13.48□□□□□ -0.25
PABPC4-208ENST00000461578 CHUKO15111 745 aa13.48□□□□□ -0.25
PABPC4-208ENST00000461578 MFSD11O43934 449 aa13.48□□□□□ -0.25
PABPC4-208ENST00000461578 CPNE3O75131 537 aaKnown RBP13.48□□□□□ -0.25
PABPC4-208ENST00000461578 SCRG1O75711 98 aa13.48□□□□□ -0.25
PABPC4-208ENST00000461578 CBX6O95503 412 aa13.48□□□□□ -0.25
PABPC4-208ENST00000461578 RARAP10276 462 aa13.48□□□□□ -0.25
PABPC4-208ENST00000461578 ATP1A3P13637 1013 aa13.48□□□□□ -0.25
PABPC4-208ENST00000461578 FERP16591 822 aa13.48□□□□□ -0.25
PABPC4-208ENST00000461578 LPOP22079 712 aaPredicted RBP13.48□□□□□ -0.25
PABPC4-208ENST00000461578 VARSP26640 1264 aaKnown RBP13.48□□□□□ -0.25
PABPC4-208ENST00000461578 ZNF165P49910 485 aa13.48□□□□□ -0.25
PABPC4-208ENST00000461578 UBXN1Q04323 297 aa13.48□□□□□ -0.25
PABPC4-208ENST00000461578 CDK18Q07002 472 aa13.48□□□□□ -0.25
PABPC4-208ENST00000461578 MMRN1Q13201 1228 aa13.48□□□□□ -0.25
PABPC4-208ENST00000461578 GPR19Q15760 415 aa13.48□□□□□ -0.25
PABPC4-208ENST00000461578 QPCTQ16769 361 aa13.48□□□□□ -0.25
PABPC4-208ENST00000461578 PRAMEF17Q5VTA0 474 aa13.48□□□□□ -0.25
PABPC4-208ENST00000461578 LCN10Q6JVE6 187 aa13.48□□□□□ -0.25
PABPC4-208ENST00000461578 RAVER1Q8IY67 606 aaKnown RBP13.48□□□□□ -0.25
PABPC4-208ENST00000461578 CISD2Q8N5K1 135 aaKnown RBP13.48□□□□□ -0.25
PABPC4-208ENST00000461578 ENDOVQ8N8Q3 282 aaKnown RBP13.48□□□□□ -0.25
PABPC4-208ENST00000461578 TTC13Q8NBP0 860 aa13.48□□□□□ -0.25
PABPC4-208ENST00000461578 GPR26Q8NDV2 337 aa13.48□□□□□ -0.25
PABPC4-208ENST00000461578 ARRDC2Q8TBH0 407 aa13.48□□□□□ -0.25
PABPC4-208ENST00000461578 ADAMTS17Q8TE56 1095 aa13.48□□□□□ -0.25
PABPC4-208ENST00000461578 UBXN4Q92575 508 aa13.48□□□□□ -0.25
PABPC4-208ENST00000461578 EID2BQ96D98 161 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms