RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 TMEM220Q6QAJ8 160 aa10.44□□□□□ -0.74
TRAPPC12-213ENST00000461577 RBM44Q6ZP01 1051 aaKnown RBP10.44□□□□□ -0.74
TRAPPC12-213ENST00000461577 DET1Q7L5Y6 550 aa10.44□□□□□ -0.74
TRAPPC12-213ENST00000461577 NLRP9Q7RTR0 991 aa10.44□□□□□ -0.74
TRAPPC12-213ENST00000461577 TAS2R42Q7RTR8 314 aa10.44□□□□□ -0.74
TRAPPC12-213ENST00000461577 CCNJLQ8IV13 435 aa10.44□□□□□ -0.74
TRAPPC12-213ENST00000461577 NAGSQ8N159 534 aa10.44□□□□□ -0.74
TRAPPC12-213ENST00000461577 CACTIN-AS1Q8N1I8 211 aa10.44□□□□□ -0.74
TRAPPC12-213ENST00000461577 ARL14Q8N4G2 192 aa10.44□□□□□ -0.74
TRAPPC12-213ENST00000461577 RASGEF1AQ8N9B8 481 aa10.44□□□□□ -0.74
TRAPPC12-213ENST00000461577 HEXDCQ8WVB3 486 aa10.44□□□□□ -0.74
TRAPPC12-213ENST00000461577 PATE1Q8WXA2 126 aa10.44□□□□□ -0.74
TRAPPC12-213ENST00000461577 CDKN2AIPNLQ96HQ2 116 aa10.44□□□□□ -0.74
TRAPPC12-213ENST00000461577 RANBP9Q96S59 729 aa10.44□□□□□ -0.74
TRAPPC12-213ENST00000461577 TIMM29Q9BSF4 260 aa10.44□□□□□ -0.74
TRAPPC12-213ENST00000461577 STN1Q9H668 368 aaKnown RBP10.44□□□□□ -0.74
TRAPPC12-213ENST00000461577 DNAJC16Q9Y2G8 782 aa10.44□□□□□ -0.74
TRAPPC12-213ENST00000461577 TCAF1Q9Y4C2 921 aa10.44□□□□□ -0.74
TRAPPC12-213ENST00000461577 ASXL3Q9C0F0 2248 aa10.43□□□□□ -0.74
TRAPPC12-213ENST00000461577 MROH6A6NGR9 719 aa10.43□□□□□ -0.74
TRAPPC12-213ENST00000461577 OR2AG2A6NM03 316 aa10.43□□□□□ -0.74
TRAPPC12-213ENST00000461577 OR5K4A6NMS3 321 aa10.43□□□□□ -0.74
TRAPPC12-213ENST00000461577 PDZK1P1A8MUH7 402 aa10.43□□□□□ -0.74
TRAPPC12-213ENST00000461577 KCNJ13O60928 360 aa10.43□□□□□ -0.74
TRAPPC12-213ENST00000461577 CSO75390 466 aaKnown RBP10.43□□□□□ -0.74
TRAPPC12-213ENST00000461577 TCEA3O75764 348 aa10.43□□□□□ -0.74
TRAPPC12-213ENST00000461577 RPLP0P05388 317 aaKnown RBP10.43□□□□□ -0.74
TRAPPC12-213ENST00000461577 PBLDP30039 288 aaPredicted RBP10.43□□□□□ -0.74
TRAPPC12-213ENST00000461577 NPY2RP49146 381 aa10.43□□□□□ -0.74
TRAPPC12-213ENST00000461577 PPM1FP49593 454 aaPredicted RBP10.43□□□□□ -0.74
TRAPPC12-213ENST00000461577 PRAMEP78395 509 aa10.43□□□□□ -0.74
TRAPPC12-213ENST00000461577 CACNG1Q06432 222 aa10.43□□□□□ -0.74
TRAPPC12-213ENST00000461577 KCTD19Q17RG1 926 aaPredicted RBP10.43□□□□□ -0.74
TRAPPC12-213ENST00000461577 PCID2Q5JVF3 399 aa10.43□□□□□ -0.74
TRAPPC12-213ENST00000461577 TSTD2Q5T7W7 516 aa10.43□□□□□ -0.74
TRAPPC12-213ENST00000461577 CDCP2Q5VXM1 449 aa10.43□□□□□ -0.74
TRAPPC12-213ENST00000461577 LRRC8BQ6P9F7 803 aa10.43□□□□□ -0.74
TRAPPC12-213ENST00000461577 UNQ6494/PRO21346Q6UXR6 183 aa10.43□□□□□ -0.74
TRAPPC12-213ENST00000461577 AMZ2Q86W34 360 aa10.43□□□□□ -0.74
TRAPPC12-213ENST00000461577 C17orf82Q86X59 251 aaPredicted RBP10.43□□□□□ -0.74
TRAPPC12-213ENST00000461577 NXPE1Q8N323 547 aa10.43□□□□□ -0.74
TRAPPC12-213ENST00000461577 C17orf53Q8N3J3 647 aaPredicted RBP10.43□□□□□ -0.74
TRAPPC12-213ENST00000461577 DCBLD1Q8N8Z6 715 aa10.43□□□□□ -0.74
TRAPPC12-213ENST00000461577 GATA6Q92908 595 aa10.43□□□□□ -0.74
TRAPPC12-213ENST00000461577 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.43□□□□□ -0.74
TRAPPC12-213ENST00000461577 ZNF514Q96K75 400 aaPredicted RBP10.43□□□□□ -0.74
TRAPPC12-213ENST00000461577 CNTNAP3BQ96NU0 1288 aa10.43□□□□□ -0.74
TRAPPC12-213ENST00000461577 GFM1Q96RP9 751 aaKnown RBP10.43□□□□□ -0.74
TRAPPC12-213ENST00000461577 COPS8Q99627 209 aa10.43□□□□□ -0.74
TRAPPC12-213ENST00000461577 CNTNAP3Q9BZ76 1288 aa10.43□□□□□ -0.74
TRAPPC12-213ENST00000461577 DDX47Q9H0S4 455 aaKnown RBP10.43□□□□□ -0.74
TRAPPC12-213ENST00000461577 LRRN3Q9H3W5 708 aa10.43□□□□□ -0.74
TRAPPC12-213ENST00000461577 KCND1Q9NSA2 647 aa10.43□□□□□ -0.74
TRAPPC12-213ENST00000461577 ZDHHC3Q9NYG2 299 aa10.43□□□□□ -0.74
TRAPPC12-213ENST00000461577 BFARQ9NZS9 450 aa10.43□□□□□ -0.74
TRAPPC12-213ENST00000461577 TBC1D29Q9UFV1 150 aa10.43□□□□□ -0.74
TRAPPC12-213ENST00000461577 SLC23A2Q9UGH3 650 aa10.43□□□□□ -0.74
TRAPPC12-213ENST00000461577 RABGEF1Q9UJ41 708 aa10.43□□□□□ -0.74
TRAPPC12-213ENST00000461577 RIMKLBQ9ULI2 386 aa10.43□□□□□ -0.74
TRAPPC12-213ENST00000461577 DNMT3AQ9Y6K1 912 aaPredicted RBP10.43□□□□□ -0.74
TRAPPC12-213ENST00000461577 NCOR2Q9Y618 2525 aa10.42□□□□□ -0.74
TRAPPC12-213ENST00000461577 KIR2DS5A0A0G2JLQ3 304 aa10.42□□□□□ -0.74
TRAPPC12-213ENST00000461577 A0A0G2JNG1 304 aa10.42□□□□□ -0.74
TRAPPC12-213ENST00000461577 TCRBV7S3A2A0A539 114 aa10.42□□□□□ -0.74
TRAPPC12-213ENST00000461577 CCDC162PA2VCL2 907 aa10.42□□□□□ -0.74
TRAPPC12-213ENST00000461577 AGAP14A8MT82 685 aa10.42□□□□□ -0.74
TRAPPC12-213ENST00000461577 C1QTNF9BB2RNN3 333 aa10.42□□□□□ -0.74
TRAPPC12-213ENST00000461577 KIR2DS3K7RE56 304 aa10.42□□□□□ -0.74
TRAPPC12-213ENST00000461577 POP7O75817 140 aaKnown RBP10.42□□□□□ -0.74
TRAPPC12-213ENST00000461577 EML2O95834 649 aa10.42□□□□□ -0.74
TRAPPC12-213ENST00000461577 C1QTNF9P0C862 333 aa10.42□□□□□ -0.74
TRAPPC12-213ENST00000461577 F3P13726 295 aa10.42□□□□□ -0.74
TRAPPC12-213ENST00000461577 ATP1B2P14415 290 aaPredicted RBP10.42□□□□□ -0.74
TRAPPC12-213ENST00000461577 IDSP22304 550 aa10.42□□□□□ -0.74
TRAPPC12-213ENST00000461577 ACRV1P26436 265 aa10.42□□□□□ -0.74
TRAPPC12-213ENST00000461577 ALDH4A1P30038 563 aa10.42□□□□□ -0.74
TRAPPC12-213ENST00000461577 CASQ1P31415 396 aa10.42□□□□□ -0.74
TRAPPC12-213ENST00000461577 CDKN1CP49918 316 aaPredicted RBP10.42□□□□□ -0.74
TRAPPC12-213ENST00000461577 ARSDP51689 593 aa10.42□□□□□ -0.74
TRAPPC12-213ENST00000461577 CTSCP53634 463 aa10.42□□□□□ -0.74
TRAPPC12-213ENST00000461577 HHEXQ03014 270 aa10.42□□□□□ -0.74
TRAPPC12-213ENST00000461577 KCNJ11Q14654 390 aa10.42□□□□□ -0.74
TRAPPC12-213ENST00000461577 KIR2DS5Q14953 304 aa10.42□□□□□ -0.74
TRAPPC12-213ENST00000461577 SEPT7Q16181 437 aaKnown RBP10.42□□□□□ -0.74
TRAPPC12-213ENST00000461577 FNBP1LQ5T0N5 605 aa10.42□□□□□ -0.74
TRAPPC12-213ENST00000461577 IYDQ6PHW0 289 aa10.42□□□□□ -0.74
TRAPPC12-213ENST00000461577 AFTPHQ6ULP2 937 aa10.42□□□□□ -0.74
TRAPPC12-213ENST00000461577 SPRED1Q7Z699 444 aa10.42□□□□□ -0.74
TRAPPC12-213ENST00000461577 SLC9B2Q86UD5 537 aa10.42□□□□□ -0.74
TRAPPC12-213ENST00000461577 SERPINA9Q86WD7 417 aa10.42□□□□□ -0.74
TRAPPC12-213ENST00000461577 ZNF547Q8IVP9 402 aa10.42□□□□□ -0.74
TRAPPC12-213ENST00000461577 TRIM48Q8IWZ4 208 aa10.42□□□□□ -0.74
TRAPPC12-213ENST00000461577 AVL9Q8NBF6 648 aa10.42□□□□□ -0.74
TRAPPC12-213ENST00000461577 OR6P1Q8NGX9 317 aa10.42□□□□□ -0.74
TRAPPC12-213ENST00000461577 SLC37A2Q8TED4 501 aa10.42□□□□□ -0.74
TRAPPC12-213ENST00000461577 HDAC10Q969S8 669 aa10.42□□□□□ -0.74
TRAPPC12-213ENST00000461577 SH3KBP1Q96B97 665 aa10.42□□□□□ -0.74
TRAPPC12-213ENST00000461577 SGF29Q96ES7 293 aa10.42□□□□□ -0.74
TRAPPC12-213ENST00000461577 RUNDC3BQ96NL0 473 aa10.42□□□□□ -0.74
TRAPPC12-213ENST00000461577 TTC1Q99614 292 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms