RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 CHRNA6Q15825 494 aa10.25□□□□□ -0.77
USP39-210ENST00000459775 FBXO43Q4G163 708 aa10.25□□□□□ -0.77
USP39-210ENST00000459775 SEL1L3Q68CR1 1132 aa10.25□□□□□ -0.77
USP39-210ENST00000459775 ZNF776Q68DI1 518 aaPredicted RBP10.25□□□□□ -0.77
USP39-210ENST00000459775 CWF19L1Q69YN2 538 aaKnown RBP10.25□□□□□ -0.77
USP39-210ENST00000459775 KIAA0930Q6ICG6 404 aaPredicted RBP10.25□□□□□ -0.77
USP39-210ENST00000459775 LIPIQ6XZB0 460 aa10.25□□□□□ -0.77
USP39-210ENST00000459775 USP51Q70EK9 711 aa10.25□□□□□ -0.77
USP39-210ENST00000459775 STRA8Q7Z7C7 330 aa10.25□□□□□ -0.77
USP39-210ENST00000459775 DSG4Q86SJ6 1040 aa10.25□□□□□ -0.77
USP39-210ENST00000459775 CCNJLQ8IV13 435 aa10.25□□□□□ -0.77
USP39-210ENST00000459775 STYXQ8WUJ0 223 aa10.25□□□□□ -0.77
USP39-210ENST00000459775 PTCD2Q8WV60 388 aaKnown RBP10.25□□□□□ -0.77
USP39-210ENST00000459775 FAM136AQ96C01 138 aa10.25□□□□□ -0.77
USP39-210ENST00000459775 SIPA1Q96FS4 1042 aa10.25□□□□□ -0.77
USP39-210ENST00000459775 LYSMD1Q96S90 227 aa10.25□□□□□ -0.77
USP39-210ENST00000459775 RUFY1Q96T51 708 aa10.25□□□□□ -0.77
USP39-210ENST00000459775 VIPAS39Q9H9C1 493 aa10.25□□□□□ -0.77
USP39-210ENST00000459775 MRM3Q9HC36 420 aaKnown RBP10.25□□□□□ -0.77
USP39-210ENST00000459775 DYRK4Q9NR20 520 aa10.25□□□□□ -0.77
USP39-210ENST00000459775 PAPOLBQ9NRJ5 636 aaKnown RBP10.25□□□□□ -0.77
USP39-210ENST00000459775 EBF1Q9UH73 591 aa10.25□□□□□ -0.77
USP39-210ENST00000459775 INVSQ9Y283 1065 aa10.25□□□□□ -0.77
USP39-210ENST00000459775 CARD8Q9Y2G2 431 aa10.25□□□□□ -0.77
USP39-210ENST00000459775 PKP3Q9Y446 797 aa10.25□□□□□ -0.77
USP39-210ENST00000459775 ENO4A6NNW6 628 aa10.24□□□□□ -0.77
USP39-210ENST00000459775 H0YC42 278 aa10.24□□□□□ -0.77
USP39-210ENST00000459775 K7ESM1 405 aa10.24□□□□□ -0.77
USP39-210ENST00000459775 OR1I1O60431 355 aa10.24□□□□□ -0.77
USP39-210ENST00000459775 RNASEH1O60930 286 aaKnown RBP10.24□□□□□ -0.77
USP39-210ENST00000459775 AHSGP02765 367 aa10.24□□□□□ -0.77
USP39-210ENST00000459775 MSH2P43246 934 aa10.24□□□□□ -0.77
USP39-210ENST00000459775 NEK3P51956 506 aa10.24□□□□□ -0.77
USP39-210ENST00000459775 THOC5Q13769 683 aaKnown RBP10.24□□□□□ -0.77
USP39-210ENST00000459775 ACOX1Q15067 660 aa10.24□□□□□ -0.77
USP39-210ENST00000459775 ZRANB3Q5FWF4 1079 aa10.24□□□□□ -0.77
USP39-210ENST00000459775 ZNF648Q5T619 568 aaPredicted RBP10.24□□□□□ -0.77
USP39-210ENST00000459775 MROH9Q5TGP6 573 aa10.24□□□□□ -0.77
USP39-210ENST00000459775 CNSTQ6PJW8 725 aa10.24□□□□□ -0.77
USP39-210ENST00000459775 DPPA4Q7L190 304 aa10.24□□□□□ -0.77
USP39-210ENST00000459775 LRRC6Q86X45 466 aa10.24□□□□□ -0.77
USP39-210ENST00000459775 CCDC116Q8IYX3 515 aa10.24□□□□□ -0.77
USP39-210ENST00000459775 FAM160A2Q8N612 972 aaPredicted RBP10.24□□□□□ -0.77
USP39-210ENST00000459775 OR4L1Q8NH43 312 aa10.24□□□□□ -0.77
USP39-210ENST00000459775 OR14C36Q8NHC7 312 aa10.24□□□□□ -0.77
USP39-210ENST00000459775 SLC44A1Q8WWI5 657 aa10.24□□□□□ -0.77
USP39-210ENST00000459775 RLN3Q8WXF3 142 aa10.24□□□□□ -0.77
USP39-210ENST00000459775 OMDQ99983 421 aa10.24□□□□□ -0.77
USP39-210ENST00000459775 UQCC2Q9BRT2 126 aa10.24□□□□□ -0.77
USP39-210ENST00000459775 DHRS4Q9BTZ2 278 aa10.24□□□□□ -0.77
USP39-210ENST00000459775 CAB39LQ9H9S4 337 aa10.24□□□□□ -0.77
USP39-210ENST00000459775 MBD1Q9UIS9 605 aaPredicted RBP10.24□□□□□ -0.77
USP39-210ENST00000459775 CRYL1Q9Y2S2 319 aa10.24□□□□□ -0.77
USP39-210ENST00000459775 FADS3Q9Y5Q0 445 aa10.24□□□□□ -0.77
USP39-210ENST00000459775 IGLON5A6NGN9 336 aa10.24□□□□□ -0.77
USP39-210ENST00000459775 LRRC72A6NJI9 287 aa10.24□□□□□ -0.77
USP39-210ENST00000459775 GOLGA8RI6L899 631 aa10.24□□□□□ -0.77
USP39-210ENST00000459775 NPC1O15118 1278 aa10.24□□□□□ -0.77
USP39-210ENST00000459775 CD3EAPO15446 510 aaKnown RBP10.24□□□□□ -0.77
USP39-210ENST00000459775 MTX2O75431 263 aa10.24□□□□□ -0.77
USP39-210ENST00000459775 SPAG6O75602 509 aa10.24□□□□□ -0.77
USP39-210ENST00000459775 PCDH8O95206 1070 aa10.24□□□□□ -0.77
USP39-210ENST00000459775 PAPSS2O95340 614 aaPredicted RBP10.24□□□□□ -0.77
USP39-210ENST00000459775 DNTTP04053 509 aa10.24□□□□□ -0.77
USP39-210ENST00000459775 ELFN1P0C7U0 828 aa10.24□□□□□ -0.77
USP39-210ENST00000459775 TSHRP16473 764 aa10.24□□□□□ -0.77
USP39-210ENST00000459775 ENDOUP21128 410 aaKnown RBP10.24□□□□□ -0.77
USP39-210ENST00000459775 SAT1P21673 171 aa10.24□□□□□ -0.77
USP39-210ENST00000459775 C5AR1P21730 350 aa10.24□□□□□ -0.77
USP39-210ENST00000459775 MAT2AP31153 395 aaKnown RBP10.24□□□□□ -0.77
USP39-210ENST00000459775 ACSL1P33121 698 aa10.24□□□□□ -0.77
USP39-210ENST00000459775 HSD17B2P37059 387 aa10.24□□□□□ -0.77
USP39-210ENST00000459775 SPINT3P49223 89 aa10.24□□□□□ -0.77
USP39-210ENST00000459775 STC1P52823 247 aa10.24□□□□□ -0.77
USP39-210ENST00000459775 MTAPQ13126 283 aa10.24□□□□□ -0.77
USP39-210ENST00000459775 ARHGEF7Q14155 803 aa10.24□□□□□ -0.77
USP39-210ENST00000459775 EOGTQ5NDL2 527 aa10.24□□□□□ -0.77
USP39-210ENST00000459775 FAM46CQ5VWP2 391 aa10.24□□□□□ -0.77
USP39-210ENST00000459775 PDPK2PQ6A1A2 396 aa10.24□□□□□ -0.77
USP39-210ENST00000459775 MZT2BQ6NZ67 158 aa10.24□□□□□ -0.77
USP39-210ENST00000459775 LRIG3Q6UXM1 1119 aa10.24□□□□□ -0.77
USP39-210ENST00000459775 TAS2R42Q7RTR8 314 aa10.24□□□□□ -0.77
USP39-210ENST00000459775 PACS2Q86VP3 889 aa10.24□□□□□ -0.77
USP39-210ENST00000459775 PPP1R16AQ96I34 528 aa10.24□□□□□ -0.77
USP39-210ENST00000459775 NDNQ99608 321 aa10.24□□□□□ -0.77
USP39-210ENST00000459775 SH3GL2Q99962 352 aa10.24□□□□□ -0.77
USP39-210ENST00000459775 TPSD1Q9BZJ3 242 aa10.24□□□□□ -0.77
USP39-210ENST00000459775 TMBIM4Q9HC24 238 aa10.24□□□□□ -0.77
USP39-210ENST00000459775 EURLQ9NYK6 297 aa10.24□□□□□ -0.77
USP39-210ENST00000459775 HACD3Q9P035 362 aa10.24□□□□□ -0.77
USP39-210ENST00000459775 PFDN2Q9UHV9 154 aa10.24□□□□□ -0.77
USP39-210ENST00000459775 TMPRSS11EQ9UL52 423 aa10.24□□□□□ -0.77
USP39-210ENST00000459775 RIMKLBQ9ULI2 386 aa10.24□□□□□ -0.77
USP39-210ENST00000459775 NOVA2Q9UNW9 492 aaKnown RBP10.24□□□□□ -0.77
USP39-210ENST00000459775 MTO1Q9Y2Z2 717 aaKnown RBP10.24□□□□□ -0.77
USP39-210ENST00000459775 NUMA1Q14980 2115 aa10.23□□□□□ -0.77
USP39-210ENST00000459775 VPS13AQ96RL7 3174 aa10.23□□□□□ -0.77
USP39-210ENST00000459775 PRMT3O60678 531 aa10.23□□□□□ -0.77
USP39-210ENST00000459775 PRAMEF1O95521 474 aa10.23□□□□□ -0.77
USP39-210ENST00000459775 TOP3BO95985 862 aaKnown RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms