RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 ITGALP20701 1170 aa20.44■□□□□ 0.86
VARS-218ENST00000459667 PDX1P52945 283 aa20.44■□□□□ 0.86
VARS-218ENST00000459667 B4GALNT1Q00973 533 aa20.44■□□□□ 0.86
VARS-218ENST00000459667 NR1D2Q14995 579 aa20.44■□□□□ 0.86
VARS-218ENST00000459667 C4orf22Q6V702 233 aa20.44■□□□□ 0.86
VARS-218ENST00000459667 PROSER1Q86XN7 944 aa20.44■□□□□ 0.86
VARS-218ENST00000459667 RASGEF1AQ8N9B8 481 aa20.44■□□□□ 0.86
VARS-218ENST00000459667 GRAMD1AQ96CP6 724 aa20.44■□□□□ 0.86
VARS-218ENST00000459667 ATXN7L3BQ96GX2 97 aa20.44■□□□□ 0.86
VARS-218ENST00000459667 OSBPL9Q96SU4 736 aa20.44■□□□□ 0.86
VARS-218ENST00000459667 NLE1Q9NVX2 485 aaPredicted RBP20.44■□□□□ 0.86
VARS-218ENST00000459667 TTC7AQ9ULT0 858 aaPredicted RBP20.44■□□□□ 0.86
VARS-218ENST00000459667 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.44■□□□□ 0.86
VARS-218ENST00000459667 ASPMQ8IZT6 3477 aa20.43■□□□□ 0.86
VARS-218ENST00000459667 PGRMC1O00264 195 aaKnown RBP20.43■□□□□ 0.86
VARS-218ENST00000459667 PPM1DO15297 605 aa20.43■□□□□ 0.86
VARS-218ENST00000459667 ZW10O43264 779 aa20.43■□□□□ 0.86
VARS-218ENST00000459667 VCLP18206 1134 aa20.43■□□□□ 0.86
VARS-218ENST00000459667 MSH3P20585 1137 aa20.43■□□□□ 0.86
VARS-218ENST00000459667 ALDH4A1P30038 563 aa20.43■□□□□ 0.86
VARS-218ENST00000459667 MC4RP32245 332 aa20.43■□□□□ 0.86
VARS-218ENST00000459667 GRIA1P42261 906 aa20.43■□□□□ 0.86
VARS-218ENST00000459667 FASLGP48023 281 aa20.43■□□□□ 0.86
VARS-218ENST00000459667 CTSCP53634 463 aa20.43■□□□□ 0.86
VARS-218ENST00000459667 GNG11P61952 73 aa20.43■□□□□ 0.86
VARS-218ENST00000459667 BASP1P80723 227 aaKnown RBP20.43■□□□□ 0.86
VARS-218ENST00000459667 IYDQ6PHW0 289 aa20.43■□□□□ 0.86
VARS-218ENST00000459667 SNX20Q7Z614 316 aa20.43■□□□□ 0.86
VARS-218ENST00000459667 C11orf96Q7Z7L8 435 aa20.43■□□□□ 0.86
VARS-218ENST00000459667 STYXQ8WUJ0 223 aa20.43■□□□□ 0.86
VARS-218ENST00000459667 ULK4Q96C45 1275 aa20.43■□□□□ 0.86
VARS-218ENST00000459667 STN1Q9H668 368 aaKnown RBP20.43■□□□□ 0.86
VARS-218ENST00000459667 PRDM8Q9NQV8 689 aa20.43■□□□□ 0.86
VARS-218ENST00000459667 ATXN7L1Q9ULK2 861 aaPredicted RBP20.43■□□□□ 0.86
VARS-218ENST00000459667 SLC30A1Q9Y6M5 507 aa20.43■□□□□ 0.86
VARS-218ENST00000459667 KIR2DS5A0A0G2JLQ3 304 aa20.42■□□□□ 0.86
VARS-218ENST00000459667 A0A0G2JNG1 304 aa20.42■□□□□ 0.86
VARS-218ENST00000459667 CCDC78A2IDD5 438 aa20.42■□□□□ 0.86
VARS-218ENST00000459667 OR2AG2A6NM03 316 aa20.42■□□□□ 0.86
VARS-218ENST00000459667 AGAP14A8MT82 685 aa20.42■□□□□ 0.86
VARS-218ENST00000459667 H7C0S8 307 aa20.42■□□□□ 0.86
VARS-218ENST00000459667 KIR2DS3K7RE56 304 aa20.42■□□□□ 0.86
VARS-218ENST00000459667 CES2O00748 559 aa20.42■□□□□ 0.86
VARS-218ENST00000459667 B4GAT1O43505 415 aa20.42■□□□□ 0.86
VARS-218ENST00000459667 GPR3P46089 330 aa20.42■□□□□ 0.86
VARS-218ENST00000459667 OR1D5P58170 312 aa20.42■□□□□ 0.86
VARS-218ENST00000459667 HHEXQ03014 270 aa20.42■□□□□ 0.86
VARS-218ENST00000459667 KIR2DS5Q14953 304 aa20.42■□□□□ 0.86
VARS-218ENST00000459667 AMZ1Q400G9 498 aa20.42■□□□□ 0.86
VARS-218ENST00000459667 CCDC38Q502W7 563 aa20.42■□□□□ 0.86
VARS-218ENST00000459667 TMEM220Q6QAJ8 160 aa20.42■□□□□ 0.86
VARS-218ENST00000459667 SLC9B2Q86UD5 537 aa20.42■□□□□ 0.86
VARS-218ENST00000459667 COG1Q8WTW3 980 aa20.42■□□□□ 0.86
VARS-218ENST00000459667 AP1M1Q9BXS5 423 aa20.42■□□□□ 0.86
VARS-218ENST00000459667 FAM96AQ9H5X1 160 aa20.42■□□□□ 0.86
VARS-218ENST00000459667 CASS4Q9NQ75 786 aa20.42■□□□□ 0.86
VARS-218ENST00000459667 EIF2B3Q9NR50 452 aaKnown RBP20.42■□□□□ 0.86
VARS-218ENST00000459667 SMARCAL1Q9NZC9 954 aa20.42■□□□□ 0.86
VARS-218ENST00000459667 SNX12Q9UMY4 172 aa20.42■□□□□ 0.86
VARS-218ENST00000459667 EPG5Q9HCE0 2579 aa20.42■□□□□ 0.86
VARS-218ENST00000459667 UNC13CQ8NB66 2214 aa20.42■□□□□ 0.86
VARS-218ENST00000459667 HEATR9A2RTY3 570 aa20.41■□□□□ 0.86
VARS-218ENST00000459667 MROH6A6NGR9 719 aa20.41■□□□□ 0.86
VARS-218ENST00000459667 PRR19A6NJB7 356 aa20.41■□□□□ 0.86
VARS-218ENST00000459667 OR5K4A6NMS3 321 aa20.41■□□□□ 0.86
VARS-218ENST00000459667 PDZK1P1A8MUH7 402 aa20.41■□□□□ 0.86
VARS-218ENST00000459667 TAF4O00268 1085 aa20.41■□□□□ 0.86
VARS-218ENST00000459667 MPOP05164 745 aa20.41■□□□□ 0.86
VARS-218ENST00000459667 TCP1P17987 556 aaKnown RBP20.41■□□□□ 0.86
VARS-218ENST00000459667 IDSP22304 550 aa20.41■□□□□ 0.86
VARS-218ENST00000459667 GABREP78334 506 aa20.41■□□□□ 0.86
VARS-218ENST00000459667 SEPT7Q16181 437 aaKnown RBP20.41■□□□□ 0.86
VARS-218ENST00000459667 MAP9Q49MG5 647 aa20.41■□□□□ 0.86
VARS-218ENST00000459667 ZRANB3Q5FWF4 1079 aa20.41■□□□□ 0.86
VARS-218ENST00000459667 C3orf38Q5JPI3 329 aa20.41■□□□□ 0.86
VARS-218ENST00000459667 CHCHD2P9Q5T1J5 151 aaPredicted RBP20.41■□□□□ 0.86
VARS-218ENST00000459667 TTC27Q6P3X3 843 aa20.41■□□□□ 0.86
VARS-218ENST00000459667 DET1Q7L5Y6 550 aa20.41■□□□□ 0.86
VARS-218ENST00000459667 B3GNT8Q7Z7M8 397 aa20.41■□□□□ 0.86
VARS-218ENST00000459667 NXPE1Q8N323 547 aa20.41■□□□□ 0.86
VARS-218ENST00000459667 MAGOHBQ96A72 148 aaKnown RBP20.41■□□□□ 0.86
VARS-218ENST00000459667 ZNF514Q96K75 400 aaPredicted RBP20.41■□□□□ 0.86
VARS-218ENST00000459667 TMEM74Q96NL1 305 aa20.41■□□□□ 0.86
VARS-218ENST00000459667 FOXP3Q9BZS1 431 aa20.41■□□□□ 0.86
VARS-218ENST00000459667 SARS2Q9NP81 518 aaKnown RBP20.41■□□□□ 0.86
VARS-218ENST00000459667 KCNK4Q9NYG8 393 aa20.41■□□□□ 0.86
VARS-218ENST00000459667 USP24Q9UPU5 2620 aa20.41■□□□□ 0.86
VARS-218ENST00000459667 GOLGA6L10A0A0M3HER8 536 aa20.4■□□□□ 0.86
VARS-218ENST00000459667 BRINP1O60477 761 aa20.4■□□□□ 0.86
VARS-218ENST00000459667 POP7O75817 140 aaKnown RBP20.4■□□□□ 0.86
VARS-218ENST00000459667 RALBP11234 206 aa20.4■□□□□ 0.86
VARS-218ENST00000459667 INHBCP55103 352 aa20.4■□□□□ 0.86
VARS-218ENST00000459667 LAMB3Q13751 1172 aa20.4■□□□□ 0.86
VARS-218ENST00000459667 TRIP13Q15645 432 aaPredicted RBP20.4■□□□□ 0.86
VARS-218ENST00000459667 KCTD19Q17RG1 926 aaPredicted RBP20.4■□□□□ 0.86
VARS-218ENST00000459667 SKIDA1Q1XH10 827 aa20.4■□□□□ 0.86
VARS-218ENST00000459667 GPR33Q49SQ1 333 aa20.4■□□□□ 0.86
VARS-218ENST00000459667 FNBP1LQ5T0N5 605 aa20.4■□□□□ 0.86
VARS-218ENST00000459667 MICALCLQ6ZW33 695 aa20.4■□□□□ 0.86
VARS-218ENST00000459667 AMZ2Q86W34 360 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms