RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 DNASE1L3Q13609 305 aa10.26□□□□□ -0.77
HDLBP-227ENST00000458564 ERV3-1Q14264 604 aa10.26□□□□□ -0.77
HDLBP-227ENST00000458564 PDK2Q15119 407 aa10.26□□□□□ -0.77
HDLBP-227ENST00000458564 INSCQ1MX18 579 aa10.26□□□□□ -0.77
HDLBP-227ENST00000458564 TDRD12Q587J7 1177 aaKnown RBP10.26□□□□□ -0.77
HDLBP-227ENST00000458564 ADGRG6Q86SQ4 1221 aa10.26□□□□□ -0.77
HDLBP-227ENST00000458564 LRRTM4Q86VH4 590 aa10.26□□□□□ -0.77
HDLBP-227ENST00000458564 PPP1R3BQ86XI6 285 aa10.26□□□□□ -0.77
HDLBP-227ENST00000458564 RASGRP3Q8IV61 690 aa10.26□□□□□ -0.77
HDLBP-227ENST00000458564 ZNF547Q8IVP9 402 aa10.26□□□□□ -0.77
HDLBP-227ENST00000458564 TRIM48Q8IWZ4 208 aa10.26□□□□□ -0.77
HDLBP-227ENST00000458564 TRAM1L1Q8N609 369 aa10.26□□□□□ -0.77
HDLBP-227ENST00000458564 PQLC3Q8N755 202 aa10.26□□□□□ -0.77
HDLBP-227ENST00000458564 GPR26Q8NDV2 337 aa10.26□□□□□ -0.77
HDLBP-227ENST00000458564 RSC1A1Q92681 617 aa10.26□□□□□ -0.77
HDLBP-227ENST00000458564 SYN2Q92777 582 aaPredicted RBP10.26□□□□□ -0.77
HDLBP-227ENST00000458564 ZDHHC12Q96GR4 267 aa10.26□□□□□ -0.77
HDLBP-227ENST00000458564 FCRL4Q96PJ5 515 aa10.26□□□□□ -0.77
HDLBP-227ENST00000458564 SPATA16Q9BXB7 569 aa10.26□□□□□ -0.77
HDLBP-227ENST00000458564 NAT10Q9H0A0 1025 aaKnown RBP10.26□□□□□ -0.77
HDLBP-227ENST00000458564 MAGEE1Q9HCI5 957 aa10.26□□□□□ -0.77
HDLBP-227ENST00000458564 SLC40A1Q9NP59 571 aa10.26□□□□□ -0.77
HDLBP-227ENST00000458564 LHX9Q9NQ69 397 aa10.26□□□□□ -0.77
HDLBP-227ENST00000458564 DTLQ9NZJ0 730 aa10.26□□□□□ -0.77
HDLBP-227ENST00000458564 PADI1Q9ULC6 663 aa10.26□□□□□ -0.77
HDLBP-227ENST00000458564 A0A1W2PQJ5 194 aa10.25□□□□□ -0.77
HDLBP-227ENST00000458564 PDZK1P1A8MUH7 402 aa10.25□□□□□ -0.77
HDLBP-227ENST00000458564 KCNK1O00180 336 aa10.25□□□□□ -0.77
HDLBP-227ENST00000458564 RASSF9O75901 435 aa10.25□□□□□ -0.77
HDLBP-227ENST00000458564 KRT7P08729 469 aa10.25□□□□□ -0.77
HDLBP-227ENST00000458564 CCNYL3P0C7X3 344 aa10.25□□□□□ -0.77
HDLBP-227ENST00000458564 SEPHS1P49903 392 aa10.25□□□□□ -0.77
HDLBP-227ENST00000458564 MLLT10P55197 1068 aa10.25□□□□□ -0.77
HDLBP-227ENST00000458564 PPIDQ08752 370 aaKnown RBP10.25□□□□□ -0.77
HDLBP-227ENST00000458564 SLC10A2Q12908 348 aaPredicted RBP10.25□□□□□ -0.77
HDLBP-227ENST00000458564 SEMA5AQ13591 1074 aa10.25□□□□□ -0.77
HDLBP-227ENST00000458564 GPR18Q14330 331 aa10.25□□□□□ -0.77
HDLBP-227ENST00000458564 GALNT3Q14435 633 aa10.25□□□□□ -0.77
HDLBP-227ENST00000458564 SLC14A2Q15849 920 aa10.25□□□□□ -0.77
HDLBP-227ENST00000458564 ATP13A4Q4VNC1 1196 aa10.25□□□□□ -0.77
HDLBP-227ENST00000458564 ZNF648Q5T619 568 aaPredicted RBP10.25□□□□□ -0.77
HDLBP-227ENST00000458564 CRTC3Q6UUV7 619 aa10.25□□□□□ -0.77
HDLBP-227ENST00000458564 TMC3Q7Z5M5 1100 aa10.25□□□□□ -0.77
HDLBP-227ENST00000458564 C11orf96Q7Z7L8 435 aa10.25□□□□□ -0.77
HDLBP-227ENST00000458564 MAP7D3Q8IWC1 876 aa10.25□□□□□ -0.77
HDLBP-227ENST00000458564 CNTD1Q8N815 330 aa10.25□□□□□ -0.77
HDLBP-227ENST00000458564 GALNT11Q8NCW6 608 aa10.25□□□□□ -0.77
HDLBP-227ENST00000458564 TADA1Q96BN2 335 aa10.25□□□□□ -0.77
HDLBP-227ENST00000458564 SLC41A2Q96JW4 573 aa10.25□□□□□ -0.77
HDLBP-227ENST00000458564 VPS35Q96QK1 796 aa10.25□□□□□ -0.77
HDLBP-227ENST00000458564 XPO4Q9C0E2 1151 aaKnown RBP10.25□□□□□ -0.77
HDLBP-227ENST00000458564 TWSG1Q9GZX9 223 aa10.25□□□□□ -0.77
HDLBP-227ENST00000458564 ARFGAP3Q9NP61 516 aa10.25□□□□□ -0.77
HDLBP-227ENST00000458564 LNPEPQ9UIQ6 1025 aa10.25□□□□□ -0.77
HDLBP-227ENST00000458564 TLK1Q9UKI8 766 aa10.25□□□□□ -0.77
HDLBP-227ENST00000458564 PIPSLA2A3N6 862 aa10.24□□□□□ -0.77
HDLBP-227ENST00000458564 CDC14CA4D256 554 aa10.24□□□□□ -0.77
HDLBP-227ENST00000458564 OR52A4PA6NMU1 304 aa10.24□□□□□ -0.77
HDLBP-227ENST00000458564 ZNF487B1APH4 448 aa10.24□□□□□ -0.77
HDLBP-227ENST00000458564 KIF1CO43896 1103 aaKnown RBP10.24□□□□□ -0.77
HDLBP-227ENST00000458564 KATNA1O75449 491 aa10.24□□□□□ -0.77
HDLBP-227ENST00000458564 PROSCO94903 275 aa10.24□□□□□ -0.77
HDLBP-227ENST00000458564 TIAF1O95411 115 aa10.24□□□□□ -0.77
HDLBP-227ENST00000458564 JCHAINP01591 159 aa10.24□□□□□ -0.77
HDLBP-227ENST00000458564 PDGFAP04085 211 aa10.24□□□□□ -0.77
HDLBP-227ENST00000458564 IDSP22304 550 aa10.24□□□□□ -0.77
HDLBP-227ENST00000458564 CASP14P31944 242 aa10.24□□□□□ -0.77
HDLBP-227ENST00000458564 ZBTB17Q13105 803 aa10.24□□□□□ -0.77
HDLBP-227ENST00000458564 TUBB3Q13509 450 aa10.24□□□□□ -0.77
HDLBP-227ENST00000458564 LAMB3Q13751 1172 aa10.24□□□□□ -0.77
HDLBP-227ENST00000458564 SEPT7Q16181 437 aaKnown RBP10.24□□□□□ -0.77
HDLBP-227ENST00000458564 UGT8Q16880 541 aa10.24□□□□□ -0.77
HDLBP-227ENST00000458564 PLA2G4EQ3MJ16 856 aa10.24□□□□□ -0.77
HDLBP-227ENST00000458564 ANO6Q4KMQ2 910 aa10.24□□□□□ -0.77
HDLBP-227ENST00000458564 KHDC1Q4VXA5 237 aaKnown RBP10.24□□□□□ -0.77
HDLBP-227ENST00000458564 C4orf17Q53FE4 359 aa10.24□□□□□ -0.77
HDLBP-227ENST00000458564 CACHD1Q5VU97 1274 aa10.24□□□□□ -0.77
HDLBP-227ENST00000458564 PAPD7Q5XG87 772 aaKnown RBP10.24□□□□□ -0.77
HDLBP-227ENST00000458564 ALS2CLQ60I27 953 aa10.24□□□□□ -0.77
HDLBP-227ENST00000458564 CAPRIN2Q6IMN6 1127 aaKnown RBP10.24□□□□□ -0.77
HDLBP-227ENST00000458564 TMEM135Q86UB9 458 aa10.24□□□□□ -0.77
HDLBP-227ENST00000458564 BPHLQ86WA6 291 aaPredicted RBP10.24□□□□□ -0.77
HDLBP-227ENST00000458564 VSIG1Q86XK7 387 aa10.24□□□□□ -0.77
HDLBP-227ENST00000458564 KCTD6Q8NC69 237 aa10.24□□□□□ -0.77
HDLBP-227ENST00000458564 CCNYQ8ND76 341 aa10.24□□□□□ -0.77
HDLBP-227ENST00000458564 CT55Q8WUE5 264 aa10.24□□□□□ -0.77
HDLBP-227ENST00000458564 THAP4Q8WY91 577 aa10.24□□□□□ -0.77
HDLBP-227ENST00000458564 UBXN4Q92575 508 aa10.24□□□□□ -0.77
HDLBP-227ENST00000458564 IMP4Q96G21 291 aaKnown RBP10.24□□□□□ -0.77
HDLBP-227ENST00000458564 ZNF830Q96NB3 372 aaPredicted RBP10.24□□□□□ -0.77
HDLBP-227ENST00000458564 NAP1L5Q96NT1 182 aaPredicted RBP10.24□□□□□ -0.77
HDLBP-227ENST00000458564 SRPK1Q96SB4 655 aaKnown RBP10.24□□□□□ -0.77
HDLBP-227ENST00000458564 GPR87Q9BY21 358 aa10.24□□□□□ -0.77
HDLBP-227ENST00000458564 ACTL8Q9H568 366 aa10.24□□□□□ -0.77
HDLBP-227ENST00000458564 LRRC4CQ9HCJ2 640 aa10.24□□□□□ -0.77
HDLBP-227ENST00000458564 PDE7BQ9NP56 450 aa10.24□□□□□ -0.77
HDLBP-227ENST00000458564 MLXIPLQ9NP71 852 aa10.24□□□□□ -0.77
HDLBP-227ENST00000458564 LCMT1Q9UIC8 334 aa10.24□□□□□ -0.77
HDLBP-227ENST00000458564 SHOC2Q9UQ13 582 aa10.24□□□□□ -0.77
HDLBP-227ENST00000458564 DNAJC16Q9Y2G8 782 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms