RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 CSPG4P5Q96PW8 444 aa19.52■□□□□ 0.71
SNX27-204ENST00000458013 SLC39A8Q9C0K1 460 aa19.52■□□□□ 0.71
SNX27-204ENST00000458013 FADS3Q9Y5Q0 445 aa19.52■□□□□ 0.71
SNX27-204ENST00000458013 GSC2O15499 205 aa19.51■□□□□ 0.71
SNX27-204ENST00000458013 UGT2B11O75310 529 aa19.51■□□□□ 0.71
SNX27-204ENST00000458013 METTL18O95568 372 aa19.51■□□□□ 0.71
SNX27-204ENST00000458013 IRF9Q00978 393 aa19.51■□□□□ 0.71
SNX27-204ENST00000458013 SLC25A52Q3SY17 297 aa19.51■□□□□ 0.71
SNX27-204ENST00000458013 DIRAS2Q96HU8 199 aa19.51■□□□□ 0.71
SNX27-204ENST00000458013 ZNF570Q96NI8 536 aa19.51■□□□□ 0.71
SNX27-204ENST00000458013 AGAP2Q99490 1192 aa19.51■□□□□ 0.71
SNX27-204ENST00000458013 KIAA1522Q9P206 1035 aaPredicted RBP19.51■□□□□ 0.71
SNX27-204ENST00000458013 ZNF536O15090 1300 aa19.51■□□□□ 0.71
SNX27-204ENST00000458013 C1RP00736 705 aa19.51■□□□□ 0.71
SNX27-204ENST00000458013 GBE1Q04446 702 aa19.51■□□□□ 0.71
SNX27-204ENST00000458013 C17orf64Q86WR6 236 aa19.51■□□□□ 0.71
SNX27-204ENST00000458013 RPL10LQ96L21 214 aaKnown RBP19.51■□□□□ 0.71
SNX27-204ENST00000458013 CDK15Q96Q40 435 aa19.51■□□□□ 0.71
SNX27-204ENST00000458013 MAPRE3Q9UPY8 281 aa19.51■□□□□ 0.71
SNX27-204ENST00000458013 SLC9A3R1O14745 358 aaPredicted RBP19.51■□□□□ 0.71
SNX27-204ENST00000458013 OR1F1O43749 312 aa19.51■□□□□ 0.71
SNX27-204ENST00000458013 CSN2P05814 226 aa19.51■□□□□ 0.71
SNX27-204ENST00000458013 IL23RQ5VWK5 629 aa19.51■□□□□ 0.71
SNX27-204ENST00000458013 CPSF7Q8N684 471 aaKnown RBP19.51■□□□□ 0.71
SNX27-204ENST00000458013 ZNF781Q8N8C0 355 aa19.51■□□□□ 0.71
SNX27-204ENST00000458013 NAXEQ8NCW5 288 aa19.51■□□□□ 0.71
SNX27-204ENST00000458013 LPGAT1Q92604 370 aa19.51■□□□□ 0.71
SNX27-204ENST00000458013 HSFY1Q96LI6 401 aa19.51■□□□□ 0.71
SNX27-204ENST00000458013 UCKL1Q9NWZ5 548 aa19.51■□□□□ 0.71
SNX27-204ENST00000458013 PLLPQ9Y342 182 aa19.51■□□□□ 0.71
SNX27-204ENST00000458013 TELO2Q9Y4R8 837 aa19.51■□□□□ 0.71
SNX27-204ENST00000458013 ARL5AQ9Y689 179 aa19.51■□□□□ 0.71
SNX27-204ENST00000458013 MT-CYBP00156 380 aaPredicted RBP19.51■□□□□ 0.71
SNX27-204ENST00000458013 FCER2P06734 321 aa19.51■□□□□ 0.71
SNX27-204ENST00000458013 CRYBB1P53674 252 aaPredicted RBP19.51■□□□□ 0.71
SNX27-204ENST00000458013 YIPF4Q9BSR8 244 aa19.51■□□□□ 0.71
SNX27-204ENST00000458013 PCDHGC4Q9Y5F7 938 aa19.51■□□□□ 0.71
SNX27-204ENST00000458013 TGFB1I1O43294 461 aa19.51■□□□□ 0.71
SNX27-204ENST00000458013 EDF1O60869 148 aaKnown RBP19.51■□□□□ 0.71
SNX27-204ENST00000458013 GOT2P00505 430 aaKnown RBP19.51■□□□□ 0.71
SNX27-204ENST00000458013 IFNGP01579 166 aa19.51■□□□□ 0.71
SNX27-204ENST00000458013 DNASE1L1P49184 302 aa19.51■□□□□ 0.71
SNX27-204ENST00000458013 COL9A3Q14050 684 aaPredicted RBP19.51■□□□□ 0.71
SNX27-204ENST00000458013 S100ZQ8WXG8 99 aa19.51■□□□□ 0.71
SNX27-204ENST00000458013 FEM1AQ9BSK4 669 aa19.51■□□□□ 0.71
SNX27-204ENST00000458013 HTATIP2Q9BUP3 242 aa19.51■□□□□ 0.71
SNX27-204ENST00000458013 A0A0G2JN53 185 aa19.5■□□□□ 0.71
SNX27-204ENST00000458013 UGT1A9O60656 530 aa19.5■□□□□ 0.71
SNX27-204ENST00000458013 IFNA6P05013 189 aa19.5■□□□□ 0.71
SNX27-204ENST00000458013 KCNA5P22460 613 aa19.5■□□□□ 0.71
SNX27-204ENST00000458013 CDH12P55289 794 aa19.5■□□□□ 0.71
SNX27-204ENST00000458013 SMU1Q2TAY7 513 aa19.5■□□□□ 0.71
SNX27-204ENST00000458013 CAPN13Q6MZZ7 669 aaPredicted RBP19.5■□□□□ 0.71
SNX27-204ENST00000458013 SLC51AQ86UW1 340 aa19.5■□□□□ 0.71
SNX27-204ENST00000458013 DEFB118Q96PH6 123 aa19.5■□□□□ 0.71
SNX27-204ENST00000458013 IPPKQ9H8X2 491 aa19.5■□□□□ 0.71
SNX27-204ENST00000458013 UGT1A7Q9HAW7 530 aa19.5■□□□□ 0.71
SNX27-204ENST00000458013 UGT1A10Q9HAW8 530 aa19.5■□□□□ 0.71
SNX27-204ENST00000458013 UGT1A8Q9HAW9 530 aa19.5■□□□□ 0.71
SNX27-204ENST00000458013 C3orf14Q9HBI5 128 aa19.5■□□□□ 0.71
SNX27-204ENST00000458013 ZNF224Q9NZL3 707 aa19.5■□□□□ 0.71
SNX27-204ENST00000458013 ZNF180Q9UJW8 692 aa19.5■□□□□ 0.71
SNX27-204ENST00000458013 GRM6O15303 877 aa19.5■□□□□ 0.71
SNX27-204ENST00000458013 FGBP02675 491 aa19.5■□□□□ 0.71
SNX27-204ENST00000458013 MNDAP41218 407 aa19.5■□□□□ 0.71
SNX27-204ENST00000458013 SLC5A3P53794 718 aa19.5■□□□□ 0.71
SNX27-204ENST00000458013 TOP1MTQ969P6 601 aa19.5■□□□□ 0.71
SNX27-204ENST00000458013 CCDC85CA6NKD9 419 aa19.5■□□□□ 0.71
SNX27-204ENST00000458013 XKRYO14609 159 aa19.5■□□□□ 0.71
SNX27-204ENST00000458013 ATXN7L2Q5T6C5 722 aaPredicted RBP19.5■□□□□ 0.71
SNX27-204ENST00000458013 PQLC1Q8N2U9 271 aa19.5■□□□□ 0.71
SNX27-204ENST00000458013 EXD2Q9NVH0 621 aa19.5■□□□□ 0.71
SNX27-204ENST00000458013 MFHAS1Q9Y4C4 1052 aa19.5■□□□□ 0.71
SNX27-204ENST00000458013 EPHX1P07099 455 aa19.5■□□□□ 0.71
SNX27-204ENST00000458013 FMO3P31513 532 aa19.5■□□□□ 0.71
SNX27-204ENST00000458013 TGFBR2P37173 567 aa19.5■□□□□ 0.71
SNX27-204ENST00000458013 MAGEL2Q9UJ55 1249 aa19.5■□□□□ 0.71
SNX27-204ENST00000458013 HCN1O60741 890 aa19.5■□□□□ 0.71
SNX27-204ENST00000458013 C22orf31O95567 290 aa19.5■□□□□ 0.71
SNX27-204ENST00000458013 MINDY4Q4G0A6 757 aa19.5■□□□□ 0.71
SNX27-204ENST00000458013 SPATA31C2B4DYI2 1134 aa19.49■□□□□ 0.71
SNX27-204ENST00000458013 ADH1AP07327 375 aa19.49■□□□□ 0.71
SNX27-204ENST00000458013 RPL17P18621 184 aaKnown RBP19.49■□□□□ 0.71
SNX27-204ENST00000458013 CRHR1P34998 444 aa19.49■□□□□ 0.71
SNX27-204ENST00000458013 ARHGDIBP52566 201 aa19.49■□□□□ 0.71
SNX27-204ENST00000458013 LIPEQ05469 1076 aa19.49■□□□□ 0.71
SNX27-204ENST00000458013 CRY2Q49AN0 593 aa19.49■□□□□ 0.71
SNX27-204ENST00000458013 BBS12Q6ZW61 710 aa19.49■□□□□ 0.71
SNX27-204ENST00000458013 BEND5Q7L4P6 421 aa19.49■□□□□ 0.71
SNX27-204ENST00000458013 PIWIL4Q7Z3Z4 852 aaKnown RBP19.49■□□□□ 0.71
SNX27-204ENST00000458013 SNX33Q8WV41 574 aa19.49■□□□□ 0.71
SNX27-204ENST00000458013 TBATAQ96M53 351 aa19.49■□□□□ 0.71
SNX27-204ENST00000458013 EIF2B4Q9UI10 523 aaKnown RBP19.49■□□□□ 0.71
SNX27-204ENST00000458013 H3BM21 787 aa19.49■□□□□ 0.71
SNX27-204ENST00000458013 CCNKO75909 580 aa19.49■□□□□ 0.71
SNX27-204ENST00000458013 ITGB5P18084 799 aa19.49■□□□□ 0.71
SNX27-204ENST00000458013 SPATA19Q7Z5L4 167 aa19.49■□□□□ 0.71
SNX27-204ENST00000458013 ZNF280BQ86YH2 543 aa19.49■□□□□ 0.71
SNX27-204ENST00000458013 ZNF615Q8N8J6 731 aa19.49■□□□□ 0.71
SNX27-204ENST00000458013 OR2T34Q8NGX1 318 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms