RNA–Protein interactions for RNA: ENST00000456953.5

SNHG17-208, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 3 BASIC

Gene SNHG17, Length 546 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-208ENST00000456953 DCHS2Q6V1P9 2916 aa12.97□□□□□ -0.33
SNHG17-208ENST00000456953 A0A0U1RQS6 177 aa12.97□□□□□ -0.33
SNHG17-208ENST00000456953 SSU72P8A0A1W2PR75 194 aa12.97□□□□□ -0.33
SNHG17-208ENST00000456953 TCRBV5S1A1TA0A578 114 aa12.97□□□□□ -0.33
SNHG17-208ENST00000456953 KRT86O43790 486 aa12.97□□□□□ -0.33
SNHG17-208ENST00000456953 TIAF1O95411 115 aa12.97□□□□□ -0.33
SNHG17-208ENST00000456953 SERPING1P05155 500 aa12.97□□□□□ -0.33
SNHG17-208ENST00000456953 SKILP12757 684 aa12.97□□□□□ -0.33
SNHG17-208ENST00000456953 ERCC2P18074 760 aa12.97□□□□□ -0.33
SNHG17-208ENST00000456953 NELFEP18615 380 aaKnown RBP12.97□□□□□ -0.33
SNHG17-208ENST00000456953 XRCC1P18887 633 aaPredicted RBP12.97□□□□□ -0.33
SNHG17-208ENST00000456953 LPOP22079 712 aaPredicted RBP12.97□□□□□ -0.33
SNHG17-208ENST00000456953 RPL7AP62424 266 aaKnown RBP12.97□□□□□ -0.33
SNHG17-208ENST00000456953 PTSQ03393 145 aa12.97□□□□□ -0.33
SNHG17-208ENST00000456953 IL10RAQ13651 578 aa12.97□□□□□ -0.33
SNHG17-208ENST00000456953 LAMB3Q13751 1172 aa12.97□□□□□ -0.33
SNHG17-208ENST00000456953 NAA30Q147X3 362 aaPredicted RBP12.97□□□□□ -0.33
SNHG17-208ENST00000456953 CACHD1Q5VU97 1274 aa12.97□□□□□ -0.33
SNHG17-208ENST00000456953 E4F1Q66K89 784 aaPredicted RBP12.97□□□□□ -0.33
SNHG17-208ENST00000456953 IRF2BP2Q7Z5L9 587 aa12.97□□□□□ -0.33
SNHG17-208ENST00000456953 PGBD5Q8N414 524 aa12.97□□□□□ -0.33
SNHG17-208ENST00000456953 RBMXL3Q8N7X1 1067 aaKnown RBP12.97□□□□□ -0.33
SNHG17-208ENST00000456953 PIH1D2Q8WWB5 315 aa12.97□□□□□ -0.33
SNHG17-208ENST00000456953 MARVELD3Q96A59 401 aa12.97□□□□□ -0.33
SNHG17-208ENST00000456953 C19orf60Q96EN9 201 aa12.97□□□□□ -0.33
SNHG17-208ENST00000456953 ZDHHC12Q96GR4 267 aa12.97□□□□□ -0.33
SNHG17-208ENST00000456953 PLEKHG4BQ96PX9 1271 aa12.97□□□□□ -0.33
SNHG17-208ENST00000456953 PANX2Q96RD6 677 aa12.97□□□□□ -0.33
SNHG17-208ENST00000456953 MGME1Q9BQP7 344 aa12.97□□□□□ -0.33
SNHG17-208ENST00000456953 CNOT6Q9ULM6 557 aaKnown RBP12.97□□□□□ -0.33
SNHG17-208ENST00000456953 AKAP9Q99996 3911 aa12.96□□□□□ -0.33
SNHG17-208ENST00000456953 KIF1CO43896 1103 aaKnown RBP12.96□□□□□ -0.33
SNHG17-208ENST00000456953 PEX11BO96011 259 aa12.96□□□□□ -0.33
SNHG17-208ENST00000456953 VIPP01282 170 aa12.96□□□□□ -0.33
SNHG17-208ENST00000456953 PRF1P14222 555 aa12.96□□□□□ -0.33
SNHG17-208ENST00000456953 HNRNPH3P31942 346 aaKnown RBP12.96□□□□□ -0.33
SNHG17-208ENST00000456953 PRKCIP41743 596 aa12.96□□□□□ -0.33
SNHG17-208ENST00000456953 PTGIRP43119 386 aa12.96□□□□□ -0.33
SNHG17-208ENST00000456953 CAPZBP47756 277 aa12.96□□□□□ -0.33
SNHG17-208ENST00000456953 CLCNKAP51800 687 aa12.96□□□□□ -0.33
SNHG17-208ENST00000456953 STC1P52823 247 aa12.96□□□□□ -0.33
SNHG17-208ENST00000456953 PDE1BQ01064 536 aa12.96□□□□□ -0.33
SNHG17-208ENST00000456953 TUBB3Q13509 450 aa12.96□□□□□ -0.33
SNHG17-208ENST00000456953 CA9Q16790 459 aa12.96□□□□□ -0.33
SNHG17-208ENST00000456953 CLEC16AQ2KHT3 1053 aa12.96□□□□□ -0.33
SNHG17-208ENST00000456953 PPP1R15BQ5SWA1 713 aa12.96□□□□□ -0.33
SNHG17-208ENST00000456953 PWWP2BQ6NUJ5 590 aa12.96□□□□□ -0.33
SNHG17-208ENST00000456953 MON1BQ7L1V2 547 aa12.96□□□□□ -0.33
SNHG17-208ENST00000456953 BPHLQ86WA6 291 aaPredicted RBP12.96□□□□□ -0.33
SNHG17-208ENST00000456953 TRIM48Q8IWZ4 208 aa12.96□□□□□ -0.33
SNHG17-208ENST00000456953 RAVER1Q8IY67 606 aaKnown RBP12.96□□□□□ -0.33
SNHG17-208ENST00000456953 IQCKQ8N0W5 287 aa12.96□□□□□ -0.33
SNHG17-208ENST00000456953 BBS5Q8N3I7 341 aa12.96□□□□□ -0.33
SNHG17-208ENST00000456953 FDCSPQ8NFU4 85 aa12.96□□□□□ -0.33
SNHG17-208ENST00000456953 SNRNP40Q96DI7 357 aaKnown RBP12.96□□□□□ -0.33
SNHG17-208ENST00000456953 PCDHB18PQ96TA0 734 aa12.96□□□□□ -0.33
SNHG17-208ENST00000456953 AGPAT1Q99943 283 aa12.96□□□□□ -0.33
SNHG17-208ENST00000456953 DEF6Q9H4E7 631 aa12.96□□□□□ -0.33
SNHG17-208ENST00000456953 HAUS4Q9H6D7 363 aa12.96□□□□□ -0.33
SNHG17-208ENST00000456953 AKIRIN1Q9H9L7 192 aaPredicted RBP12.96□□□□□ -0.33
SNHG17-208ENST00000456953 RARRES3Q9UL19 164 aa12.96□□□□□ -0.33
SNHG17-208ENST00000456953 DNPEPQ9ULA0 475 aa12.96□□□□□ -0.33
SNHG17-208ENST00000456953 ENTPD4Q9Y227 616 aa12.96□□□□□ -0.33
SNHG17-208ENST00000456953 FARSAQ9Y285 508 aaKnown RBP12.96□□□□□ -0.33
SNHG17-208ENST00000456953 CCDC168Q8NDH2 2452 aa12.96□□□□□ -0.34
SNHG17-208ENST00000456953 DIDO1Q9BTC0 2240 aaKnown RBP12.95□□□□□ -0.34
SNHG17-208ENST00000456953 ANKUB1A6NFN9 424 aa12.95□□□□□ -0.34
SNHG17-208ENST00000456953 GRID2O43424 1007 aa12.95□□□□□ -0.34
SNHG17-208ENST00000456953 NRDCO43847 1150 aa12.95□□□□□ -0.34
SNHG17-208ENST00000456953 GRNP28799 593 aaKnown RBP12.95□□□□□ -0.34
SNHG17-208ENST00000456953 HCAR3P49019 387 aa12.95□□□□□ -0.34
SNHG17-208ENST00000456953 ZNF135P52742 658 aaPredicted RBP12.95□□□□□ -0.34
SNHG17-208ENST00000456953 ITGA1P56199 1179 aa12.95□□□□□ -0.34
SNHG17-208ENST00000456953 ELOAQ14241 798 aaKnown RBP12.95□□□□□ -0.34
SNHG17-208ENST00000456953 ERMARDQ5T6L9 678 aa12.95□□□□□ -0.34
SNHG17-208ENST00000456953 FAM199XQ6PEV8 388 aaPredicted RBP12.95□□□□□ -0.34
SNHG17-208ENST00000456953 DCUN1D2Q6PH85 259 aa12.95□□□□□ -0.34
SNHG17-208ENST00000456953 FAM92BQ6ZTR7 304 aa12.95□□□□□ -0.34
SNHG17-208ENST00000456953 RSC1A1Q92681 617 aa12.95□□□□□ -0.34
SNHG17-208ENST00000456953 SLC41A2Q96JW4 573 aa12.95□□□□□ -0.34
SNHG17-208ENST00000456953 KCTD15Q96SI1 283 aaPredicted RBP12.95□□□□□ -0.34
SNHG17-208ENST00000456953 NUDT9Q9BW91 350 aa12.95□□□□□ -0.34
SNHG17-208ENST00000456953 RAB33BQ9H082 229 aa12.95□□□□□ -0.34
SNHG17-208ENST00000456953 CARD9Q9H257 536 aa12.95□□□□□ -0.34
SNHG17-208ENST00000456953 OSGEPL1Q9H4B0 414 aa12.95□□□□□ -0.34
SNHG17-208ENST00000456953 ASF1BQ9NVP2 202 aa12.95□□□□□ -0.34
SNHG17-208ENST00000456953 GPR83Q9NYM4 423 aa12.95□□□□□ -0.34
SNHG17-208ENST00000456953 EPHA6Q9UF33 1036 aa12.95□□□□□ -0.34
SNHG17-208ENST00000456953 A0A0J9YYE9 177 aa12.94□□□□□ -0.34
SNHG17-208ENST00000456953 NUAK1O60285 661 aa12.94□□□□□ -0.34
SNHG17-208ENST00000456953 FZD6O60353 706 aa12.94□□□□□ -0.34
SNHG17-208ENST00000456953 TMEM63AO94886 807 aa12.94□□□□□ -0.34
SNHG17-208ENST00000456953 TRBC1P01850 177 aa12.94□□□□□ -0.34
SNHG17-208ENST00000456953 PDHA1P08559 390 aa12.94□□□□□ -0.34
SNHG17-208ENST00000456953 SLC19A1P41440 591 aa12.94□□□□□ -0.34
SNHG17-208ENST00000456953 MAXP61244 160 aa12.94□□□□□ -0.34
SNHG17-208ENST00000456953 OGDHQ02218 1023 aa12.94□□□□□ -0.34
SNHG17-208ENST00000456953 DPYSQ14117 519 aa12.94□□□□□ -0.34
SNHG17-208ENST00000456953 PPP6R3Q5H9R7 873 aaPredicted RBP12.94□□□□□ -0.34
SNHG17-208ENST00000456953 IZUMO3Q5VZ72 239 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms