RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 PPP2R2BQ00005 443 aa10.22□□□□□ -0.77
CLIP4-208ENST00000456385 EMX2Q04743 252 aa10.22□□□□□ -0.77
CLIP4-208ENST00000456385 SLC14A2Q15849 920 aa10.22□□□□□ -0.77
CLIP4-208ENST00000456385 SPATS1Q496A3 300 aa10.22□□□□□ -0.77
CLIP4-208ENST00000456385 FBXO47Q5MNV8 452 aa10.22□□□□□ -0.77
CLIP4-208ENST00000456385 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.22□□□□□ -0.77
CLIP4-208ENST00000456385 UBE2UQ5VVX9 321 aa10.22□□□□□ -0.77
CLIP4-208ENST00000456385 STEAP3Q658P3 488 aa10.22□□□□□ -0.77
CLIP4-208ENST00000456385 SPESP1Q6UW49 350 aa10.22□□□□□ -0.77
CLIP4-208ENST00000456385 PAQR9Q6ZVX9 377 aa10.22□□□□□ -0.77
CLIP4-208ENST00000456385 BEND5Q7L4P6 421 aa10.22□□□□□ -0.77
CLIP4-208ENST00000456385 P2RY8Q86VZ1 359 aa10.22□□□□□ -0.77
CLIP4-208ENST00000456385 GALNT13Q8IUC8 556 aa10.22□□□□□ -0.77
CLIP4-208ENST00000456385 POC5Q8NA72 575 aa10.22□□□□□ -0.77
CLIP4-208ENST00000456385 FBXO30Q8TB52 745 aa10.22□□□□□ -0.77
CLIP4-208ENST00000456385 MCOLN3Q8TDD5 553 aa10.22□□□□□ -0.77
CLIP4-208ENST00000456385 RORBQ92753 470 aa10.22□□□□□ -0.77
CLIP4-208ENST00000456385 NTAN1Q96AB6 310 aa10.22□□□□□ -0.77
CLIP4-208ENST00000456385 MRGPRX2Q96LB1 330 aa10.22□□□□□ -0.77
CLIP4-208ENST00000456385 FCRL5Q96RD9 977 aa10.22□□□□□ -0.77
CLIP4-208ENST00000456385 COLEC11Q9BWP8 271 aa10.22□□□□□ -0.77
CLIP4-208ENST00000456385 OSBPL10Q9BXB5 764 aa10.22□□□□□ -0.77
CLIP4-208ENST00000456385 ULBP1Q9BZM6 244 aa10.22□□□□□ -0.77
CLIP4-208ENST00000456385 DSN1Q9H410 356 aa10.22□□□□□ -0.77
CLIP4-208ENST00000456385 GLOD4Q9HC38 313 aa10.22□□□□□ -0.77
CLIP4-208ENST00000456385 PRDM8Q9NQV8 689 aa10.22□□□□□ -0.77
CLIP4-208ENST00000456385 HOXC10Q9NYD6 342 aa10.22□□□□□ -0.77
CLIP4-208ENST00000456385 MARCH4Q9P2E8 410 aaPredicted RBP10.22□□□□□ -0.77
CLIP4-208ENST00000456385 INTS6Q9UL03 887 aaKnown RBP10.22□□□□□ -0.77
CLIP4-208ENST00000456385 NAALAD2Q9Y3Q0 740 aa10.22□□□□□ -0.77
CLIP4-208ENST00000456385 U3KQV3 271 aa10.22□□□□□ -0.77
CLIP4-208ENST00000456385 CITO14578 2027 aa10.22□□□□□ -0.77
CLIP4-208ENST00000456385 ILVBLA1L0T0 632 aa10.22□□□□□ -0.77
CLIP4-208ENST00000456385 ASNA1O43681 348 aa10.22□□□□□ -0.77
CLIP4-208ENST00000456385 HS6ST1O60243 411 aa10.22□□□□□ -0.77
CLIP4-208ENST00000456385 MGEA5O60502 916 aa10.22□□□□□ -0.77
CLIP4-208ENST00000456385 USP2O75604 605 aaPredicted RBP10.22□□□□□ -0.77
CLIP4-208ENST00000456385 GOT2P00505 430 aaKnown RBP10.22□□□□□ -0.77
CLIP4-208ENST00000456385 CST1P01037 141 aa10.22□□□□□ -0.77
CLIP4-208ENST00000456385 NPR3P17342 541 aa10.22□□□□□ -0.77
CLIP4-208ENST00000456385 ITGB6P18564 788 aa10.22□□□□□ -0.77
CLIP4-208ENST00000456385 AKAP5P24588 427 aa10.22□□□□□ -0.77
CLIP4-208ENST00000456385 MZF1P28698 734 aaPredicted RBP10.22□□□□□ -0.77
CLIP4-208ENST00000456385 HOXD11P31277 338 aaPredicted RBP10.22□□□□□ -0.77
CLIP4-208ENST00000456385 FMO3P31513 532 aa10.22□□□□□ -0.77
CLIP4-208ENST00000456385 SERPINB10P48595 397 aa10.22□□□□□ -0.77
CLIP4-208ENST00000456385 CLCN5P51795 746 aa10.22□□□□□ -0.77
CLIP4-208ENST00000456385 PPP5CP53041 499 aa10.22□□□□□ -0.77
CLIP4-208ENST00000456385 CHRNB3Q05901 458 aa10.22□□□□□ -0.77
CLIP4-208ENST00000456385 CXCL9Q07325 125 aa10.22□□□□□ -0.77
CLIP4-208ENST00000456385 SCAPQ12770 1279 aa10.22□□□□□ -0.77
CLIP4-208ENST00000456385 ZBTB6Q15916 424 aa10.22□□□□□ -0.77
CLIP4-208ENST00000456385 FAM98BQ52LJ0 330 aaKnown RBP10.22□□□□□ -0.77
CLIP4-208ENST00000456385 INTS6LQ5JSJ4 861 aaKnown RBP10.22□□□□□ -0.77
CLIP4-208ENST00000456385 CLEC20AQ6ZU45 233 aa10.22□□□□□ -0.77
CLIP4-208ENST00000456385 GPRIN1Q7Z2K8 1008 aa10.22□□□□□ -0.77
CLIP4-208ENST00000456385 KRT27Q7Z3Y8 459 aa10.22□□□□□ -0.77
CLIP4-208ENST00000456385 TMEM179BQ7Z7N9 219 aa10.22□□□□□ -0.77
CLIP4-208ENST00000456385 SAPCD2Q86UD0 394 aa10.22□□□□□ -0.77
CLIP4-208ENST00000456385 OSTM1Q86WC4 334 aa10.22□□□□□ -0.77
CLIP4-208ENST00000456385 CILP2Q8IUL8 1156 aa10.22□□□□□ -0.77
CLIP4-208ENST00000456385 FBXO16Q8IX29 292 aaPredicted RBP10.22□□□□□ -0.77
CLIP4-208ENST00000456385 DCBLD1Q8N8Z6 715 aa10.22□□□□□ -0.77
CLIP4-208ENST00000456385 B3GALNT2Q8NCR0 500 aa10.22□□□□□ -0.77
CLIP4-208ENST00000456385 FAM83FQ8NEG4 500 aaPredicted RBP10.22□□□□□ -0.77
CLIP4-208ENST00000456385 OR6P1Q8NGX9 317 aa10.22□□□□□ -0.77
CLIP4-208ENST00000456385 LILRB4Q8NHJ6 448 aa10.22□□□□□ -0.77
CLIP4-208ENST00000456385 FIG4Q92562 907 aa10.22□□□□□ -0.77
CLIP4-208ENST00000456385 ISG20Q96AZ6 181 aaKnown RBP10.22□□□□□ -0.77
CLIP4-208ENST00000456385 ZNF300Q96RE9 604 aaPredicted RBP10.22□□□□□ -0.77
CLIP4-208ENST00000456385 SLC9A7Q96T83 725 aa10.22□□□□□ -0.77
CLIP4-208ENST00000456385 ACOX2Q99424 681 aa10.22□□□□□ -0.77
CLIP4-208ENST00000456385 FEM1AQ9BSK4 669 aa10.22□□□□□ -0.77
CLIP4-208ENST00000456385 WDCPQ9H6R7 721 aa10.22□□□□□ -0.77
CLIP4-208ENST00000456385 NEK6Q9HC98 313 aa10.22□□□□□ -0.77
CLIP4-208ENST00000456385 CPNE5Q9HCH3 593 aa10.22□□□□□ -0.77
CLIP4-208ENST00000456385 NECTIN3Q9NQS3 549 aa10.22□□□□□ -0.77
CLIP4-208ENST00000456385 LEF1Q9UJU2 399 aaPredicted RBP10.22□□□□□ -0.77
CLIP4-208ENST00000456385 NUDT5Q9UKK9 219 aa10.22□□□□□ -0.77
CLIP4-208ENST00000456385 DNAH12Q6ZR08 3092 aa10.22□□□□□ -0.77
CLIP4-208ENST00000456385 UPK1BO75841 260 aa10.21□□□□□ -0.77
CLIP4-208ENST00000456385 ANXA9O76027 345 aa10.21□□□□□ -0.77
CLIP4-208ENST00000456385 WISP3O95389 354 aaPredicted RBP10.21□□□□□ -0.77
CLIP4-208ENST00000456385 HLA-DQB2P05538 268 aa10.21□□□□□ -0.77
CLIP4-208ENST00000456385 ENO2P09104 434 aaPredicted RBP10.21□□□□□ -0.77
CLIP4-208ENST00000456385 USP17L7P0C7H9 530 aa10.21□□□□□ -0.77
CLIP4-208ENST00000456385 CD1DP15813 335 aa10.21□□□□□ -0.77
CLIP4-208ENST00000456385 IGFBP6P24592 240 aaPredicted RBP10.21□□□□□ -0.77
CLIP4-208ENST00000456385 ACVR2AP27037 513 aa10.21□□□□□ -0.77
CLIP4-208ENST00000456385 PSMB9P28065 219 aa10.21□□□□□ -0.77
CLIP4-208ENST00000456385 ARSDP51689 593 aa10.21□□□□□ -0.77
CLIP4-208ENST00000456385 CDC20Q12834 499 aa10.21□□□□□ -0.77
CLIP4-208ENST00000456385 CDK5R2Q13319 367 aa10.21□□□□□ -0.77
CLIP4-208ENST00000456385 FXNQ16595 210 aa10.21□□□□□ -0.77
CLIP4-208ENST00000456385 VARS2Q5ST30 1063 aaKnown RBP10.21□□□□□ -0.77
CLIP4-208ENST00000456385 GJC2Q5T442 439 aaPredicted RBP10.21□□□□□ -0.77
CLIP4-208ENST00000456385 LAIR1Q6GTX8 287 aa10.21□□□□□ -0.77
CLIP4-208ENST00000456385 DESI1Q6ICB0 168 aa10.21□□□□□ -0.77
CLIP4-208ENST00000456385 RANBP10Q6VN20 620 aa10.21□□□□□ -0.77
CLIP4-208ENST00000456385 TAS2R42Q7RTR8 314 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms