RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 DOK6Q6PKX4 331 aa4.68□□□□□ -1.66
GTF3C3-208ENST00000455546 ZNF574Q6ZN55 896 aaPredicted RBP4.68□□□□□ -1.66
GTF3C3-208ENST00000455546 Q6ZVL8 140 aa4.68□□□□□ -1.66
GTF3C3-208ENST00000455546 DPPA4Q7L190 304 aa4.68□□□□□ -1.66
GTF3C3-208ENST00000455546 HSD11B1LQ7Z5J1 315 aa4.68□□□□□ -1.66
GTF3C3-208ENST00000455546 POLNQ7Z5Q5 900 aa4.68□□□□□ -1.66
GTF3C3-208ENST00000455546 TSPAN33Q86UF1 283 aa4.68□□□□□ -1.66
GTF3C3-208ENST00000455546 HEATR4Q86WZ0 1026 aa4.68□□□□□ -1.66
GTF3C3-208ENST00000455546 ZFAND4Q86XD8 727 aa4.68□□□□□ -1.66
GTF3C3-208ENST00000455546 ZNF761Q86XN6 746 aaPredicted RBP4.68□□□□□ -1.66
GTF3C3-208ENST00000455546 NRROSQ86YC3 692 aa4.68□□□□□ -1.66
GTF3C3-208ENST00000455546 CBARPQ8N350 705 aaPredicted RBP4.68□□□□□ -1.66
GTF3C3-208ENST00000455546 LRRN4CLQ8ND94 238 aa4.68□□□□□ -1.66
GTF3C3-208ENST00000455546 RCBTB1Q8NDN9 531 aa4.68□□□□□ -1.66
GTF3C3-208ENST00000455546 GIMAP7Q8NHV1 300 aa4.68□□□□□ -1.66
GTF3C3-208ENST00000455546 FNIP1Q8TF40 1166 aa4.68□□□□□ -1.66
GTF3C3-208ENST00000455546 USP7Q93009 1102 aa4.68□□□□□ -1.66
GTF3C3-208ENST00000455546 ECHDC3Q96DC8 303 aa4.68□□□□□ -1.66
GTF3C3-208ENST00000455546 TBATAQ96M53 351 aa4.68□□□□□ -1.66
GTF3C3-208ENST00000455546 COQ10AQ96MF6 247 aa4.68□□□□□ -1.66
GTF3C3-208ENST00000455546 PSKH2Q96QS6 385 aa4.68□□□□□ -1.66
GTF3C3-208ENST00000455546 AGAP2Q99490 1192 aa4.68□□□□□ -1.66
GTF3C3-208ENST00000455546 PRDM14Q9GZV8 571 aa4.68□□□□□ -1.66
GTF3C3-208ENST00000455546 THAP2Q9H0W7 228 aa4.68□□□□□ -1.66
GTF3C3-208ENST00000455546 CARS2Q9HA77 564 aaKnown RBP4.68□□□□□ -1.66
GTF3C3-208ENST00000455546 NOD2Q9HC29 1040 aa4.68□□□□□ -1.66
GTF3C3-208ENST00000455546 GP6Q9HCN6 339 aa4.68□□□□□ -1.66
GTF3C3-208ENST00000455546 GOLGA6AQ9NYA3 693 aa4.68□□□□□ -1.66
GTF3C3-208ENST00000455546 PCDHGA8Q9Y5G5 932 aa4.68□□□□□ -1.66
GTF3C3-208ENST00000455546 DGKBQ9Y6T7 804 aa4.68□□□□□ -1.66
GTF3C3-208ENST00000455546 MGAQ8IWI9 3026 aa4.68□□□□□ -1.66
GTF3C3-208ENST00000455546 CCDC88CQ9P219 2028 aa4.68□□□□□ -1.66
GTF3C3-208ENST00000455546 IGSF10Q6WRI0 2623 aa4.68□□□□□ -1.66
GTF3C3-208ENST00000455546 SMG1Q96Q15 3661 aaKnown RBP4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 A0A087X0T9 212 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 PRSS38A1L453 326 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 CFAP69A5D8W1 941 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 NPIPB15A6NHN6 443 aaPredicted RBP4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 SMTNL1A8MU46 457 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 D6RAR5 112 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 GOLGA6L22H0YM25 854 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 INPP4BO15327 924 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 HTRA2O43464 458 aaPredicted RBP4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 HEXIM1O94992 359 aaKnown RBP4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 PGLSO95336 258 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 SERPINC1P01008 464 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 ITGA2BP08514 1039 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 FAM153BP0C7A2 387 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 JMJD7P0C870 316 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 FAM228BP0C875 321 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 CCNB1P14635 433 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 WT1P19544 449 aaPredicted RBP4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 FSTP19883 344 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 LHCGRP22888 699 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 VIPR1P32241 457 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 HTR7P34969 479 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 GJC1P36383 396 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 ARL4AP40617 200 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 PRKCIP41743 596 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 SSR1P43307 286 aaKnown RBP4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 MMP13P45452 471 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 RENBPP51606 427 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 CDH6P55285 790 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 KIAA1024LP59773 190 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 AP1S1P61966 158 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 CDK3Q00526 305 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 NFKB2Q00653 900 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 RHDQ02161 417 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 DSC2Q02487 901 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 ZFP36L1Q07352 338 aaKnown RBP4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 SQSTM1Q13501 440 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 PIGHQ14442 188 aaPredicted RBP4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 HLTFQ14527 1009 aaKnown RBP eCLIP4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 ZNF235Q14590 738 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 RFTN1Q14699 578 aaPredicted RBP4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 C16orf72Q14CZ0 275 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 IQCB1Q15051 598 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 DPYSL2Q16555 572 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 LINC00303Q3SY05 128 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 C14orf28Q4W4Y0 310 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 BOLA3Q53S33 107 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 CERCAMQ5T4B2 595 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 MARC1Q5VT66 337 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 RAET1GQ6H3X3 334 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 CAVIN1Q6NZI2 390 aaKnown RBP4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 SLC30A9Q6PML9 568 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 TMCO3Q6UWJ1 677 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 ZNF662Q6ZS27 426 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 B4GALNT4Q76KP1 1039 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 MARK2Q7KZI7 788 aaKnown RBP4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 FAM214BQ7L5A3 538 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 SPRED1Q7Z699 444 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 TECPR1Q7Z6L1 1165 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 CLEC14AQ86T13 490 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 TRIM74Q86UV6 250 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 VASH2Q86V25 355 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 LUZP1Q86V48 1076 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 ZNF227Q86WZ6 799 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 NAGSQ8N159 534 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 LZTR1Q8N653 840 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms