RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 LCA5LO95447 670 aa5.89□□□□□ -1.47
HLA-DPA3-207ENST00000454398 VIPP01282 170 aa5.89□□□□□ -1.47
HLA-DPA3-207ENST00000454398 C9P02748 559 aa5.89□□□□□ -1.47
HLA-DPA3-207ENST00000454398 ANKRD34CP0C6C1 535 aa5.89□□□□□ -1.47
HLA-DPA3-207ENST00000454398 ZNF30P17039 623 aa5.89□□□□□ -1.47
HLA-DPA3-207ENST00000454398 AMD1P17707 334 aa5.89□□□□□ -1.47
HLA-DPA3-207ENST00000454398 CDK11BP21127 795 aaKnown RBP5.89□□□□□ -1.47
HLA-DPA3-207ENST00000454398 HNRNPH3P31942 346 aaKnown RBP5.89□□□□□ -1.47
HLA-DPA3-207ENST00000454398 MAN1A1P33908 653 aa5.89□□□□□ -1.47
HLA-DPA3-207ENST00000454398 SERPINB6P35237 376 aa5.89□□□□□ -1.47
HLA-DPA3-207ENST00000454398 PCK1P35558 622 aa5.89□□□□□ -1.47
HLA-DPA3-207ENST00000454398 SLC19A1P41440 591 aa5.89□□□□□ -1.47
HLA-DPA3-207ENST00000454398 NOP2P46087 812 aaKnown RBP5.89□□□□□ -1.47
HLA-DPA3-207ENST00000454398 CD97P48960 835 aa5.89□□□□□ -1.47
HLA-DPA3-207ENST00000454398 HCAR3P49019 387 aa5.89□□□□□ -1.47
HLA-DPA3-207ENST00000454398 ZNF165P49910 485 aa5.89□□□□□ -1.47
HLA-DPA3-207ENST00000454398 PGDP52209 483 aa5.89□□□□□ -1.47
HLA-DPA3-207ENST00000454398 EPHA4P54764 986 aa5.89□□□□□ -1.47
HLA-DPA3-207ENST00000454398 KLHL30Q0D2K2 578 aa5.89□□□□□ -1.47
HLA-DPA3-207ENST00000454398 SLC10A2Q12908 348 aaPredicted RBP5.89□□□□□ -1.47
HLA-DPA3-207ENST00000454398 LAMB3Q13751 1172 aa5.89□□□□□ -1.47
HLA-DPA3-207ENST00000454398 KIR2DS5Q14953 304 aa5.89□□□□□ -1.47
HLA-DPA3-207ENST00000454398 PLCL1Q15111 1095 aa5.89□□□□□ -1.47
HLA-DPA3-207ENST00000454398 LLGL1Q15334 1064 aa5.89□□□□□ -1.47
HLA-DPA3-207ENST00000454398 GPR19Q15760 415 aa5.89□□□□□ -1.47
HLA-DPA3-207ENST00000454398 CACHD1Q5VU97 1274 aa5.89□□□□□ -1.47
HLA-DPA3-207ENST00000454398 ALG1LQ6GMV1 187 aa5.89□□□□□ -1.47
HLA-DPA3-207ENST00000454398 LCN10Q6JVE6 187 aa5.89□□□□□ -1.47
HLA-DPA3-207ENST00000454398 TCTN3Q6NUS6 607 aa5.89□□□□□ -1.47
HLA-DPA3-207ENST00000454398 NPNTQ6UXI9 565 aa5.89□□□□□ -1.47
HLA-DPA3-207ENST00000454398 FAM83HQ6ZRV2 1179 aaPredicted RBP5.89□□□□□ -1.47
HLA-DPA3-207ENST00000454398 TMEM26Q6ZUK4 368 aa5.89□□□□□ -1.47
HLA-DPA3-207ENST00000454398 ADGRG6Q86SQ4 1221 aa5.89□□□□□ -1.47
HLA-DPA3-207ENST00000454398 PLXDC1Q8IUK5 500 aa5.89□□□□□ -1.47
HLA-DPA3-207ENST00000454398 LZTR1Q8N653 840 aa5.89□□□□□ -1.47
HLA-DPA3-207ENST00000454398 TEX26Q8N6G2 289 aa5.89□□□□□ -1.47
HLA-DPA3-207ENST00000454398 PQLC3Q8N755 202 aa5.89□□□□□ -1.47
HLA-DPA3-207ENST00000454398 EFCAB3Q8N7B9 438 aa5.89□□□□□ -1.47
HLA-DPA3-207ENST00000454398 ANKRD20A12PQ8NF67 263 aa5.89□□□□□ -1.47
HLA-DPA3-207ENST00000454398 MAML1Q92585 1016 aa5.89□□□□□ -1.47
HLA-DPA3-207ENST00000454398 DPYSL5Q9BPU6 564 aa5.89□□□□□ -1.47
HLA-DPA3-207ENST00000454398 MLPHQ9BV36 600 aaPredicted RBP5.89□□□□□ -1.47
HLA-DPA3-207ENST00000454398 TLR10Q9BXR5 811 aa5.89□□□□□ -1.47
HLA-DPA3-207ENST00000454398 PACSIN1Q9BY11 444 aa5.89□□□□□ -1.47
HLA-DPA3-207ENST00000454398 FAM83DQ9H4H8 585 aa5.89□□□□□ -1.47
HLA-DPA3-207ENST00000454398 ZNF768Q9H5H4 540 aaKnown RBP5.89□□□□□ -1.47
HLA-DPA3-207ENST00000454398 BPIFA1Q9NP55 256 aa5.89□□□□□ -1.47
HLA-DPA3-207ENST00000454398 LMBRD1Q9NUN5 540 aa5.89□□□□□ -1.47
HLA-DPA3-207ENST00000454398 UBP1Q9NZI7 540 aa5.89□□□□□ -1.47
HLA-DPA3-207ENST00000454398 CHMP5Q9NZZ3 219 aa5.89□□□□□ -1.47
HLA-DPA3-207ENST00000454398 TMPRSS11EQ9UL52 423 aa5.89□□□□□ -1.47
HLA-DPA3-207ENST00000454398 ZNF711Q9Y462 761 aa5.89□□□□□ -1.47
HLA-DPA3-207ENST00000454398 KCTD3Q9Y597 815 aa5.89□□□□□ -1.47
HLA-DPA3-207ENST00000454398 SCINQ9Y6U3 715 aa5.89□□□□□ -1.47
HLA-DPA3-207ENST00000454398 CNTRLQ7Z7A1 2325 aa5.89□□□□□ -1.47
HLA-DPA3-207ENST00000454398 OTOGQ6ZRI0 2925 aa5.89□□□□□ -1.47
HLA-DPA3-207ENST00000454398 CELSR1Q9NYQ6 3014 aa5.89□□□□□ -1.47
HLA-DPA3-207ENST00000454398 MDC1Q14676 2089 aaKnown RBP5.89□□□□□ -1.47
HLA-DPA3-207ENST00000454398 SNRNP200O75643 2136 aaKnown RBP5.89□□□□□ -1.47
HLA-DPA3-207ENST00000454398 FBN2P35556 2912 aa5.88□□□□□ -1.47
HLA-DPA3-207ENST00000454398 MTORP42345 2549 aa5.88□□□□□ -1.47
HLA-DPA3-207ENST00000454398 PIKFYVEQ9Y2I7 2098 aa5.88□□□□□ -1.47
HLA-DPA3-207ENST00000454398 A0A1W2PQ67 120 aa5.88□□□□□ -1.47
HLA-DPA3-207ENST00000454398 OR2AG2A6NM03 316 aa5.88□□□□□ -1.47
HLA-DPA3-207ENST00000454398 VPS4BO75351 444 aa5.88□□□□□ -1.47
HLA-DPA3-207ENST00000454398 SPAG6O75602 509 aa5.88□□□□□ -1.47
HLA-DPA3-207ENST00000454398 CREG1O75629 220 aa5.88□□□□□ -1.47
HLA-DPA3-207ENST00000454398 SORBS2O94875 1100 aaKnown RBP5.88□□□□□ -1.47
HLA-DPA3-207ENST00000454398 SLC25A14O95258 325 aaPredicted RBP5.88□□□□□ -1.47
HLA-DPA3-207ENST00000454398 CLDN1O95832 211 aa5.88□□□□□ -1.47
HLA-DPA3-207ENST00000454398 JCHAINP01591 159 aa5.88□□□□□ -1.47
HLA-DPA3-207ENST00000454398 ZNF7P17097 686 aaPredicted RBP5.88□□□□□ -1.47
HLA-DPA3-207ENST00000454398 BPIP17213 487 aa5.88□□□□□ -1.47
HLA-DPA3-207ENST00000454398 NFKBIAP25963 317 aa5.88□□□□□ -1.47
HLA-DPA3-207ENST00000454398 CHRNA4P43681 627 aa5.88□□□□□ -1.47
HLA-DPA3-207ENST00000454398 CCL11P51671 97 aa5.88□□□□□ -1.47
HLA-DPA3-207ENST00000454398 ARSEP51690 589 aa5.88□□□□□ -1.47
HLA-DPA3-207ENST00000454398 CTSCP53634 463 aa5.88□□□□□ -1.47
HLA-DPA3-207ENST00000454398 DYNLT1P63172 113 aa5.88□□□□□ -1.47
HLA-DPA3-207ENST00000454398 MC1RQ01726 317 aa5.88□□□□□ -1.47
HLA-DPA3-207ENST00000454398 TYRO3Q06418 890 aa5.88□□□□□ -1.47
HLA-DPA3-207ENST00000454398 ABRQ12979 859 aa5.88□□□□□ -1.47
HLA-DPA3-207ENST00000454398 GPS2Q13227 327 aa5.88□□□□□ -1.47
HLA-DPA3-207ENST00000454398 EIF2S3LQ2VIR3 472 aaKnown RBP5.88□□□□□ -1.47
HLA-DPA3-207ENST00000454398 PTCHD3Q3KNS1 767 aa5.88□□□□□ -1.47
HLA-DPA3-207ENST00000454398 ANO6Q4KMQ2 910 aa5.88□□□□□ -1.47
HLA-DPA3-207ENST00000454398 ANKRD20A8PQ5CZ79 823 aa5.88□□□□□ -1.47
HLA-DPA3-207ENST00000454398 ZFYVE27Q5T4F4 411 aa5.88□□□□□ -1.47
HLA-DPA3-207ENST00000454398 FAM151BQ6UXP7 276 aa5.88□□□□□ -1.47
HLA-DPA3-207ENST00000454398 RBM43Q6ZSC3 357 aaKnown RBP5.88□□□□□ -1.47
HLA-DPA3-207ENST00000454398 DET1Q7L5Y6 550 aa5.88□□□□□ -1.47
HLA-DPA3-207ENST00000454398 PRSS42Q7Z5A4 293 aa5.88□□□□□ -1.47
HLA-DPA3-207ENST00000454398 PPP1R3BQ86XI6 285 aa5.88□□□□□ -1.47
HLA-DPA3-207ENST00000454398 PSTKQ8IV42 348 aaKnown RBP5.88□□□□□ -1.47
HLA-DPA3-207ENST00000454398 BEND7Q8N7W2 519 aaPredicted RBP5.88□□□□□ -1.47
HLA-DPA3-207ENST00000454398 CNTD1Q8N815 330 aa5.88□□□□□ -1.47
HLA-DPA3-207ENST00000454398 Q8NA96 180 aa5.88□□□□□ -1.47
HLA-DPA3-207ENST00000454398 SLC38A9Q8NBW4 561 aa5.88□□□□□ -1.47
HLA-DPA3-207ENST00000454398 CCNYQ8ND76 341 aa5.88□□□□□ -1.47
HLA-DPA3-207ENST00000454398 SPDYE1Q8NFV5 336 aaPredicted RBP5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms