RNA–Protein interactions for RNA: ENST00000454181.6

LYSMD2-202, Transcript of LysM domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LYSMD2, Length 1,228 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-202ENST00000454181 FAF2Q96CS3 445 aa23.37■■□□□ 1.33
LYSMD2-202ENST00000454181 CXorf40BQ96DE9 158 aa23.37■■□□□ 1.33
LYSMD2-202ENST00000454181 ZNF768Q9H5H4 540 aaKnown RBP23.37■■□□□ 1.33
LYSMD2-202ENST00000454181 MAGEE1Q9HCI5 957 aa23.37■■□□□ 1.33
LYSMD2-202ENST00000454181 POT1Q9NUX5 634 aa23.37■■□□□ 1.33
LYSMD2-202ENST00000454181 SLC23A2Q9UGH3 650 aa23.37■■□□□ 1.33
LYSMD2-202ENST00000454181 LCMT1Q9UIC8 334 aa23.37■■□□□ 1.33
LYSMD2-202ENST00000454181 PLAAQ9Y263 795 aa23.37■■□□□ 1.33
LYSMD2-202ENST00000454181 HEY1Q9Y5J3 304 aa23.37■■□□□ 1.33
LYSMD2-202ENST00000454181 CHUKO15111 745 aa23.36■■□□□ 1.33
LYSMD2-202ENST00000454181 VEGFDO43915 354 aa23.36■■□□□ 1.33
LYSMD2-202ENST00000454181 CDK14O94921 469 aa23.36■■□□□ 1.33
LYSMD2-202ENST00000454181 PIRTP0C851 137 aa23.36■■□□□ 1.33
LYSMD2-202ENST00000454181 GP1BBP13224 206 aa23.36■■□□□ 1.33
LYSMD2-202ENST00000454181 LEPRP48357 1165 aaKnown RBP23.36■■□□□ 1.33
LYSMD2-202ENST00000454181 TAS2R40P59535 323 aa23.36■■□□□ 1.33
LYSMD2-202ENST00000454181 IFI35P80217 286 aaPredicted RBP23.36■■□□□ 1.33
LYSMD2-202ENST00000454181 PPIDQ08752 370 aaKnown RBP23.36■■□□□ 1.33
LYSMD2-202ENST00000454181 AP1B1Q10567 949 aa23.36■■□□□ 1.33
LYSMD2-202ENST00000454181 NT5DC3Q86UY8 548 aa23.36■■□□□ 1.33
LYSMD2-202ENST00000454181 RBM12BQ8IXT5 1001 aaKnown RBP23.36■■□□□ 1.33
LYSMD2-202ENST00000454181 FAM26EQ8N5C1 309 aa23.36■■□□□ 1.33
LYSMD2-202ENST00000454181 IQCDQ96DY2 449 aa23.36■■□□□ 1.33
LYSMD2-202ENST00000454181 TIMM29Q9BSF4 260 aa23.36■■□□□ 1.33
LYSMD2-202ENST00000454181 TMEM63CQ9P1W3 806 aa23.36■■□□□ 1.33
LYSMD2-202ENST00000454181 UVRAGQ9P2Y5 699 aa23.36■■□□□ 1.33
LYSMD2-202ENST00000454181 PADI1Q9ULC6 663 aa23.36■■□□□ 1.33
LYSMD2-202ENST00000454181 PIPSLA2A3N6 862 aa23.35■■□□□ 1.33
LYSMD2-202ENST00000454181 MT-ND3P03897 115 aa23.35■■□□□ 1.33
LYSMD2-202ENST00000454181 RPL10P27635 214 aaKnown RBP23.35■■□□□ 1.33
LYSMD2-202ENST00000454181 GTF2H3Q13889 308 aa23.35■■□□□ 1.33
LYSMD2-202ENST00000454181 PCSK7Q16549 785 aa23.35■■□□□ 1.33
LYSMD2-202ENST00000454181 TCTN3Q6NUS6 607 aa23.35■■□□□ 1.33
LYSMD2-202ENST00000454181 IRGCQ6NXR0 463 aa23.35■■□□□ 1.33
LYSMD2-202ENST00000454181 ABRAXAS1Q6UWZ7 409 aa23.35■■□□□ 1.33
LYSMD2-202ENST00000454181 TMC3Q7Z5M5 1100 aa23.35■■□□□ 1.33
LYSMD2-202ENST00000454181 PPP1R3BQ86XI6 285 aa23.35■■□□□ 1.33
LYSMD2-202ENST00000454181 CPNE8Q86YQ8 564 aa23.35■■□□□ 1.33
LYSMD2-202ENST00000454181 CNTD1Q8N815 330 aa23.35■■□□□ 1.33
LYSMD2-202ENST00000454181 CTNNBL1Q8WYA6 563 aaPredicted RBP23.35■■□□□ 1.33
LYSMD2-202ENST00000454181 EID2BQ96D98 161 aa23.35■■□□□ 1.33
LYSMD2-202ENST00000454181 RNF157Q96PX1 679 aa23.35■■□□□ 1.33
LYSMD2-202ENST00000454181 SRPK1Q96SB4 655 aaKnown RBP23.35■■□□□ 1.33
LYSMD2-202ENST00000454181 MAK16Q9BXY0 300 aaKnown RBP23.35■■□□□ 1.33
LYSMD2-202ENST00000454181 TWSG1Q9GZX9 223 aa23.35■■□□□ 1.33
LYSMD2-202ENST00000454181 LUC7L2Q9Y383 392 aaKnown RBP23.35■■□□□ 1.33
LYSMD2-202ENST00000454181 ZNF711Q9Y462 761 aa23.35■■□□□ 1.33
LYSMD2-202ENST00000454181 CDC14CA4D256 554 aa23.34■■□□□ 1.33
LYSMD2-202ENST00000454181 MTX2O75431 263 aa23.34■■□□□ 1.33
LYSMD2-202ENST00000454181 SPAG6O75602 509 aa23.34■■□□□ 1.33
LYSMD2-202ENST00000454181 RFPL1O75677 317 aa23.34■■□□□ 1.33
LYSMD2-202ENST00000454181 H2AFZP0C0S5 128 aa23.34■■□□□ 1.33
LYSMD2-202ENST00000454181 KDELR1P24390 212 aa23.34■■□□□ 1.33
LYSMD2-202ENST00000454181 CASP14P31944 242 aa23.34■■□□□ 1.33
LYSMD2-202ENST00000454181 HALP42357 657 aa23.34■■□□□ 1.33
LYSMD2-202ENST00000454181 CAPZBP47756 277 aa23.34■■□□□ 1.33
LYSMD2-202ENST00000454181 CDK18Q07002 472 aa23.34■■□□□ 1.33
LYSMD2-202ENST00000454181 ZBTB17Q13105 803 aa23.34■■□□□ 1.33
LYSMD2-202ENST00000454181 FAM92BQ6ZTR7 304 aa23.34■■□□□ 1.33
LYSMD2-202ENST00000454181 ASB18Q6ZVZ8 466 aa23.34■■□□□ 1.33
LYSMD2-202ENST00000454181 H2AFVQ71UI9 128 aa23.34■■□□□ 1.33
LYSMD2-202ENST00000454181 PRSS42Q7Z5A4 293 aa23.34■■□□□ 1.33
LYSMD2-202ENST00000454181 GDAP1Q8TB36 358 aa23.34■■□□□ 1.33
LYSMD2-202ENST00000454181 TTC25Q96NG3 672 aa23.34■■□□□ 1.33
LYSMD2-202ENST00000454181 AGAP3Q96P47 875 aa23.34■■□□□ 1.33
LYSMD2-202ENST00000454181 CEP41Q9BYV8 373 aa23.34■■□□□ 1.33
LYSMD2-202ENST00000454181 CBX8Q9HC52 389 aa23.34■■□□□ 1.33
LYSMD2-202ENST00000454181 PDE7BQ9NP56 450 aa23.34■■□□□ 1.33
LYSMD2-202ENST00000454181 SLC40A1Q9NP59 571 aa23.34■■□□□ 1.33
LYSMD2-202ENST00000454181 NFKBIL1Q9UBC1 381 aaPredicted RBP23.34■■□□□ 1.33
LYSMD2-202ENST00000454181 TRIM10Q9UDY6 481 aa23.34■■□□□ 1.33
LYSMD2-202ENST00000454181 CAPN11Q9UMQ6 739 aa23.34■■□□□ 1.33
LYSMD2-202ENST00000454181 LRRD1A4D1F6 860 aa23.33■■□□□ 1.33
LYSMD2-202ENST00000454181 MTSS1O43312 755 aa23.33■■□□□ 1.33
LYSMD2-202ENST00000454181 FGF5P12034 268 aa23.33■■□□□ 1.33
LYSMD2-202ENST00000454181 NR1D1P20393 614 aa23.33■■□□□ 1.33
LYSMD2-202ENST00000454181 DRG2P55039 364 aaKnown RBP23.33■■□□□ 1.33
LYSMD2-202ENST00000454181 AGAP9Q5VTM2 703 aa23.33■■□□□ 1.33
LYSMD2-202ENST00000454181 TRAPPC5Q8IUR0 188 aa23.33■■□□□ 1.33
LYSMD2-202ENST00000454181 RAPGEF5Q92565 580 aa23.33■■□□□ 1.33
LYSMD2-202ENST00000454181 RSC1A1Q92681 617 aa23.33■■□□□ 1.33
LYSMD2-202ENST00000454181 IMP4Q96G21 291 aaKnown RBP23.33■■□□□ 1.33
LYSMD2-202ENST00000454181 TRIB3Q96RU7 358 aa23.33■■□□□ 1.33
LYSMD2-202ENST00000454181 MAN2B2Q9Y2E5 1009 aa23.33■■□□□ 1.33
LYSMD2-202ENST00000454181 OR52A4PA6NMU1 304 aa23.32■■□□□ 1.32
LYSMD2-202ENST00000454181 KIF1CO43896 1103 aaKnown RBP23.32■■□□□ 1.32
LYSMD2-202ENST00000454181 CREG1O75629 220 aa23.32■■□□□ 1.32
LYSMD2-202ENST00000454181 BPIP17213 487 aa23.32■■□□□ 1.32
LYSMD2-202ENST00000454181 UBASH3AP57075 661 aa23.32■■□□□ 1.32
LYSMD2-202ENST00000454181 FANCCQ00597 558 aa23.32■■□□□ 1.32
LYSMD2-202ENST00000454181 DNASE1L3Q13609 305 aa23.32■■□□□ 1.32
LYSMD2-202ENST00000454181 GPR18Q14330 331 aa23.32■■□□□ 1.32
LYSMD2-202ENST00000454181 PDK1Q15118 436 aa23.32■■□□□ 1.32
LYSMD2-202ENST00000454181 LARP7Q4G0J3 582 aaKnown RBP eCLIP23.32■■□□□ 1.32
LYSMD2-202ENST00000454181 ODF2Q5BJF6 829 aa23.32■■□□□ 1.32
LYSMD2-202ENST00000454181 KLHL35Q6PF15 583 aa23.32■■□□□ 1.32
LYSMD2-202ENST00000454181 WASH2PQ6VEQ5 465 aa23.32■■□□□ 1.32
LYSMD2-202ENST00000454181 KLHL6Q8WZ60 621 aa23.32■■□□□ 1.32
LYSMD2-202ENST00000454181 MIB2Q96AX9 1013 aa23.32■■□□□ 1.32
LYSMD2-202ENST00000454181 XPO4Q9C0E2 1151 aaKnown RBP23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms