RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 USP41Q3LFD5 358 aa13.75□□□□□ -0.21
UBE2D3-210ENST00000453744 GPRIN3Q6ZVF9 776 aa13.75□□□□□ -0.21
UBE2D3-210ENST00000453744 GPSM1Q86YR5 675 aa13.75□□□□□ -0.21
UBE2D3-210ENST00000453744 Q8N9G6 341 aaPredicted RBP13.75□□□□□ -0.21
UBE2D3-210ENST00000453744 SMARCD1Q96GM5 515 aa13.75□□□□□ -0.21
UBE2D3-210ENST00000453744 GPR21Q99679 349 aa13.75□□□□□ -0.21
UBE2D3-210ENST00000453744 SMOQ99835 787 aa13.75□□□□□ -0.21
UBE2D3-210ENST00000453744 NEURL2Q9BR09 285 aa13.75□□□□□ -0.21
UBE2D3-210ENST00000453744 AGO3Q9H9G7 860 aaKnown RBP13.75□□□□□ -0.21
UBE2D3-210ENST00000453744 MAGEL2Q9UJ55 1249 aa13.75□□□□□ -0.21
UBE2D3-210ENST00000453744 ITGB1BP2Q9UKP3 347 aa13.75□□□□□ -0.21
UBE2D3-210ENST00000453744 GMPPBQ9Y5P6 360 aa13.75□□□□□ -0.21
UBE2D3-210ENST00000453744 CPQQ9Y646 472 aa13.75□□□□□ -0.21
UBE2D3-210ENST00000453744 BCKDKO14874 412 aa13.74□□□□□ -0.21
UBE2D3-210ENST00000453744 PRKD3O94806 890 aa13.74□□□□□ -0.21
UBE2D3-210ENST00000453744 RCVRNP35243 200 aa13.74□□□□□ -0.21
UBE2D3-210ENST00000453744 YBX1P67809 324 aaKnown RBP13.74□□□□□ -0.21
UBE2D3-210ENST00000453744 C6orf141Q5SZD1 244 aa13.74□□□□□ -0.21
UBE2D3-210ENST00000453744 KCTD11Q693B1 232 aa13.74□□□□□ -0.21
UBE2D3-210ENST00000453744 KIAA0408Q6ZU52 694 aa13.74□□□□□ -0.21
UBE2D3-210ENST00000453744 AHSA2Q719I0 299 aa13.74□□□□□ -0.21
UBE2D3-210ENST00000453744 DET1Q7L5Y6 550 aa13.74□□□□□ -0.21
UBE2D3-210ENST00000453744 CIR1Q86X95 450 aaPredicted RBP13.74□□□□□ -0.21
UBE2D3-210ENST00000453744 TMEM151AQ8N4L1 468 aa13.74□□□□□ -0.21
UBE2D3-210ENST00000453744 LEMD2Q8NC56 503 aa13.74□□□□□ -0.21
UBE2D3-210ENST00000453744 PDPRQ8NCN5 879 aa13.74□□□□□ -0.21
UBE2D3-210ENST00000453744 CHPT1Q8WUD6 406 aa13.74□□□□□ -0.21
UBE2D3-210ENST00000453744 S100ZQ8WXG8 99 aa13.74□□□□□ -0.21
UBE2D3-210ENST00000453744 MAELQ96JY0 434 aaKnown RBP13.74□□□□□ -0.21
UBE2D3-210ENST00000453744 ASB2Q96Q27 587 aa13.74□□□□□ -0.21
UBE2D3-210ENST00000453744 ZNF385DQ9H6B1 395 aa13.74□□□□□ -0.21
UBE2D3-210ENST00000453744 SPATA7Q9P0W8 599 aa13.74□□□□□ -0.21
UBE2D3-210ENST00000453744 POU2F3Q9UKI9 436 aa13.74□□□□□ -0.21
UBE2D3-210ENST00000453744 TPRKBQ9Y3C4 175 aa13.74□□□□□ -0.21
UBE2D3-210ENST00000453744 PCDHGA8Q9Y5G5 932 aa13.74□□□□□ -0.21
UBE2D3-210ENST00000453744 ZNF99A8MXY4 864 aaPredicted RBP13.74□□□□□ -0.21
UBE2D3-210ENST00000453744 J3KR12 359 aa13.74□□□□□ -0.21
UBE2D3-210ENST00000453744 BNIP3LO60238 219 aa13.74□□□□□ -0.21
UBE2D3-210ENST00000453744 VPS26AO75436 327 aa13.74□□□□□ -0.21
UBE2D3-210ENST00000453744 UMPSP11172 480 aa13.74□□□□□ -0.21
UBE2D3-210ENST00000453744 IDUAP35475 653 aa13.74□□□□□ -0.21
UBE2D3-210ENST00000453744 COPZ1P61923 177 aa13.74□□□□□ -0.21
UBE2D3-210ENST00000453744 NCS1P62166 190 aa13.74□□□□□ -0.21
UBE2D3-210ENST00000453744 TSTA3Q13630 321 aaPredicted RBP13.74□□□□□ -0.21
UBE2D3-210ENST00000453744 ANKRD34AQ69YU3 496 aa13.74□□□□□ -0.21
UBE2D3-210ENST00000453744 DSG4Q86SJ6 1040 aa13.74□□□□□ -0.21
UBE2D3-210ENST00000453744 ANKRD46Q86W74 232 aa13.74□□□□□ -0.21
UBE2D3-210ENST00000453744 PROSER1Q86XN7 944 aa13.74□□□□□ -0.21
UBE2D3-210ENST00000453744 SLC9A7Q96T83 725 aa13.74□□□□□ -0.21
UBE2D3-210ENST00000453744 BBS2Q9BXC9 721 aa13.74□□□□□ -0.21
UBE2D3-210ENST00000453744 LRRC3Q9BY71 257 aa13.74□□□□□ -0.21
UBE2D3-210ENST00000453744 SEC22BO75396 215 aa13.74□□□□□ -0.21
UBE2D3-210ENST00000453744 PGLSO95336 258 aa13.74□□□□□ -0.21
UBE2D3-210ENST00000453744 UGT2B4P06133 528 aa13.74□□□□□ -0.21
UBE2D3-210ENST00000453744 SKIV2LQ15477 1246 aaKnown RBP13.74□□□□□ -0.21
UBE2D3-210ENST00000453744 AP5B1Q2VPB7 878 aa13.74□□□□□ -0.21
UBE2D3-210ENST00000453744 SULT1C3Q6IMI6 304 aa13.74□□□□□ -0.21
UBE2D3-210ENST00000453744 ADHFE1Q8IWW8 467 aa13.74□□□□□ -0.21
UBE2D3-210ENST00000453744 MINDY1Q8N5J2 469 aa13.74□□□□□ -0.21
UBE2D3-210ENST00000453744 NTAN1Q96AB6 310 aa13.74□□□□□ -0.21
UBE2D3-210ENST00000453744 SH3YL1Q96HL8 342 aaPredicted RBP13.74□□□□□ -0.21
UBE2D3-210ENST00000453744 WDR6Q9NNW5 1121 aaKnown RBP13.74□□□□□ -0.21
UBE2D3-210ENST00000453744 NRCAMQ92823 1304 aa13.74□□□□□ -0.21
UBE2D3-210ENST00000453744 NDUFB5O43674 189 aa13.73□□□□□ -0.21
UBE2D3-210ENST00000453744 RAP2AP10114 183 aa13.73□□□□□ -0.21
UBE2D3-210ENST00000453744 IGFBP6P24592 240 aaPredicted RBP13.73□□□□□ -0.21
UBE2D3-210ENST00000453744 FAM117BQ6P1L5 589 aa13.73□□□□□ -0.21
UBE2D3-210ENST00000453744 CILP2Q8IUL8 1156 aa13.73□□□□□ -0.21
UBE2D3-210ENST00000453744 MRGPRX2Q96LB1 330 aa13.73□□□□□ -0.21
UBE2D3-210ENST00000453744 CEP44Q9C0F1 390 aa13.73□□□□□ -0.21
UBE2D3-210ENST00000453744 KLQ9UEF7 1012 aa13.73□□□□□ -0.21
UBE2D3-210ENST00000453744 CCDC162PA2VCL2 907 aa13.73□□□□□ -0.21
UBE2D3-210ENST00000453744 A6NL46 340 aa13.73□□□□□ -0.21
UBE2D3-210ENST00000453744 ZNF701M0R085 212 aaPredicted RBP13.73□□□□□ -0.21
UBE2D3-210ENST00000453744 HSD17B1P14061 328 aa13.73□□□□□ -0.21
UBE2D3-210ENST00000453744 BRCC3P46736 316 aa13.73□□□□□ -0.21
UBE2D3-210ENST00000453744 CD47Q08722 323 aa13.73□□□□□ -0.21
UBE2D3-210ENST00000453744 OR4D1Q15615 310 aa13.73□□□□□ -0.21
UBE2D3-210ENST00000453744 EFL1Q7Z2Z2 1120 aaKnown RBP13.73□□□□□ -0.21
UBE2D3-210ENST00000453744 GPR152Q8TDT2 470 aa13.73□□□□□ -0.21
UBE2D3-210ENST00000453744 FRS2Q8WU20 508 aa13.73□□□□□ -0.21
UBE2D3-210ENST00000453744 PSMG2Q969U7 264 aa13.73□□□□□ -0.21
UBE2D3-210ENST00000453744 TMEM125Q96AQ2 219 aa13.73□□□□□ -0.21
UBE2D3-210ENST00000453744 TEX37Q96LM6 180 aa13.73□□□□□ -0.21
UBE2D3-210ENST00000453744 CRTAC1Q9NQ79 661 aa13.73□□□□□ -0.21
UBE2D3-210ENST00000453744 USE1Q9NZ43 259 aa13.73□□□□□ -0.21
UBE2D3-210ENST00000453744 CDH9Q9ULB4 789 aa13.73□□□□□ -0.21
UBE2D3-210ENST00000453744 EIF3LQ9Y262 564 aaKnown RBP13.73□□□□□ -0.21
UBE2D3-210ENST00000453744 COL24A1Q17RW2 1714 aa13.73□□□□□ -0.21
UBE2D3-210ENST00000453744 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.73□□□□□ -0.21
UBE2D3-210ENST00000453744 SH3BGRLO75368 114 aa13.73□□□□□ -0.21
UBE2D3-210ENST00000453744 THP07101 528 aa13.73□□□□□ -0.21
UBE2D3-210ENST00000453744 CAPN1P07384 714 aa13.73□□□□□ -0.21
UBE2D3-210ENST00000453744 ALOX5P09917 674 aa13.73□□□□□ -0.21
UBE2D3-210ENST00000453744 TCEA1P23193 301 aaKnown RBP13.73□□□□□ -0.21
UBE2D3-210ENST00000453744 SCNN1AP37088 669 aa13.73□□□□□ -0.21
UBE2D3-210ENST00000453744 LHX1P48742 406 aa13.73□□□□□ -0.21
UBE2D3-210ENST00000453744 POLD2P49005 469 aa13.73□□□□□ -0.21
UBE2D3-210ENST00000453744 SCNN1GP51170 649 aa13.73□□□□□ -0.21
UBE2D3-210ENST00000453744 NPTX1Q15818 432 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms