RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 RAB6CQ9H0N0 254 aa12.35□□□□□ -0.43
AC004540.1-204ENST00000449537 PDFQ9HBH1 243 aa12.35□□□□□ -0.43
AC004540.1-204ENST00000449537 VPS18Q9P253 973 aa12.35□□□□□ -0.43
AC004540.1-204ENST00000449537 SEMA5BQ9P283 1151 aa12.35□□□□□ -0.43
AC004540.1-204ENST00000449537 TMEM59LQ9UK28 342 aa12.35□□□□□ -0.43
AC004540.1-204ENST00000449537 GOLGA8SH3BPF8 625 aa12.34□□□□□ -0.43
AC004540.1-204ENST00000449537 PRAMEF11O60813 436 aa12.34□□□□□ -0.43
AC004540.1-204ENST00000449537 ATP1A1P05023 1023 aaKnown RBP12.34□□□□□ -0.43
AC004540.1-204ENST00000449537 CAPN1P07384 714 aa12.34□□□□□ -0.43
AC004540.1-204ENST00000449537 PRKCSHP14314 528 aaPredicted RBP12.34□□□□□ -0.43
AC004540.1-204ENST00000449537 FECHP22830 423 aa12.34□□□□□ -0.43
AC004540.1-204ENST00000449537 LHCGRP22888 699 aa12.34□□□□□ -0.43
AC004540.1-204ENST00000449537 SOX8P57073 446 aa12.34□□□□□ -0.43
AC004540.1-204ENST00000449537 TUBB4BP68371 445 aa12.34□□□□□ -0.43
AC004540.1-204ENST00000449537 TYRO3Q06418 890 aa12.34□□□□□ -0.43
AC004540.1-204ENST00000449537 TUBB2AQ13885 445 aa12.34□□□□□ -0.43
AC004540.1-204ENST00000449537 CDO1Q16878 200 aa12.34□□□□□ -0.43
AC004540.1-204ENST00000449537 B3GNTL1Q67FW5 361 aaPredicted RBP12.34□□□□□ -0.43
AC004540.1-204ENST00000449537 TMEM207Q6UWW9 146 aa12.34□□□□□ -0.43
AC004540.1-204ENST00000449537 CERS6Q6ZMG9 384 aa12.34□□□□□ -0.43
AC004540.1-204ENST00000449537 SPOCD1Q6ZMY3 1216 aa12.34□□□□□ -0.43
AC004540.1-204ENST00000449537 RFLNAQ6ZTI6 216 aa12.34□□□□□ -0.43
AC004540.1-204ENST00000449537 MRGPREQ86SM8 312 aa12.34□□□□□ -0.43
AC004540.1-204ENST00000449537 NLRP8Q86W28 1048 aa12.34□□□□□ -0.43
AC004540.1-204ENST00000449537 PHYKPLQ8IUZ5 450 aa12.34□□□□□ -0.43
AC004540.1-204ENST00000449537 TMEM35BQ8NCS4 154 aa12.34□□□□□ -0.43
AC004540.1-204ENST00000449537 CPT1BQ92523 772 aa12.34□□□□□ -0.43
AC004540.1-204ENST00000449537 SPOCK2Q92563 424 aa12.34□□□□□ -0.43
AC004540.1-204ENST00000449537 SCAMP4Q969E2 229 aa12.34□□□□□ -0.43
AC004540.1-204ENST00000449537 CLIP3Q96DZ5 547 aa12.34□□□□□ -0.43
AC004540.1-204ENST00000449537 FAM81BQ96LP2 452 aa12.34□□□□□ -0.43
AC004540.1-204ENST00000449537 PCMTD1Q96MG8 357 aaPredicted RBP12.34□□□□□ -0.43
AC004540.1-204ENST00000449537 BPIFA3Q9BQP9 254 aa12.34□□□□□ -0.43
AC004540.1-204ENST00000449537 TUBB2BQ9BVA1 445 aa12.34□□□□□ -0.43
AC004540.1-204ENST00000449537 CINPQ9BW66 212 aaPredicted RBP12.34□□□□□ -0.43
AC004540.1-204ENST00000449537 RMI1Q9H9A7 625 aa12.34□□□□□ -0.43
AC004540.1-204ENST00000449537 PLCB1Q9NQ66 1216 aa12.34□□□□□ -0.43
AC004540.1-204ENST00000449537 SCHIP1Q9P0W5 487 aaPredicted RBP12.34□□□□□ -0.43
AC004540.1-204ENST00000449537 ZNF624Q9P2J8 865 aaPredicted RBP12.34□□□□□ -0.43
AC004540.1-204ENST00000449537 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.33□□□□□ -0.44
AC004540.1-204ENST00000449537 SYCE3A1L190 88 aa12.33□□□□□ -0.44
AC004540.1-204ENST00000449537 PCDH17O14917 1159 aa12.33□□□□□ -0.44
AC004540.1-204ENST00000449537 FANCGO15287 622 aa12.33□□□□□ -0.44
AC004540.1-204ENST00000449537 CREB3O43889 395 aa12.33□□□□□ -0.44
AC004540.1-204ENST00000449537 FGFR1OPO95684 399 aaKnown RBP12.33□□□□□ -0.44
AC004540.1-204ENST00000449537 AGAP20933 346 aa12.33□□□□□ -0.44
AC004540.1-204ENST00000449537 TNFAIP3P21580 790 aa12.33□□□□□ -0.44
AC004540.1-204ENST00000449537 HADHAP40939 763 aa12.33□□□□□ -0.44
AC004540.1-204ENST00000449537 CLCNKAP51800 687 aa12.33□□□□□ -0.44
AC004540.1-204ENST00000449537 AP1S1P61966 158 aa12.33□□□□□ -0.44
AC004540.1-204ENST00000449537 HSD11B2P80365 405 aa12.33□□□□□ -0.44
AC004540.1-204ENST00000449537 LTBQ06643 244 aa12.33□□□□□ -0.44
AC004540.1-204ENST00000449537 Q0VFX4 171 aa12.33□□□□□ -0.44
AC004540.1-204ENST00000449537 SSPNQ14714 243 aa12.33□□□□□ -0.44
AC004540.1-204ENST00000449537 GFRALQ6UXV0 394 aa12.33□□□□□ -0.44
AC004540.1-204ENST00000449537 ARCQ7LC44 396 aa12.33□□□□□ -0.44
AC004540.1-204ENST00000449537 TSPAN33Q86UF1 283 aa12.33□□□□□ -0.44
AC004540.1-204ENST00000449537 KMT5CQ86Y97 462 aa12.33□□□□□ -0.44
AC004540.1-204ENST00000449537 AOPEPQ8N6M6 819 aa12.33□□□□□ -0.44
AC004540.1-204ENST00000449537 CNDP1Q96KN2 507 aa12.33□□□□□ -0.44
AC004540.1-204ENST00000449537 NSMCE3Q96MG7 304 aa12.33□□□□□ -0.44
AC004540.1-204ENST00000449537 GBP5Q96PP8 586 aa12.33□□□□□ -0.44
AC004540.1-204ENST00000449537 AGAP2Q99490 1192 aa12.33□□□□□ -0.44
AC004540.1-204ENST00000449537 OSGEPL1Q9H4B0 414 aa12.33□□□□□ -0.44
AC004540.1-204ENST00000449537 CATSPERBQ9H7T0 1116 aa12.33□□□□□ -0.44
AC004540.1-204ENST00000449537 ATP13A2Q9NQ11 1180 aa12.33□□□□□ -0.44
AC004540.1-204ENST00000449537 SEMA3GQ9NS98 782 aa12.33□□□□□ -0.44
AC004540.1-204ENST00000449537 PADI2Q9Y2J8 665 aa12.33□□□□□ -0.44
AC004540.1-204ENST00000449537 SIK3Q9Y2K2 1263 aa12.33□□□□□ -0.44
AC004540.1-204ENST00000449537 PCDHGC4Q9Y5F7 938 aa12.33□□□□□ -0.44
AC004540.1-204ENST00000449537 ABCA4P78363 2273 aa12.33□□□□□ -0.44
AC004540.1-204ENST00000449537 TRIM49BA6NDI0 452 aa12.32□□□□□ -0.44
AC004540.1-204ENST00000449537 NPIPB15A6NHN6 443 aaPredicted RBP12.32□□□□□ -0.44
AC004540.1-204ENST00000449537 HTRA2O43464 458 aaPredicted RBP12.32□□□□□ -0.44
AC004540.1-204ENST00000449537 LDB2O43679 373 aa12.32□□□□□ -0.44
AC004540.1-204ENST00000449537 CPP00450 1065 aa12.32□□□□□ -0.44
AC004540.1-204ENST00000449537 FOSL1P15407 271 aa12.32□□□□□ -0.44
AC004540.1-204ENST00000449537 SMSP52788 366 aa12.32□□□□□ -0.44
AC004540.1-204ENST00000449537 PPP1CAP62136 330 aa12.32□□□□□ -0.44
AC004540.1-204ENST00000449537 NCF4Q15080 339 aa12.32□□□□□ -0.44
AC004540.1-204ENST00000449537 TLR1Q15399 786 aa12.32□□□□□ -0.44
AC004540.1-204ENST00000449537 GPR19Q15760 415 aa12.32□□□□□ -0.44
AC004540.1-204ENST00000449537 C15orf59Q2T9L4 293 aaPredicted RBP12.32□□□□□ -0.44
AC004540.1-204ENST00000449537 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.32□□□□□ -0.44
AC004540.1-204ENST00000449537 DPCR1Q3MIW9 517 aa12.32□□□□□ -0.44
AC004540.1-204ENST00000449537 PRAMEF17Q5VTA0 474 aa12.32□□□□□ -0.44
AC004540.1-204ENST00000449537 GJB7Q6PEY0 223 aa12.32□□□□□ -0.44
AC004540.1-204ENST00000449537 D2HGDHQ8N465 521 aa12.32□□□□□ -0.44
AC004540.1-204ENST00000449537 CCDC185Q8N715 623 aa12.32□□□□□ -0.44
AC004540.1-204ENST00000449537 EMC1Q8N766 993 aa12.32□□□□□ -0.44
AC004540.1-204ENST00000449537 SCRN2Q96FV2 425 aa12.32□□□□□ -0.44
AC004540.1-204ENST00000449537 CEP63Q96MT8 703 aa12.32□□□□□ -0.44
AC004540.1-204ENST00000449537 MAP3K3Q99759 626 aa12.32□□□□□ -0.44
AC004540.1-204ENST00000449537 PDCL3Q9H2J4 239 aa12.32□□□□□ -0.44
AC004540.1-204ENST00000449537 SLC40A1Q9NP59 571 aa12.32□□□□□ -0.44
AC004540.1-204ENST00000449537 KLC4Q9NSK0 619 aa12.32□□□□□ -0.44
AC004540.1-204ENST00000449537 RWDD2AQ9UIY3 292 aa12.32□□□□□ -0.44
AC004540.1-204ENST00000449537 CSPG4Q6UVK1 2322 aa12.32□□□□□ -0.44
AC004540.1-204ENST00000449537 MAP1AP78559 2803 aaPredicted RBP12.32□□□□□ -0.44
AC004540.1-204ENST00000449537 SPTBP11277 2137 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms