RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 PLXDC1Q8IUK5 500 aa27.86■■■□□ 2.05
CBX4-202ENST00000448310 ZNF547Q8IVP9 402 aa27.86■■■□□ 2.05
CBX4-202ENST00000448310 TRIM48Q8IWZ4 208 aa27.86■■■□□ 2.05
CBX4-202ENST00000448310 AVL9Q8NBF6 648 aa27.86■■■□□ 2.05
CBX4-202ENST00000448310 GPR89AB7ZAQ6 455 aa27.85■■■□□ 2.05
CBX4-202ENST00000448310 KMOO15229 486 aa27.85■■■□□ 2.05
CBX4-202ENST00000448310 MFAP3LO75121 409 aa27.85■■■□□ 2.05
CBX4-202ENST00000448310 GPR89BP0CG08 455 aa27.85■■■□□ 2.05
CBX4-202ENST00000448310 PRKAR1AP10644 381 aa27.85■■■□□ 2.05
CBX4-202ENST00000448310 XRCC1P18887 633 aaPredicted RBP27.85■■■□□ 2.05
CBX4-202ENST00000448310 MAP4P27816 1152 aaKnown RBP27.85■■■□□ 2.05
CBX4-202ENST00000448310 POLE2P56282 527 aa27.85■■■□□ 2.05
CBX4-202ENST00000448310 SLC14A2Q15849 920 aa27.85■■■□□ 2.05
CBX4-202ENST00000448310 CCDC70Q6NSX1 233 aa27.85■■■□□ 2.05
CBX4-202ENST00000448310 VSTM4Q8IW00 320 aa27.85■■■□□ 2.05
CBX4-202ENST00000448310 RHOT1Q8IXI2 618 aa27.85■■■□□ 2.05
CBX4-202ENST00000448310 KIAA1143Q96AT1 154 aaPredicted RBP27.85■■■□□ 2.05
CBX4-202ENST00000448310 SLC45A3Q96JT2 553 aa27.85■■■□□ 2.05
CBX4-202ENST00000448310 ZPBPQ9BS86 351 aa27.85■■■□□ 2.05
CBX4-202ENST00000448310 SIDT1Q9NXL6 827 aaKnown RBP27.85■■■□□ 2.05
CBX4-202ENST00000448310 IL17BQ9UHF5 180 aa27.85■■■□□ 2.05
CBX4-202ENST00000448310 TMEM184BQ9Y519 407 aaPredicted RBP27.85■■■□□ 2.05
CBX4-202ENST00000448310 POLR1CO15160 346 aaPredicted RBP27.84■■■□□ 2.05
CBX4-202ENST00000448310 CDK14O94921 469 aa27.84■■■□□ 2.05
CBX4-202ENST00000448310 PECAM1P16284 738 aaPredicted RBP27.84■■■□□ 2.05
CBX4-202ENST00000448310 RPL10P27635 214 aaKnown RBP27.84■■■□□ 2.05
CBX4-202ENST00000448310 CSRP3P50461 194 aa27.84■■■□□ 2.05
CBX4-202ENST00000448310 PRKD1Q15139 912 aaPredicted RBP27.84■■■□□ 2.05
CBX4-202ENST00000448310 C9orf72Q96LT7 481 aa27.84■■■□□ 2.05
CBX4-202ENST00000448310 TEKT5Q96M29 485 aa27.84■■■□□ 2.05
CBX4-202ENST00000448310 TGM7Q96PF1 710 aa27.84■■■□□ 2.05
CBX4-202ENST00000448310 TIMM29Q9BSF4 260 aa27.84■■■□□ 2.05
CBX4-202ENST00000448310 ADNPQ9H2P0 1102 aa27.84■■■□□ 2.05
CBX4-202ENST00000448310 UCK1Q9HA47 277 aa27.84■■■□□ 2.05
CBX4-202ENST00000448310 DDX56Q9NY93 547 aaKnown RBP27.84■■■□□ 2.05
CBX4-202ENST00000448310 TRIM10Q9UDY6 481 aa27.84■■■□□ 2.05
CBX4-202ENST00000448310 PRR19A6NJB7 356 aa27.83■■■□□ 2.05
CBX4-202ENST00000448310 F5H423 210 aaPredicted RBP27.83■■■□□ 2.05
CBX4-202ENST00000448310 VEGFDO43915 354 aa27.83■■■□□ 2.05
CBX4-202ENST00000448310 UBXN7O94888 489 aa27.83■■■□□ 2.05
CBX4-202ENST00000448310 C9P02748 559 aa27.83■■■□□ 2.05
CBX4-202ENST00000448310 TPM1P09493 284 aa27.83■■■□□ 2.05
CBX4-202ENST00000448310 BRAFP15056 766 aa27.83■■■□□ 2.05
CBX4-202ENST00000448310 COMTP21964 271 aa27.83■■■□□ 2.05
CBX4-202ENST00000448310 CD68P34810 354 aaPredicted RBP27.83■■■□□ 2.05
CBX4-202ENST00000448310 LEPRP48357 1165 aaKnown RBP27.83■■■□□ 2.05
CBX4-202ENST00000448310 DRG2P55039 364 aaKnown RBP27.83■■■□□ 2.05
CBX4-202ENST00000448310 FOXM1Q08050 763 aa27.83■■■□□ 2.05
CBX4-202ENST00000448310 KCNAB2Q13303 367 aa27.83■■■□□ 2.05
CBX4-202ENST00000448310 ATP13A5Q4VNC0 1218 aa27.83■■■□□ 2.05
CBX4-202ENST00000448310 KAZNQ674X7 775 aa27.83■■■□□ 2.05
CBX4-202ENST00000448310 PTRH1Q86Y79 214 aaKnown RBP27.83■■■□□ 2.05
CBX4-202ENST00000448310 OR52A4PA6NMU1 304 aa27.82■■■□□ 2.04
CBX4-202ENST00000448310 CAPN5O15484 640 aaPredicted RBP27.82■■■□□ 2.04
CBX4-202ENST00000448310 SPOPO43791 374 aa27.82■■■□□ 2.04
CBX4-202ENST00000448310 DLGAP3O95886 979 aa27.82■■■□□ 2.04
CBX4-202ENST00000448310 ANKRD34CP0C6C1 535 aa27.82■■■□□ 2.04
CBX4-202ENST00000448310 AMD1P17707 334 aa27.82■■■□□ 2.04
CBX4-202ENST00000448310 NFKB1P19838 968 aa27.82■■■□□ 2.04
CBX4-202ENST00000448310 CDKN2BP42772 138 aa27.82■■■□□ 2.04
CBX4-202ENST00000448310 SLC1A1P43005 524 aa27.82■■■□□ 2.04
CBX4-202ENST00000448310 CCR10P46092 362 aa27.82■■■□□ 2.04
CBX4-202ENST00000448310 SEPHS1P49903 392 aa27.82■■■□□ 2.04
CBX4-202ENST00000448310 WASHC5Q12768 1159 aa27.82■■■□□ 2.04
CBX4-202ENST00000448310 GDAP1Q8TB36 358 aa27.82■■■□□ 2.04
CBX4-202ENST00000448310 HECTD1Q9ULT8 2610 aa27.82■■■□□ 2.04
CBX4-202ENST00000448310 CST8O60676 142 aa27.81■■■□□ 2.04
CBX4-202ENST00000448310 CHRNA4P43681 627 aa27.81■■■□□ 2.04
CBX4-202ENST00000448310 WNT3AP56704 352 aa27.81■■■□□ 2.04
CBX4-202ENST00000448310 SH3BP2P78314 561 aa27.81■■■□□ 2.04
CBX4-202ENST00000448310 ADCY2Q08462 1091 aa27.81■■■□□ 2.04
CBX4-202ENST00000448310 ABHD18Q0P651 414 aa27.81■■■□□ 2.04
CBX4-202ENST00000448310 CDC20Q12834 499 aa27.81■■■□□ 2.04
CBX4-202ENST00000448310 KDELC1Q6UW63 502 aa27.81■■■□□ 2.04
CBX4-202ENST00000448310 C11orf96Q7Z7L8 435 aa27.81■■■□□ 2.04
CBX4-202ENST00000448310 TRAPPC5Q8IUR0 188 aa27.81■■■□□ 2.04
CBX4-202ENST00000448310 SLC25A41Q8N5S1 370 aa27.81■■■□□ 2.04
CBX4-202ENST00000448310 TFB1MQ8WVM0 346 aaKnown RBP27.81■■■□□ 2.04
CBX4-202ENST00000448310 RSC1A1Q92681 617 aa27.81■■■□□ 2.04
CBX4-202ENST00000448310 CATSPER2Q96P56 530 aa27.81■■■□□ 2.04
CBX4-202ENST00000448310 VPS35Q96QK1 796 aa27.81■■■□□ 2.04
CBX4-202ENST00000448310 GOLPH3Q9H4A6 298 aa27.81■■■□□ 2.04
CBX4-202ENST00000448310 FAM153AQ9UHL3 310 aa27.81■■■□□ 2.04
CBX4-202ENST00000448310 ZNF28P17035 718 aa27.8■■■□□ 2.04
CBX4-202ENST00000448310 IDSP22304 550 aa27.8■■■□□ 2.04
CBX4-202ENST00000448310 OAS2P29728 719 aaKnown RBP27.8■■■□□ 2.04
CBX4-202ENST00000448310 TMEM115Q12893 351 aaPredicted RBP27.8■■■□□ 2.04
CBX4-202ENST00000448310 TAZQ16635 292 aa27.8■■■□□ 2.04
CBX4-202ENST00000448310 ABRAXAS1Q6UWZ7 409 aa27.8■■■□□ 2.04
CBX4-202ENST00000448310 TTC30BQ8N4P2 665 aa27.8■■■□□ 2.04
CBX4-202ENST00000448310 SRPK1Q96SB4 655 aaKnown RBP27.8■■■□□ 2.04
CBX4-202ENST00000448310 POT1Q9NUX5 634 aa27.8■■■□□ 2.04
CBX4-202ENST00000448310 UBR5O95071 2799 aaPredicted RBP27.8■■■□□ 2.04
CBX4-202ENST00000448310 LOC285095A0A1B0GVY8 99 aa27.79■■■□□ 2.04
CBX4-202ENST00000448310 GPR39O43194 453 aa27.79■■■□□ 2.04
CBX4-202ENST00000448310 KIF1CO43896 1103 aaKnown RBP27.79■■■□□ 2.04
CBX4-202ENST00000448310 RASSF9O75901 435 aa27.79■■■□□ 2.04
CBX4-202ENST00000448310 NR2C2P49116 596 aa27.79■■■□□ 2.04
CBX4-202ENST00000448310 GTF2H3Q13889 308 aa27.79■■■□□ 2.04
CBX4-202ENST00000448310 TFDP2Q14188 446 aa27.79■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms