RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 PTGR1Q14914 329 aa8.88□□□□□ -0.99
NIPBL-202ENST00000448238 PAPD4Q6PIY7 484 aaKnown RBP8.88□□□□□ -0.99
NIPBL-202ENST00000448238 NAPRTQ6XQN6 538 aa8.88□□□□□ -0.99
NIPBL-202ENST00000448238 MFSD2AQ8NA29 543 aa8.88□□□□□ -0.99
NIPBL-202ENST00000448238 HTATIP2Q9BUP3 242 aa8.88□□□□□ -0.99
NIPBL-202ENST00000448238 ANKHQ9HCJ1 492 aa8.88□□□□□ -0.99
NIPBL-202ENST00000448238 RAB19A4D1S5 217 aa8.88□□□□□ -0.99
NIPBL-202ENST00000448238 CYB5BO43169 146 aa8.88□□□□□ -0.99
NIPBL-202ENST00000448238 ATG13O75143 517 aa8.88□□□□□ -0.99
NIPBL-202ENST00000448238 PRKACAP17612 351 aa8.88□□□□□ -0.99
NIPBL-202ENST00000448238 MAGP20916 626 aa8.88□□□□□ -0.99
NIPBL-202ENST00000448238 OR1E1P30953 314 aa8.88□□□□□ -0.99
NIPBL-202ENST00000448238 EIPR1Q53HC9 387 aa8.88□□□□□ -0.99
NIPBL-202ENST00000448238 TMEM41BQ5BJD5 291 aa8.88□□□□□ -0.99
NIPBL-202ENST00000448238 ARMC12Q5T9G4 340 aa8.88□□□□□ -0.99
NIPBL-202ENST00000448238 ZNF280DQ6N043 979 aa8.88□□□□□ -0.99
NIPBL-202ENST00000448238 VTCN1Q7Z7D3 282 aa8.88□□□□□ -0.99
NIPBL-202ENST00000448238 FOXRED2Q8IWF2 684 aa8.88□□□□□ -0.99
NIPBL-202ENST00000448238 PQLC1Q8N2U9 271 aa8.88□□□□□ -0.99
NIPBL-202ENST00000448238 EAF2Q96CJ1 260 aaPredicted RBP8.88□□□□□ -0.99
NIPBL-202ENST00000448238 TRMOQ9BU70 441 aa8.88□□□□□ -0.99
NIPBL-202ENST00000448238 ADAM28Q9UKQ2 775 aa8.88□□□□□ -0.99
NIPBL-202ENST00000448238 MT-CO1P00395 513 aa8.88□□□□□ -0.99
NIPBL-202ENST00000448238 IFNGR1P15260 489 aa8.88□□□□□ -0.99
NIPBL-202ENST00000448238 RPL10P27635 214 aaKnown RBP8.88□□□□□ -0.99
NIPBL-202ENST00000448238 XKR4Q5GH76 650 aa8.88□□□□□ -0.99
NIPBL-202ENST00000448238 TOR1AIP1Q5JTV8 583 aa8.88□□□□□ -0.99
NIPBL-202ENST00000448238 KCTD8Q6ZWB6 473 aa8.88□□□□□ -0.99
NIPBL-202ENST00000448238 GET4Q7L5D6 327 aaPredicted RBP8.88□□□□□ -0.99
NIPBL-202ENST00000448238 RD3Q7Z3Z2 195 aa8.88□□□□□ -0.99
NIPBL-202ENST00000448238 OR4A15Q8NGL6 344 aa8.88□□□□□ -0.99
NIPBL-202ENST00000448238 CLDN4O14493 209 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 NDUFS2O75306 463 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 AKAP3O75969 853 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 B3GAT3O94766 335 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 GKN3PP0CG01 181 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 CYP4B1P13584 511 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 HSD11B1P28845 292 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 SERPINF1P36955 418 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 TEAD4Q15561 434 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 GPR135Q8IZ08 494 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 ADAMTS15Q8TE58 950 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 CHPT1Q8WUD6 406 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 PPCDCQ96CD2 204 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 ZNF419Q96HQ0 510 aaPredicted RBP8.87□□□□□ -0.99
NIPBL-202ENST00000448238 RIPOR3Q96MK2 946 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 OMDQ99983 421 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 RHBGQ9H310 441 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 SMPD3Q9NY59 655 aaPredicted RBP8.87□□□□□ -0.99
NIPBL-202ENST00000448238 HSPB11Q9Y547 144 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 FAM234BA2RU67 622 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 FAM205CA6NFA0 338 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 OXSR1O95747 527 aaPredicted RBP8.87□□□□□ -0.99
NIPBL-202ENST00000448238 GH2P01242 217 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 CAP2P40123 477 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 SLC15A1P46059 708 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 HTD2P86397 168 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 CD83Q01151 205 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 CUL2Q13617 745 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 GINS1Q14691 196 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 CRTC2Q53ET0 693 aaPredicted RBP8.87□□□□□ -0.99
NIPBL-202ENST00000448238 GPR65Q8IYL9 337 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 ZNF527Q8NB42 609 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 OR10H4Q8NGA5 316 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 SEMA4DQ92854 862 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 COPS5Q92905 334 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 DMRTB1Q96MA1 342 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 ACTR6Q9GZN1 396 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 RAB9BQ9NP90 201 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 TLR6Q9Y2C9 796 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 PRKAB1Q9Y478 270 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 ZNF335Q9H4Z2 1342 aaPredicted RBP8.87□□□□□ -0.99
NIPBL-202ENST00000448238 WFS1O76024 890 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 IFI35P80217 286 aaPredicted RBP8.87□□□□□ -0.99
NIPBL-202ENST00000448238 RPA4Q13156 261 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 CPTPQ5TA50 214 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 GPRIN3Q6ZVF9 776 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 ZNF367Q7RTV3 350 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 FRZBQ92765 325 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 TBCBQ99426 244 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 VRK1Q99986 396 aaPredicted RBP8.87□□□□□ -0.99
NIPBL-202ENST00000448238 TAS2R10Q9NYW0 307 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 GAKO14976 1311 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 ANKARQ7Z5J8 1434 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 RPRD2Q5VT52 1461 aaKnown RBP8.87□□□□□ -0.99
NIPBL-202ENST00000448238 A0A087WWV3 80 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 SULT1C2O00338 296 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 AP2A1O95782 977 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 A1BGP04217 495 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 BCKDHAP12694 445 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 COX4I1P13073 169 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 NDUFA9Q16795 377 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 ELMOD2Q8IZ81 293 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 ZNF101Q8IZC7 436 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 MITD1Q8WV92 249 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 CASKIN2Q8WXE0 1202 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 RCN3Q96D15 328 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 ALPK1Q96QP1 1244 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 ZNF347Q96SE7 839 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 ERVK-18Q9QC07 812 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms