RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 TTLL4Q14679 1199 aa19.03■□□□□ 0.64
HMGA1-205ENST00000447654 CTU2Q2VPK5 515 aaKnown RBP19.03■□□□□ 0.64
HMGA1-205ENST00000447654 SCARA5Q6ZMJ2 495 aa19.03■□□□□ 0.64
HMGA1-205ENST00000447654 GALNT7Q86SF2 657 aa19.03■□□□□ 0.64
HMGA1-205ENST00000447654 FUNDC1Q8IVP5 155 aa19.03■□□□□ 0.64
HMGA1-205ENST00000447654 PARP16Q8N5Y8 322 aa19.03■□□□□ 0.64
HMGA1-205ENST00000447654 AMER2Q8N7J2 671 aa19.03■□□□□ 0.64
HMGA1-205ENST00000447654 ZFAND1Q8TCF1 268 aa19.03■□□□□ 0.64
HMGA1-205ENST00000447654 METTL2AQ96IZ6 378 aaKnown RBP19.03■□□□□ 0.64
HMGA1-205ENST00000447654 MRPL9Q9BYD2 267 aaKnown RBP19.03■□□□□ 0.64
HMGA1-205ENST00000447654 PLEKHA5Q9HAU0 1116 aa19.03■□□□□ 0.64
HMGA1-205ENST00000447654 NTN4Q9HB63 628 aa19.03■□□□□ 0.64
HMGA1-205ENST00000447654 TAS2R9Q9NYW1 312 aa19.03■□□□□ 0.64
HMGA1-205ENST00000447654 HES2Q9Y543 173 aa19.03■□□□□ 0.64
HMGA1-205ENST00000447654 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.02■□□□□ 0.64
HMGA1-205ENST00000447654 FXYD1O00168 92 aa19.02■□□□□ 0.64
HMGA1-205ENST00000447654 UPK1AO00322 258 aa19.02■□□□□ 0.64
HMGA1-205ENST00000447654 CTDSP2O14595 271 aa19.02■□□□□ 0.64
HMGA1-205ENST00000447654 ANGPT2O15123 496 aa19.02■□□□□ 0.64
HMGA1-205ENST00000447654 ZNF286BP0CG31 522 aa19.02■□□□□ 0.64
HMGA1-205ENST00000447654 CXCL8P10145 99 aa19.02■□□□□ 0.64
HMGA1-205ENST00000447654 JUNDP17535 347 aa19.02■□□□□ 0.64
HMGA1-205ENST00000447654 GPX3P22352 226 aa19.02■□□□□ 0.64
HMGA1-205ENST00000447654 GGT5P36269 586 aa19.02■□□□□ 0.64
HMGA1-205ENST00000447654 CXCR4P61073 352 aa19.02■□□□□ 0.64
HMGA1-205ENST00000447654 ISL1P61371 349 aa19.02■□□□□ 0.64
HMGA1-205ENST00000447654 NCS1P62166 190 aa19.02■□□□□ 0.64
HMGA1-205ENST00000447654 CRADDP78560 199 aa19.02■□□□□ 0.64
HMGA1-205ENST00000447654 ZNF792Q3KQV3 632 aa19.02■□□□□ 0.64
HMGA1-205ENST00000447654 TPRG1LQ5T0D9 272 aa19.02■□□□□ 0.64
HMGA1-205ENST00000447654 OTUD3Q5T2D3 398 aaPredicted RBP19.02■□□□□ 0.64
HMGA1-205ENST00000447654 MPZL3Q6UWV2 235 aa19.02■□□□□ 0.64
HMGA1-205ENST00000447654 HDDC2Q7Z4H3 204 aa19.02■□□□□ 0.64
HMGA1-205ENST00000447654 TMEM135Q86UB9 458 aa19.02■□□□□ 0.64
HMGA1-205ENST00000447654 RAB43Q86YS6 212 aa19.02■□□□□ 0.64
HMGA1-205ENST00000447654 TMEM199Q8N511 208 aa19.02■□□□□ 0.64
HMGA1-205ENST00000447654 CCDC126Q96EE4 140 aa19.02■□□□□ 0.64
HMGA1-205ENST00000447654 VPS39Q96JC1 886 aa19.02■□□□□ 0.64
HMGA1-205ENST00000447654 MS4A4AQ96JQ5 239 aa19.02■□□□□ 0.64
HMGA1-205ENST00000447654 C17orf62Q9BQA9 187 aa19.02■□□□□ 0.64
HMGA1-205ENST00000447654 GTSE1Q9NYZ3 720 aa19.02■□□□□ 0.64
HMGA1-205ENST00000447654 CCDC59Q9P031 241 aaKnown RBP19.02■□□□□ 0.64
HMGA1-205ENST00000447654 SEPT10Q9P0V9 454 aa19.02■□□□□ 0.64
HMGA1-205ENST00000447654 ATPIF1Q9UII2 106 aa19.02■□□□□ 0.64
HMGA1-205ENST00000447654 BTBD3Q9Y2F9 522 aa19.02■□□□□ 0.64
HMGA1-205ENST00000447654 TPRKBQ9Y3C4 175 aa19.02■□□□□ 0.64
HMGA1-205ENST00000447654 PEX16Q9Y5Y5 336 aa19.02■□□□□ 0.64
HMGA1-205ENST00000447654 A0A0X1KG70 313 aa19.02■□□□□ 0.63
HMGA1-205ENST00000447654 TMEM233B4DJY2 109 aa19.02■□□□□ 0.63
HMGA1-205ENST00000447654 H3BMM5 538 aa19.02■□□□□ 0.63
HMGA1-205ENST00000447654 MDM4O15151 490 aa19.02■□□□□ 0.63
HMGA1-205ENST00000447654 AXIN1O15169 862 aa19.02■□□□□ 0.63
HMGA1-205ENST00000447654 ZNF780AO75290 641 aaPredicted RBP19.02■□□□□ 0.63
HMGA1-205ENST00000447654 LGALS2P05162 132 aa19.02■□□□□ 0.63
HMGA1-205ENST00000447654 ARNTP27540 789 aa19.02■□□□□ 0.63
HMGA1-205ENST00000447654 ASPAP45381 313 aa19.02■□□□□ 0.63
HMGA1-205ENST00000447654 MLLT6P55198 1093 aaPredicted RBP19.02■□□□□ 0.63
HMGA1-205ENST00000447654 GRM1Q13255 1194 aa19.02■□□□□ 0.63
HMGA1-205ENST00000447654 CLCA4Q14CN2 919 aa19.02■□□□□ 0.63
HMGA1-205ENST00000447654 DUOXA2Q1HG44 320 aa19.02■□□□□ 0.63
HMGA1-205ENST00000447654 PARP15Q460N3 678 aa19.02■□□□□ 0.63
HMGA1-205ENST00000447654 LAIR2Q6ISS4 152 aa19.02■□□□□ 0.63
HMGA1-205ENST00000447654 TCAIMQ8N3R3 496 aa19.02■□□□□ 0.63
HMGA1-205ENST00000447654 FSTL5Q8N475 847 aaPredicted RBP19.02■□□□□ 0.63
HMGA1-205ENST00000447654 PHOX2BQ99453 314 aa19.02■□□□□ 0.63
HMGA1-205ENST00000447654 ADPGKQ9BRR6 497 aa19.02■□□□□ 0.63
HMGA1-205ENST00000447654 C1QTNF7Q9BXJ2 289 aa19.02■□□□□ 0.63
HMGA1-205ENST00000447654 CDT1Q9H211 546 aa19.02■□□□□ 0.63
HMGA1-205ENST00000447654 DCSTAMPQ9H295 470 aa19.02■□□□□ 0.63
HMGA1-205ENST00000447654 CCNB1IP1Q9NPC3 277 aa19.02■□□□□ 0.63
HMGA1-205ENST00000447654 PLSCR3Q9NRY6 295 aa19.02■□□□□ 0.63
HMGA1-205ENST00000447654 B3GNT2Q9NY97 397 aa19.02■□□□□ 0.63
HMGA1-205ENST00000447654 RUVBL2Q9Y230 463 aaKnown RBP19.02■□□□□ 0.63
HMGA1-205ENST00000447654 PCDHGB6Q9Y5F9 930 aa19.02■□□□□ 0.63
HMGA1-205ENST00000447654 HBP1O60381 514 aa19.01■□□□□ 0.63
HMGA1-205ENST00000447654 ALOX12P18054 663 aa19.01■□□□□ 0.63
HMGA1-205ENST00000447654 ADCYAP1R1P41586 468 aa19.01■□□□□ 0.63
HMGA1-205ENST00000447654 GNPDA1P46926 289 aa19.01■□□□□ 0.63
HMGA1-205ENST00000447654 CCNA1P78396 465 aa19.01■□□□□ 0.63
HMGA1-205ENST00000447654 TBRG1Q3YBR2 411 aa19.01■□□□□ 0.63
HMGA1-205ENST00000447654 RBM20Q5T481 1227 aaKnown RBP19.01■□□□□ 0.63
HMGA1-205ENST00000447654 ZNF691Q5VV52 312 aa19.01■□□□□ 0.63
HMGA1-205ENST00000447654 MAP1SQ66K74 1059 aaPredicted RBP19.01■□□□□ 0.63
HMGA1-205ENST00000447654 ZNF517Q6ZMY9 492 aaPredicted RBP19.01■□□□□ 0.63
HMGA1-205ENST00000447654 ZC3HC1Q86WB0 502 aaKnown RBP19.01■□□□□ 0.63
HMGA1-205ENST00000447654 SVOPLQ8N434 492 aa19.01■□□□□ 0.63
HMGA1-205ENST00000447654 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.01■□□□□ 0.63
HMGA1-205ENST00000447654 CCNYL1Q8N7R7 359 aa19.01■□□□□ 0.63
HMGA1-205ENST00000447654 LRRC58Q96CX6 371 aa19.01■□□□□ 0.63
HMGA1-205ENST00000447654 MRPL57Q9BQC6 102 aaKnown RBP19.01■□□□□ 0.63
HMGA1-205ENST00000447654 CCDC90BQ9GZT6 254 aa19.01■□□□□ 0.63
HMGA1-205ENST00000447654 KATNBL1Q9H079 304 aa19.01■□□□□ 0.63
HMGA1-205ENST00000447654 NUAK2Q9H093 628 aa19.01■□□□□ 0.63
HMGA1-205ENST00000447654 DUSP21Q9H596 190 aa19.01■□□□□ 0.63
HMGA1-205ENST00000447654 CAB39LQ9H9S4 337 aa19.01■□□□□ 0.63
HMGA1-205ENST00000447654 ZNF556Q9HAH1 456 aa19.01■□□□□ 0.63
HMGA1-205ENST00000447654 IARS2Q9NSE4 1012 aaKnown RBP19.01■□□□□ 0.63
HMGA1-205ENST00000447654 BOLA1Q9Y3E2 137 aa19.01■□□□□ 0.63
HMGA1-205ENST00000447654 PLXNA1Q9UIW2 1896 aa19.01■□□□□ 0.63
HMGA1-205ENST00000447654 EFCAB9A8MZ26 197 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms