RNA–Protein interactions for RNA: ENST00000447510.6

PROM1-201, Transcript of prominin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PROM1, Length 3,977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-201ENST00000447510 FAM124AQ86V42 546 aa5.91□□□□□ -1.46
PROM1-201ENST00000447510 FAM47BQ8NA70 645 aa5.91□□□□□ -1.46
PROM1-201ENST00000447510 BHLHE22Q8NFJ8 381 aaPredicted RBP5.91□□□□□ -1.46
PROM1-201ENST00000447510 WFDC5Q8TCV5 224 aa5.91□□□□□ -1.46
PROM1-201ENST00000447510 HDAC11Q96DB2 347 aa5.91□□□□□ -1.46
PROM1-201ENST00000447510 PPP1R16AQ96I34 528 aa5.91□□□□□ -1.46
PROM1-201ENST00000447510 QKIQ96PU8 341 aaKnown RBP eCLIP5.91□□□□□ -1.46
PROM1-201ENST00000447510 GPR63Q9BZJ6 419 aa5.91□□□□□ -1.46
PROM1-201ENST00000447510 PRM3Q9NNZ6 103 aa5.91□□□□□ -1.46
PROM1-201ENST00000447510 POLMQ9NP87 494 aaPredicted RBP5.91□□□□□ -1.46
PROM1-201ENST00000447510 TXNDC16Q9P2K2 825 aa5.91□□□□□ -1.46
PROM1-201ENST00000447510 SLC24A2Q9UI40 661 aa5.91□□□□□ -1.46
PROM1-201ENST00000447510 RABGEF1Q9UJ41 708 aa5.91□□□□□ -1.46
PROM1-201ENST00000447510 POU2F3Q9UKI9 436 aa5.91□□□□□ -1.46
PROM1-201ENST00000447510 DRG1Q9Y295 367 aaKnown RBP5.91□□□□□ -1.46
PROM1-201ENST00000447510 TBC1D30Q9Y2I9 924 aa5.91□□□□□ -1.46
PROM1-201ENST00000447510 PCDHGA3Q9Y5H0 932 aa5.91□□□□□ -1.46
PROM1-201ENST00000447510 SDK1Q7Z5N4 2213 aa5.9□□□□□ -1.46
PROM1-201ENST00000447510 CCDC78A2IDD5 438 aa5.9□□□□□ -1.46
PROM1-201ENST00000447510 A8MX80 341 aa5.9□□□□□ -1.46
PROM1-201ENST00000447510 TAF4O00268 1085 aa5.9□□□□□ -1.46
PROM1-201ENST00000447510 TP73O15350 636 aa5.9□□□□□ -1.46
PROM1-201ENST00000447510 POP4O95707 220 aaKnown RBP5.9□□□□□ -1.46
PROM1-201ENST00000447510 TOP3BO95985 862 aaKnown RBP5.9□□□□□ -1.46
PROM1-201ENST00000447510 MAGP20916 626 aa5.9□□□□□ -1.46
PROM1-201ENST00000447510 PTPN7P35236 360 aa5.9□□□□□ -1.46
PROM1-201ENST00000447510 CTSOP43234 321 aaPredicted RBP5.9□□□□□ -1.46
PROM1-201ENST00000447510 CDK9P50750 372 aaKnown RBP5.9□□□□□ -1.46
PROM1-201ENST00000447510 DSC2Q02487 901 aa5.9□□□□□ -1.46
PROM1-201ENST00000447510 SLC10A2Q12908 348 aaPredicted RBP5.9□□□□□ -1.46
PROM1-201ENST00000447510 ART3Q13508 389 aa5.9□□□□□ -1.46
PROM1-201ENST00000447510 PRKD1Q15139 912 aaPredicted RBP5.9□□□□□ -1.46
PROM1-201ENST00000447510 CARD16Q5EG05 197 aa5.9□□□□□ -1.46
PROM1-201ENST00000447510 UBALD2Q8IYN6 164 aa5.9□□□□□ -1.46
PROM1-201ENST00000447510 TSTD1Q8NFU3 115 aa5.9□□□□□ -1.46
PROM1-201ENST00000447510 CALML6Q8TD86 181 aa5.9□□□□□ -1.46
PROM1-201ENST00000447510 BLOC1S5Q8TDH9 187 aa5.9□□□□□ -1.46
PROM1-201ENST00000447510 ACTRT2Q8TDY3 377 aa5.9□□□□□ -1.46
PROM1-201ENST00000447510 HMGB4Q8WW32 186 aa5.9□□□□□ -1.46
PROM1-201ENST00000447510 ALKBH8Q96BT7 664 aaKnown RBP5.9□□□□□ -1.46
PROM1-201ENST00000447510 ZNF599Q96NL3 588 aa5.9□□□□□ -1.46
PROM1-201ENST00000447510 ADGRE3Q9BY15 652 aa5.9□□□□□ -1.46
PROM1-201ENST00000447510 GLOD4Q9HC38 313 aa5.9□□□□□ -1.46
PROM1-201ENST00000447510 C20orf96Q9NUD7 363 aaPredicted RBP5.9□□□□□ -1.46
PROM1-201ENST00000447510 DDX28Q9NUL7 540 aaKnown RBP5.9□□□□□ -1.46
PROM1-201ENST00000447510 PSMD13Q9UNM6 376 aa5.9□□□□□ -1.46
PROM1-201ENST00000447510 IGLV3-10A0A075B6K4 115 aa5.9□□□□□ -1.47
PROM1-201ENST00000447510 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.9□□□□□ -1.47
PROM1-201ENST00000447510 BCLAF3A2AJT9 711 aaKnown RBP5.9□□□□□ -1.47
PROM1-201ENST00000447510 WASH4PA8MWX3 477 aa5.9□□□□□ -1.47
PROM1-201ENST00000447510 TTC34A8MYJ7 566 aa5.9□□□□□ -1.47
PROM1-201ENST00000447510 K7ERQ8 282 aa5.9□□□□□ -1.47
PROM1-201ENST00000447510 LZTS3O60299 673 aaPredicted RBP5.9□□□□□ -1.47
PROM1-201ENST00000447510 USP12O75317 370 aa5.9□□□□□ -1.47
PROM1-201ENST00000447510 KCNH1O95259 989 aa5.9□□□□□ -1.47
PROM1-201ENST00000447510 MT-CO1P00395 513 aa5.9□□□□□ -1.47
PROM1-201ENST00000447510 ITGAVP06756 1048 aa5.9□□□□□ -1.47
PROM1-201ENST00000447510 TCF3P15923 654 aa5.9□□□□□ -1.47
PROM1-201ENST00000447510 PTPN3P26045 913 aa5.9□□□□□ -1.47
PROM1-201ENST00000447510 GSSP48637 474 aa5.9□□□□□ -1.47
PROM1-201ENST00000447510 POLR2LP62875 67 aaKnown RBP5.9□□□□□ -1.47
PROM1-201ENST00000447510 ZP2Q05996 745 aa5.9□□□□□ -1.47
PROM1-201ENST00000447510 SEMA3BQ13214 749 aa5.9□□□□□ -1.47
PROM1-201ENST00000447510 KCNJ8Q15842 424 aa5.9□□□□□ -1.47
PROM1-201ENST00000447510 FUT11Q495W5 492 aa5.9□□□□□ -1.47
PROM1-201ENST00000447510 FAAH2Q6GMR7 532 aa5.9□□□□□ -1.47
PROM1-201ENST00000447510 C22orf39Q6P5X5 142 aa5.9□□□□□ -1.47
PROM1-201ENST00000447510 PRR23CQ6ZRP0 262 aa5.9□□□□□ -1.47
PROM1-201ENST00000447510 CYP4V2Q6ZWL3 525 aaPredicted RBP5.9□□□□□ -1.47
PROM1-201ENST00000447510 MMAAQ8IVH4 418 aaKnown RBP5.9□□□□□ -1.47
PROM1-201ENST00000447510 IQCF2Q8IXL9 164 aa5.9□□□□□ -1.47
PROM1-201ENST00000447510 MARVELD2Q8N4S9 558 aa5.9□□□□□ -1.47
PROM1-201ENST00000447510 ALLCQ8N6M5 410 aa5.9□□□□□ -1.47
PROM1-201ENST00000447510 PCDH20Q8N6Y1 951 aaKnown RBP5.9□□□□□ -1.47
PROM1-201ENST00000447510 CYGBQ8WWM9 190 aa5.9□□□□□ -1.47
PROM1-201ENST00000447510 APOPT1Q96IL0 206 aa5.9□□□□□ -1.47
PROM1-201ENST00000447510 SERPINI1Q99574 410 aa5.9□□□□□ -1.47
PROM1-201ENST00000447510 COQ7Q99807 217 aa5.9□□□□□ -1.47
PROM1-201ENST00000447510 GBA3Q9H227 469 aa5.9□□□□□ -1.47
PROM1-201ENST00000447510 PCDH9Q9HC56 1237 aa5.9□□□□□ -1.47
PROM1-201ENST00000447510 ACSS2Q9NR19 701 aa5.9□□□□□ -1.47
PROM1-201ENST00000447510 GIMAP4Q9NUV9 329 aa5.9□□□□□ -1.47
PROM1-201ENST00000447510 HACD3Q9P035 362 aa5.9□□□□□ -1.47
PROM1-201ENST00000447510 MARK1Q9P0L2 795 aa5.9□□□□□ -1.47
PROM1-201ENST00000447510 PCDHB9Q9Y5E1 797 aa5.9□□□□□ -1.47
PROM1-201ENST00000447510 ACTL7AQ9Y615 435 aa5.9□□□□□ -1.47
PROM1-201ENST00000447510 DGKBQ9Y6T7 804 aa5.9□□□□□ -1.47
PROM1-201ENST00000447510 KIAA1671Q9BY89 1806 aa5.9□□□□□ -1.47
PROM1-201ENST00000447510 EDDM13A0A1B0GTR0 161 aa5.9□□□□□ -1.47
PROM1-201ENST00000447510 TTC24A2A3L6 582 aaPredicted RBP5.9□□□□□ -1.47
PROM1-201ENST00000447510 SAC3D1A6NKF1 404 aa5.9□□□□□ -1.47
PROM1-201ENST00000447510 PFDN6O15212 129 aa5.9□□□□□ -1.47
PROM1-201ENST00000447510 RNASEH2AO75792 299 aaKnown RBP5.9□□□□□ -1.47
PROM1-201ENST00000447510 PRNPP04156 253 aa5.9□□□□□ -1.47
PROM1-201ENST00000447510 ZNF182P17025 639 aaPredicted RBP5.9□□□□□ -1.47
PROM1-201ENST00000447510 FCARP24071 287 aa5.9□□□□□ -1.47
PROM1-201ENST00000447510 NTSR1P30989 418 aa5.9□□□□□ -1.47
PROM1-201ENST00000447510 RPL22P35268 128 aaKnown RBP5.9□□□□□ -1.47
PROM1-201ENST00000447510 PPM1FP49593 454 aaPredicted RBP5.9□□□□□ -1.47
PROM1-201ENST00000447510 SERPINH1P50454 418 aaKnown RBP5.9□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms