RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 MAPK15Q8TD08 544 aa11.76□□□□□ -0.53
RFC4-208ENST00000447345 CCDC74AQ96AQ1 378 aa11.76□□□□□ -0.53
RFC4-208ENST00000447345 CDKN2AIPNLQ96HQ2 116 aa11.76□□□□□ -0.53
RFC4-208ENST00000447345 RANBP9Q96S59 729 aa11.76□□□□□ -0.53
RFC4-208ENST00000447345 TRIM51Q9BSJ1 452 aa11.76□□□□□ -0.53
RFC4-208ENST00000447345 PCDHGA1Q9Y5H4 931 aa11.76□□□□□ -0.53
RFC4-208ENST00000447345 CHD8Q9HCK8 2581 aa11.75□□□□□ -0.53
RFC4-208ENST00000447345 EME2A4GXA9 379 aaPredicted RBP11.75□□□□□ -0.53
RFC4-208ENST00000447345 GPR89AB7ZAQ6 455 aa11.75□□□□□ -0.53
RFC4-208ENST00000447345 CHUKO15111 745 aa11.75□□□□□ -0.53
RFC4-208ENST00000447345 KMOO15229 486 aa11.75□□□□□ -0.53
RFC4-208ENST00000447345 TTI1O43156 1089 aa11.75□□□□□ -0.53
RFC4-208ENST00000447345 AVILO75366 819 aa11.75□□□□□ -0.53
RFC4-208ENST00000447345 GPR89BP0CG08 455 aa11.75□□□□□ -0.53
RFC4-208ENST00000447345 PTGIRP43119 386 aa11.75□□□□□ -0.53
RFC4-208ENST00000447345 MRPS25P82663 173 aaKnown RBP11.75□□□□□ -0.53
RFC4-208ENST00000447345 PTK6Q13882 451 aa11.75□□□□□ -0.53
RFC4-208ENST00000447345 FNBP1LQ5T0N5 605 aa11.75□□□□□ -0.53
RFC4-208ENST00000447345 CASC4Q6P4E1 433 aa11.75□□□□□ -0.53
RFC4-208ENST00000447345 LRRC8BQ6P9F7 803 aa11.75□□□□□ -0.53
RFC4-208ENST00000447345 CES3Q6UWW8 571 aa11.75□□□□□ -0.53
RFC4-208ENST00000447345 SERPINA9Q86WD7 417 aa11.75□□□□□ -0.53
RFC4-208ENST00000447345 ZNF547Q8IVP9 402 aa11.75□□□□□ -0.53
RFC4-208ENST00000447345 NAGSQ8N159 534 aa11.75□□□□□ -0.53
RFC4-208ENST00000447345 MPP5Q8N3R9 675 aa11.75□□□□□ -0.53
RFC4-208ENST00000447345 GPR156Q8NFN8 814 aa11.75□□□□□ -0.53
RFC4-208ENST00000447345 DTX3LQ8TDB6 740 aa11.75□□□□□ -0.53
RFC4-208ENST00000447345 ZNF592Q92610 1267 aa11.75□□□□□ -0.53
RFC4-208ENST00000447345 NAT6Q93015 286 aa11.75□□□□□ -0.53
RFC4-208ENST00000447345 HDAC10Q969S8 669 aa11.75□□□□□ -0.53
RFC4-208ENST00000447345 ULK4Q96C45 1275 aa11.75□□□□□ -0.53
RFC4-208ENST00000447345 SGF29Q96ES7 293 aa11.75□□□□□ -0.53
RFC4-208ENST00000447345 DCUN1D1Q96GG9 259 aa11.75□□□□□ -0.53
RFC4-208ENST00000447345 KRT12Q99456 494 aa11.75□□□□□ -0.53
RFC4-208ENST00000447345 COPS8Q99627 209 aa11.75□□□□□ -0.53
RFC4-208ENST00000447345 CCDC3Q9BQI4 270 aa11.75□□□□□ -0.53
RFC4-208ENST00000447345 IL22Q9GZX6 179 aa11.75□□□□□ -0.53
RFC4-208ENST00000447345 CHRAC1Q9NRG0 131 aa11.75□□□□□ -0.53
RFC4-208ENST00000447345 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.75□□□□□ -0.53
RFC4-208ENST00000447345 BFARQ9NZS9 450 aa11.75□□□□□ -0.53
RFC4-208ENST00000447345 TBC1D29Q9UFV1 150 aa11.75□□□□□ -0.53
RFC4-208ENST00000447345 SLC23A2Q9UGH3 650 aa11.75□□□□□ -0.53
RFC4-208ENST00000447345 PCYOX1Q9UHG3 505 aa11.75□□□□□ -0.53
RFC4-208ENST00000447345 RABGEF1Q9UJ41 708 aa11.75□□□□□ -0.53
RFC4-208ENST00000447345 ANGPTL2Q9UKU9 493 aa11.75□□□□□ -0.53
RFC4-208ENST00000447345 RNF215Q9Y6U7 377 aa11.75□□□□□ -0.53
RFC4-208ENST00000447345 PDZK1P1A8MUH7 402 aa11.74□□□□□ -0.53
RFC4-208ENST00000447345 H7C0S8 307 aa11.74□□□□□ -0.53
RFC4-208ENST00000447345 CCDC188H7C350 402 aa11.74□□□□□ -0.53
RFC4-208ENST00000447345 OPA1O60313 960 aa11.74□□□□□ -0.53
RFC4-208ENST00000447345 GOT2P00505 430 aaKnown RBP11.74□□□□□ -0.53
RFC4-208ENST00000447345 RALBP11234 206 aa11.74□□□□□ -0.53
RFC4-208ENST00000447345 ZNF7P17097 686 aaPredicted RBP11.74□□□□□ -0.53
RFC4-208ENST00000447345 ACRV1P26436 265 aa11.74□□□□□ -0.53
RFC4-208ENST00000447345 NMBRP28336 390 aa11.74□□□□□ -0.53
RFC4-208ENST00000447345 MAGEA6P43360 314 aa11.74□□□□□ -0.53
RFC4-208ENST00000447345 DRG2P55039 364 aaKnown RBP11.74□□□□□ -0.53
RFC4-208ENST00000447345 PRAMEP78395 509 aa11.74□□□□□ -0.53
RFC4-208ENST00000447345 SARNPP82979 210 aaKnown RBP11.74□□□□□ -0.53
RFC4-208ENST00000447345 CDK16Q00536 496 aa11.74□□□□□ -0.53
RFC4-208ENST00000447345 B4GALNT1Q00973 533 aa11.74□□□□□ -0.53
RFC4-208ENST00000447345 INSM1Q01101 510 aaPredicted RBP11.74□□□□□ -0.53
RFC4-208ENST00000447345 CACNG1Q06432 222 aa11.74□□□□□ -0.53
RFC4-208ENST00000447345 ILKQ13418 452 aa11.74□□□□□ -0.53
RFC4-208ENST00000447345 LAMB3Q13751 1172 aa11.74□□□□□ -0.53
RFC4-208ENST00000447345 HLTFQ14527 1009 aaKnown RBP eCLIP11.74□□□□□ -0.53
RFC4-208ENST00000447345 DBN1Q16643 649 aa11.74□□□□□ -0.53
RFC4-208ENST00000447345 PCID2Q5JVF3 399 aa11.74□□□□□ -0.53
RFC4-208ENST00000447345 IZUMO3Q5VZ72 239 aa11.74□□□□□ -0.53
RFC4-208ENST00000447345 TMEM220Q6QAJ8 160 aa11.74□□□□□ -0.53
RFC4-208ENST00000447345 AFTPHQ6ULP2 937 aa11.74□□□□□ -0.53
RFC4-208ENST00000447345 ZNF761Q86XN6 746 aaPredicted RBP11.74□□□□□ -0.53
RFC4-208ENST00000447345 JAMLQ86YT9 394 aa11.74□□□□□ -0.53
RFC4-208ENST00000447345 PPIL6Q8IXY8 311 aa11.74□□□□□ -0.53
RFC4-208ENST00000447345 PIANPQ8IYJ0 282 aa11.74□□□□□ -0.53
RFC4-208ENST00000447345 ARL14Q8N4G2 192 aa11.74□□□□□ -0.53
RFC4-208ENST00000447345 Q8N9G6 341 aaPredicted RBP11.74□□□□□ -0.53
RFC4-208ENST00000447345 OR6P1Q8NGX9 317 aa11.74□□□□□ -0.53
RFC4-208ENST00000447345 SLC37A2Q8TED4 501 aa11.74□□□□□ -0.53
RFC4-208ENST00000447345 SLCO2A1Q92959 643 aa11.74□□□□□ -0.53
RFC4-208ENST00000447345 SERPINB12Q96P63 405 aa11.74□□□□□ -0.53
RFC4-208ENST00000447345 TRIM56Q9BRZ2 755 aaKnown RBP11.74□□□□□ -0.53
RFC4-208ENST00000447345 TIMM29Q9BSF4 260 aa11.74□□□□□ -0.53
RFC4-208ENST00000447345 TRIM31Q9BZY9 425 aa11.74□□□□□ -0.53
RFC4-208ENST00000447345 ABCG4Q9H172 646 aa11.74□□□□□ -0.53
RFC4-208ENST00000447345 PRDM8Q9NQV8 689 aa11.74□□□□□ -0.53
RFC4-208ENST00000447345 WASF3Q9UPY6 502 aa11.74□□□□□ -0.53
RFC4-208ENST00000447345 RHPN2P1A8MT19 583 aa11.73□□□□□ -0.53
RFC4-208ENST00000447345 AGAP14A8MT82 685 aa11.73□□□□□ -0.53
RFC4-208ENST00000447345 CFAP99D6REC4 459 aa11.73□□□□□ -0.53
RFC4-208ENST00000447345 AP3B1O00203 1094 aa11.73□□□□□ -0.53
RFC4-208ENST00000447345 DNALI1O14645 258 aaPredicted RBP11.73□□□□□ -0.53
RFC4-208ENST00000447345 RPLP0P05388 317 aaKnown RBP11.73□□□□□ -0.53
RFC4-208ENST00000447345 GP1BAP07359 652 aa11.73□□□□□ -0.53
RFC4-208ENST00000447345 VCLP18206 1134 aa11.73□□□□□ -0.53
RFC4-208ENST00000447345 RPL10P27635 214 aaKnown RBP11.73□□□□□ -0.53
RFC4-208ENST00000447345 FOXN2P32314 431 aa11.73□□□□□ -0.53
RFC4-208ENST00000447345 NPY2RP49146 381 aa11.73□□□□□ -0.53
RFC4-208ENST00000447345 PPM1FP49593 454 aaPredicted RBP11.73□□□□□ -0.53
RFC4-208ENST00000447345 FOXK2Q01167 660 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms