RNA–Protein interactions for RNA: ENST00000447283.6

GNE-203, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 5 BASIC

Gene GNE, Length 2,174 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-203ENST00000447283 CDH13P55290 713 aa11.35□□□□□ -0.59
GNE-203ENST00000447283 TWF1Q12792 350 aa11.35□□□□□ -0.59
GNE-203ENST00000447283 GRB7Q14451 532 aa11.35□□□□□ -0.59
GNE-203ENST00000447283 PIM3Q86V86 326 aa11.35□□□□□ -0.59
GNE-203ENST00000447283 PTGR2Q8N8N7 351 aaPredicted RBP11.35□□□□□ -0.59
GNE-203ENST00000447283 HDAC10Q969S8 669 aa11.35□□□□□ -0.59
GNE-203ENST00000447283 LRRC58Q96CX6 371 aa11.35□□□□□ -0.59
GNE-203ENST00000447283 NPLQ9BXD5 320 aaPredicted RBP11.35□□□□□ -0.59
GNE-203ENST00000447283 PBX4Q9BYU1 374 aa11.35□□□□□ -0.59
GNE-203ENST00000447283 TRIM54Q9BYV2 358 aa11.35□□□□□ -0.59
GNE-203ENST00000447283 IL1RL2Q9HB29 575 aa11.35□□□□□ -0.59
GNE-203ENST00000447283 MARCH4Q9P2E8 410 aaPredicted RBP11.35□□□□□ -0.59
GNE-203ENST00000447283 MSRAQ9UJ68 235 aa11.35□□□□□ -0.59
GNE-203ENST00000447283 FAF1Q9UNN5 650 aaPredicted RBP11.35□□□□□ -0.59
GNE-203ENST00000447283 YBX2Q9Y2T7 364 aaKnown RBP11.35□□□□□ -0.59
GNE-203ENST00000447283 INSL5Q9Y5Q6 135 aa11.35□□□□□ -0.59
GNE-203ENST00000447283 LAMA3Q16787 3333 aa11.35□□□□□ -0.59
GNE-203ENST00000447283 ANKRD36A6QL64 1941 aa11.35□□□□□ -0.59
GNE-203ENST00000447283 RNF103-CHMP3A0A140T963 221 aa11.35□□□□□ -0.59
GNE-203ENST00000447283 FAM149AA5PLN7 773 aa11.35□□□□□ -0.59
GNE-203ENST00000447283 MMP2P08253 660 aa11.35□□□□□ -0.59
GNE-203ENST00000447283 ZDHHC11BP0C7U3 371 aa11.35□□□□□ -0.59
GNE-203ENST00000447283 HMGA1P17096 107 aaKnown RBP11.35□□□□□ -0.59
GNE-203ENST00000447283 LBPP18428 481 aa11.35□□□□□ -0.59
GNE-203ENST00000447283 UGT1A6P19224 532 aa11.35□□□□□ -0.59
GNE-203ENST00000447283 OXTRP30559 389 aa11.35□□□□□ -0.59
GNE-203ENST00000447283 STT3AP46977 705 aa11.35□□□□□ -0.59
GNE-203ENST00000447283 MRPL19P49406 292 aaKnown RBP11.35□□□□□ -0.59
GNE-203ENST00000447283 SUOXP51687 545 aa11.35□□□□□ -0.59
GNE-203ENST00000447283 PLD1Q13393 1074 aa11.35□□□□□ -0.59
GNE-203ENST00000447283 TMED1Q13445 227 aa11.35□□□□□ -0.59
GNE-203ENST00000447283 GPM6BQ13491 265 aa11.35□□□□□ -0.59
GNE-203ENST00000447283 CAMK1Q14012 370 aa11.35□□□□□ -0.59
GNE-203ENST00000447283 BLOC1S3Q6QNY0 202 aa11.35□□□□□ -0.59
GNE-203ENST00000447283 CCDC149Q6ZUS6 474 aa11.35□□□□□ -0.59
GNE-203ENST00000447283 LYSMD3Q7Z3D4 306 aa11.35□□□□□ -0.59
GNE-203ENST00000447283 RAB44Q7Z6P3 723 aaPredicted RBP11.35□□□□□ -0.59
GNE-203ENST00000447283 C14orf80Q86SX3 495 aa11.35□□□□□ -0.59
GNE-203ENST00000447283 PTRH1Q86Y79 214 aaKnown RBP11.35□□□□□ -0.59
GNE-203ENST00000447283 UMODL1-AS1Q8N2C9 162 aa11.35□□□□□ -0.59
GNE-203ENST00000447283 PNPLA1Q8N8W4 532 aa11.35□□□□□ -0.59
GNE-203ENST00000447283 TERB1Q8NA31 727 aa11.35□□□□□ -0.59
GNE-203ENST00000447283 PAPD5Q8NDF8 572 aaKnown RBP11.35□□□□□ -0.59
GNE-203ENST00000447283 PDZD8Q8NEN9 1154 aa11.35□□□□□ -0.59
GNE-203ENST00000447283 OR6P1Q8NGX9 317 aa11.35□□□□□ -0.59
GNE-203ENST00000447283 RHEBL1Q8TAI7 183 aa11.35□□□□□ -0.59
GNE-203ENST00000447283 SH3RF2Q8TEC5 729 aa11.35□□□□□ -0.59
GNE-203ENST00000447283 CASP10Q92851 521 aa11.35□□□□□ -0.59
GNE-203ENST00000447283 HSPBAP1Q96EW2 488 aa11.35□□□□□ -0.59
GNE-203ENST00000447283 POPDC3Q9HBV1 291 aa11.35□□□□□ -0.59
GNE-203ENST00000447283 MID1IP1Q9NPA3 183 aa11.35□□□□□ -0.59
GNE-203ENST00000447283 NT5MQ9NPB1 228 aa11.35□□□□□ -0.59
GNE-203ENST00000447283 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.35□□□□□ -0.59
GNE-203ENST00000447283 MPP6Q9NZW5 540 aa11.35□□□□□ -0.59
GNE-203ENST00000447283 EGFL7Q9UHF1 273 aa11.35□□□□□ -0.59
GNE-203ENST00000447283 NUDT5Q9UKK9 219 aa11.35□□□□□ -0.59
GNE-203ENST00000447283 OAZ3Q9UMX2 235 aa11.35□□□□□ -0.59
GNE-203ENST00000447283 HS3ST4Q9Y661 456 aa11.35□□□□□ -0.59
GNE-203ENST00000447283 H3BNC9 293 aa11.34□□□□□ -0.59
GNE-203ENST00000447283 MSI1O43347 362 aaKnown RBP11.34□□□□□ -0.59
GNE-203ENST00000447283 VPS4BO75351 444 aa11.34□□□□□ -0.59
GNE-203ENST00000447283 IMPDH2P12268 514 aa11.34□□□□□ -0.59
GNE-203ENST00000447283 MTHFD2P13995 350 aa11.34□□□□□ -0.59
GNE-203ENST00000447283 IDO1P14902 403 aa11.34□□□□□ -0.59
GNE-203ENST00000447283 DCKP27707 260 aa11.34□□□□□ -0.59
GNE-203ENST00000447283 CD86P42081 329 aa11.34□□□□□ -0.59
GNE-203ENST00000447283 ENTPD1P49961 510 aa11.34□□□□□ -0.59
GNE-203ENST00000447283 MLLT6P55198 1093 aaPredicted RBP11.34□□□□□ -0.59
GNE-203ENST00000447283 TIAL1Q01085 375 aaKnown RBP eCLIP11.34□□□□□ -0.59
GNE-203ENST00000447283 ACVR1Q04771 509 aa11.34□□□□□ -0.59
GNE-203ENST00000447283 TNK2Q07912 1038 aa11.34□□□□□ -0.59
GNE-203ENST00000447283 CAPRIN1Q14444 709 aaKnown RBP11.34□□□□□ -0.59
GNE-203ENST00000447283 PDE12Q6L8Q7 609 aaKnown RBP11.34□□□□□ -0.59
GNE-203ENST00000447283 OGFOD2Q6N063 350 aa11.34□□□□□ -0.59
GNE-203ENST00000447283 DUS1LQ6P1R4 473 aaKnown RBP11.34□□□□□ -0.59
GNE-203ENST00000447283 ABRAXAS1Q6UWZ7 409 aa11.34□□□□□ -0.59
GNE-203ENST00000447283 Q6ZNX1 250 aa11.34□□□□□ -0.59
GNE-203ENST00000447283 DNAJB7Q7Z6W7 309 aaPredicted RBP11.34□□□□□ -0.59
GNE-203ENST00000447283 LDB1Q86U70 411 aaPredicted RBP11.34□□□□□ -0.59
GNE-203ENST00000447283 ITIH5Q86UX2 942 aa11.34□□□□□ -0.59
GNE-203ENST00000447283 RBM12BQ8IXT5 1001 aaKnown RBP11.34□□□□□ -0.59
GNE-203ENST00000447283 KREMEN2Q8NCW0 462 aa11.34□□□□□ -0.59
GNE-203ENST00000447283 OR52K2Q8NGK3 314 aa11.34□□□□□ -0.59
GNE-203ENST00000447283 OVCA2Q8WZ82 227 aa11.34□□□□□ -0.59
GNE-203ENST00000447283 TMEM125Q96AQ2 219 aa11.34□□□□□ -0.59
GNE-203ENST00000447283 TADA1Q96BN2 335 aa11.34□□□□□ -0.59
GNE-203ENST00000447283 C1orf74Q96LT6 269 aa11.34□□□□□ -0.59
GNE-203ENST00000447283 YTHDF1Q9BYJ9 559 aaKnown RBP11.34□□□□□ -0.59
GNE-203ENST00000447283 MUC3BQ9H195 1237 aa11.34□□□□□ -0.59
GNE-203ENST00000447283 TUBB1Q9H4B7 451 aa11.34□□□□□ -0.59
GNE-203ENST00000447283 CXorf21Q9HAI6 301 aa11.34□□□□□ -0.59
GNE-203ENST00000447283 OLA1Q9NTK5 396 aaKnown RBP11.34□□□□□ -0.59
GNE-203ENST00000447283 FAIMQ9NVQ4 179 aa11.34□□□□□ -0.59
GNE-203ENST00000447283 PTGDR2Q9Y5Y4 395 aa11.34□□□□□ -0.59
GNE-203ENST00000447283 MYO16Q9Y6X6 1858 aa11.34□□□□□ -0.59
GNE-203ENST00000447283 TCRBV5S2A0A599 114 aa11.34□□□□□ -0.59
GNE-203ENST00000447283 TRIM64BA6NI03 449 aa11.34□□□□□ -0.59
GNE-203ENST00000447283 PPP6CO00743 305 aa11.34□□□□□ -0.59
GNE-203ENST00000447283 CLOCKO15516 846 aa11.34□□□□□ -0.59
GNE-203ENST00000447283 LDB2O43679 373 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms