RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 STRA8Q7Z7C7 330 aa17.77■□□□□ 0.44
TRAPPC4-203ENST00000447216 RBFAQ8N0V3 343 aa17.77■□□□□ 0.44
TRAPPC4-203ENST00000447216 OR56A4Q8NGH8 313 aa17.77■□□□□ 0.44
TRAPPC4-203ENST00000447216 FAM174AQ8TBP5 190 aa17.77■□□□□ 0.44
TRAPPC4-203ENST00000447216 TSACCQ96A04 125 aaPredicted RBP17.77■□□□□ 0.44
TRAPPC4-203ENST00000447216 SGF29Q96ES7 293 aa17.77■□□□□ 0.44
TRAPPC4-203ENST00000447216 PDXPQ96GD0 296 aa17.77■□□□□ 0.44
TRAPPC4-203ENST00000447216 ATXN7L3BQ96GX2 97 aa17.77■□□□□ 0.44
TRAPPC4-203ENST00000447216 ARRDC1-AS1Q9H2J1 176 aa17.77■□□□□ 0.44
TRAPPC4-203ENST00000447216 SMOC1Q9H4F8 434 aa17.77■□□□□ 0.44
TRAPPC4-203ENST00000447216 INTS10Q9NVR2 710 aaKnown RBP17.77■□□□□ 0.44
TRAPPC4-203ENST00000447216 SUSD2Q9UGT4 822 aa17.77■□□□□ 0.44
TRAPPC4-203ENST00000447216 PRKAB1Q9Y478 270 aa17.77■□□□□ 0.44
TRAPPC4-203ENST00000447216 CABIN1Q9Y6J0 2220 aa17.77■□□□□ 0.44
TRAPPC4-203ENST00000447216 PCDH15Q96QU1 1955 aa17.77■□□□□ 0.43
TRAPPC4-203ENST00000447216 SPTY2D1-AS1A0A0U1RR47 76 aa17.76■□□□□ 0.43
TRAPPC4-203ENST00000447216 EXOC1LA0A1B0GW35 172 aa17.76■□□□□ 0.43
TRAPPC4-203ENST00000447216 OR2AG2A6NM03 316 aa17.76■□□□□ 0.43
TRAPPC4-203ENST00000447216 PRR5-ARHGAP8B1AHC4 643 aa17.76■□□□□ 0.43
TRAPPC4-203ENST00000447216 CFAP99D6REC4 459 aa17.76■□□□□ 0.43
TRAPPC4-203ENST00000447216 SGTAO43765 313 aa17.76■□□□□ 0.43
TRAPPC4-203ENST00000447216 VEGFDO43915 354 aa17.76■□□□□ 0.43
TRAPPC4-203ENST00000447216 CFIP05156 583 aa17.76■□□□□ 0.43
TRAPPC4-203ENST00000447216 RALBP11234 206 aa17.76■□□□□ 0.43
TRAPPC4-203ENST00000447216 ATP1B2P14415 290 aaPredicted RBP17.76■□□□□ 0.43
TRAPPC4-203ENST00000447216 ZNF7P17097 686 aaPredicted RBP17.76■□□□□ 0.43
TRAPPC4-203ENST00000447216 KELP23276 732 aa17.76■□□□□ 0.43
TRAPPC4-203ENST00000447216 LEPRP48357 1165 aaKnown RBP17.76■□□□□ 0.43
TRAPPC4-203ENST00000447216 CD151P48509 253 aa17.76■□□□□ 0.43
TRAPPC4-203ENST00000447216 C21orf59P57076 290 aa17.76■□□□□ 0.43
TRAPPC4-203ENST00000447216 NXPH1P58417 271 aa17.76■□□□□ 0.43
TRAPPC4-203ENST00000447216 BNC1Q01954 994 aa17.76■□□□□ 0.43
TRAPPC4-203ENST00000447216 EIF2B5Q13144 721 aaKnown RBP17.76■□□□□ 0.43
TRAPPC4-203ENST00000447216 GTF2H3Q13889 308 aa17.76■□□□□ 0.43
TRAPPC4-203ENST00000447216 PTK2BQ14289 1009 aa17.76■□□□□ 0.43
TRAPPC4-203ENST00000447216 TEAD4Q15561 434 aa17.76■□□□□ 0.43
TRAPPC4-203ENST00000447216 ALG11Q2TAA5 492 aa17.76■□□□□ 0.43
TRAPPC4-203ENST00000447216 RNF187Q5TA31 235 aaPredicted RBP17.76■□□□□ 0.43
TRAPPC4-203ENST00000447216 FBXO38Q6PIJ6 1188 aa17.76■□□□□ 0.43
TRAPPC4-203ENST00000447216 TMEM220Q6QAJ8 160 aa17.76■□□□□ 0.43
TRAPPC4-203ENST00000447216 CRTC3Q6UUV7 619 aa17.76■□□□□ 0.43
TRAPPC4-203ENST00000447216 PACS1Q6VY07 963 aa17.76■□□□□ 0.43
TRAPPC4-203ENST00000447216 KIAA0408Q6ZU52 694 aa17.76■□□□□ 0.43
TRAPPC4-203ENST00000447216 RD3Q7Z3Z2 195 aa17.76■□□□□ 0.43
TRAPPC4-203ENST00000447216 SLC26A11Q86WA9 606 aa17.76■□□□□ 0.43
TRAPPC4-203ENST00000447216 SUMF1Q8NBK3 374 aa17.76■□□□□ 0.43
TRAPPC4-203ENST00000447216 OR2W6PQ8NHA6 318 aa17.76■□□□□ 0.43
TRAPPC4-203ENST00000447216 HNRNPLLQ8WVV9 542 aaKnown RBP17.76■□□□□ 0.43
TRAPPC4-203ENST00000447216 LOXL4Q96JB6 756 aa17.76■□□□□ 0.43
TRAPPC4-203ENST00000447216 ZCCHC2Q9C0B9 1178 aaKnown RBP17.76■□□□□ 0.43
TRAPPC4-203ENST00000447216 CLPBQ9H078 707 aa17.76■□□□□ 0.43
TRAPPC4-203ENST00000447216 CYP4F12Q9HCS2 524 aa17.76■□□□□ 0.43
TRAPPC4-203ENST00000447216 VPS18Q9P253 973 aa17.76■□□□□ 0.43
TRAPPC4-203ENST00000447216 KLQ9UEF7 1012 aa17.76■□□□□ 0.43
TRAPPC4-203ENST00000447216 SLC17A4Q9Y2C5 497 aa17.76■□□□□ 0.43
TRAPPC4-203ENST00000447216 ANKRD6Q9Y2G4 727 aa17.76■□□□□ 0.43
TRAPPC4-203ENST00000447216 PRSS38A1L453 326 aa17.75■□□□□ 0.43
TRAPPC4-203ENST00000447216 PRMT5O14744 637 aaPredicted RBP17.75■□□□□ 0.43
TRAPPC4-203ENST00000447216 PFDN6O15212 129 aa17.75■□□□□ 0.43
TRAPPC4-203ENST00000447216 NUAK1O60285 661 aa17.75■□□□□ 0.43
TRAPPC4-203ENST00000447216 DNAJC6O75061 913 aa17.75■□□□□ 0.43
TRAPPC4-203ENST00000447216 ITGB6P18564 788 aa17.75■□□□□ 0.43
TRAPPC4-203ENST00000447216 MPLP40238 635 aa17.75■□□□□ 0.43
TRAPPC4-203ENST00000447216 NSG1P42857 185 aa17.75■□□□□ 0.43
TRAPPC4-203ENST00000447216 SRP54P61011 504 aaKnown RBP17.75■□□□□ 0.43
TRAPPC4-203ENST00000447216 OVGP1Q12889 678 aa17.75■□□□□ 0.43
TRAPPC4-203ENST00000447216 NAB1Q13506 487 aa17.75■□□□□ 0.43
TRAPPC4-203ENST00000447216 TCEA2Q15560 299 aa17.75■□□□□ 0.43
TRAPPC4-203ENST00000447216 DUOXA1Q1HG43 343 aa17.75■□□□□ 0.43
TRAPPC4-203ENST00000447216 KLHL38Q2WGJ6 581 aa17.75■□□□□ 0.43
TRAPPC4-203ENST00000447216 PLA2G4EQ3MJ16 856 aa17.75■□□□□ 0.43
TRAPPC4-203ENST00000447216 CTSL3PQ5NE16 218 aa17.75■□□□□ 0.43
TRAPPC4-203ENST00000447216 PRAMEF14Q5SWL7 426 aa17.75■□□□□ 0.43
TRAPPC4-203ENST00000447216 RBM20Q5T481 1227 aaKnown RBP17.75■□□□□ 0.43
TRAPPC4-203ENST00000447216 LAIR1Q6GTX8 287 aa17.75■□□□□ 0.43
TRAPPC4-203ENST00000447216 ZNF549Q6P9A3 640 aa17.75■□□□□ 0.43
TRAPPC4-203ENST00000447216 LRRC6Q86X45 466 aa17.75■□□□□ 0.43
TRAPPC4-203ENST00000447216 DCP2Q8IU60 420 aaKnown RBP17.75■□□□□ 0.43
TRAPPC4-203ENST00000447216 TRAPPC5Q8IUR0 188 aa17.75■□□□□ 0.43
TRAPPC4-203ENST00000447216 HID1Q8IV36 788 aa17.75■□□□□ 0.43
TRAPPC4-203ENST00000447216 SPNS2Q8IVW8 549 aa17.75■□□□□ 0.43
TRAPPC4-203ENST00000447216 BEND7Q8N7W2 519 aaPredicted RBP17.75■□□□□ 0.43
TRAPPC4-203ENST00000447216 LKAAEAR1Q8TD35 194 aa17.75■□□□□ 0.43
TRAPPC4-203ENST00000447216 HEXDCQ8WVB3 486 aa17.75■□□□□ 0.43
TRAPPC4-203ENST00000447216 PAFAH2Q99487 392 aa17.75■□□□□ 0.43
TRAPPC4-203ENST00000447216 CPNE1Q99829 537 aa17.75■□□□□ 0.43
TRAPPC4-203ENST00000447216 P2RY12Q9H244 342 aa17.75■□□□□ 0.43
TRAPPC4-203ENST00000447216 TCEAL2Q9H3H9 227 aaPredicted RBP17.75■□□□□ 0.43
TRAPPC4-203ENST00000447216 NSMCE4AQ9NXX6 385 aa17.75■□□□□ 0.43
TRAPPC4-203ENST00000447216 ZNHIT2Q9UHR6 403 aa17.75■□□□□ 0.43
TRAPPC4-203ENST00000447216 SUFUQ9UMX1 484 aa17.75■□□□□ 0.43
TRAPPC4-203ENST00000447216 PLAAQ9Y263 795 aa17.75■□□□□ 0.43
TRAPPC4-203ENST00000447216 USP34Q70CQ2 3546 aa17.75■□□□□ 0.43
TRAPPC4-203ENST00000447216 IQCF5A8MTL0 148 aa17.74■□□□□ 0.43
TRAPPC4-203ENST00000447216 MAGEC1O60732 1142 aa17.74■□□□□ 0.43
TRAPPC4-203ENST00000447216 IVLP07476 585 aa17.74■□□□□ 0.43
TRAPPC4-203ENST00000447216 RPS3P23396 243 aaKnown RBP eCLIP17.74■□□□□ 0.432e-8■■■■■ 45.7
TRAPPC4-203ENST00000447216 GCAP28676 217 aa17.74■□□□□ 0.43
TRAPPC4-203ENST00000447216 PBLDP30039 288 aaPredicted RBP17.74■□□□□ 0.43
TRAPPC4-203ENST00000447216 GP5P40197 560 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms