RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 RCOR3Q9P2K3 495 aaPredicted RBP7.82□□□□□ -1.16
SMG1-202ENST00000446231 TNFRSF11BO00300 401 aa7.82□□□□□ -1.16
SMG1-202ENST00000446231 ERP29P30040 261 aaKnown RBP7.82□□□□□ -1.16
SMG1-202ENST00000446231 TXNL4AP83876 142 aaKnown RBP7.82□□□□□ -1.16
SMG1-202ENST00000446231 SYT16Q17RD7 645 aa7.82□□□□□ -1.16
SMG1-202ENST00000446231 HACD2Q6Y1H2 254 aa7.82□□□□□ -1.16
SMG1-202ENST00000446231 GSDMCQ9BYG8 508 aa7.82□□□□□ -1.16
SMG1-202ENST00000446231 NFKB1P19838 968 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 FAM122CQ6P4D5 195 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 BTN2A1Q7KYR7 527 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 COL21A1Q96P44 957 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 ARHGEF33A8MVX0 844 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 SLC28A1O00337 649 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 HPRP00739 348 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 MYL3P08590 195 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 IMPDH1P20839 514 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 CDC42EP1Q00587 391 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 SPP2Q13103 211 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 ZC3HC1Q86WB0 502 aaKnown RBP7.81□□□□□ -1.16
SMG1-202ENST00000446231 ZIM2Q9NZV7 527 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 CLCA2Q9UQC9 943 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 COL6A1P12109 1028 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 KLF1Q13351 362 aaPredicted RBP7.81□□□□□ -1.16
SMG1-202ENST00000446231 GCNT6Q5T4J0 391 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 TXNDC11Q6PKC3 985 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 NAPRTQ6XQN6 538 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 NKAPQ8N5F7 415 aaKnown RBP7.81□□□□□ -1.16
SMG1-202ENST00000446231 DDX4Q9NQI0 724 aaKnown RBP7.81□□□□□ -1.16
SMG1-202ENST00000446231 NPAP1Q9NZP6 1156 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 CASKO14936 926 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 PGRMC2O15173 223 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 NDST3O95803 873 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 ITGB6P18564 788 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 GNPDA1P46926 289 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 HERVK_113P63132 956 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 FOXM1Q08050 763 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 NOTUMQ6P988 496 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 TIGD4Q8IY51 512 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 ERVK-6Q9BXR3 956 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 GPR88Q9GZN0 384 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 PXMP2Q9NR77 195 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 PCDHB3Q9Y5E6 796 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 PNPLA4P41247 253 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 RPA4Q13156 261 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 DESI1Q6ICB0 168 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 OR52J3Q8NH60 311 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 TWIST2Q8WVJ9 160 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 DNAJA4Q8WW22 397 aaPredicted RBP7.81□□□□□ -1.16
SMG1-202ENST00000446231 BSNDQ8WZ55 320 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 SLC38A2Q96QD8 506 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 TM9SF3Q9HD45 589 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 SLC27A5Q9Y2P5 690 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 TMEM233B4DJY2 109 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 IL1R2P27930 398 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 RCVRNP35243 200 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 WNT3AP56704 352 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 MTPNP58546 118 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 PIGFQ07326 219 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 TTLL4Q14679 1199 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 SNAPC1Q16533 368 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 EFCAB12Q6NXP0 572 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 DPP9Q86TI2 863 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 OR5H6Q8NGV6 325 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 PCDHGB6Q9Y5F9 930 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 ALDH3B2P48448 385 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 DEFA5Q01523 94 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 STARD3Q14849 445 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 BPIFB1Q8TDL5 484 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 MALT1Q9UDY8 824 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 UPK1BO75841 260 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 ABI1Q8IZP0 508 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 OR10T2Q8NGX3 314 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 AFG1LQ8WV93 481 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 ZDHHC2Q9UIJ5 367 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 H7C0S8 307 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 CCNB2O95067 398 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 SNX4O95219 450 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 ALDOAP04075 364 aaKnown RBP7.81□□□□□ -1.16
SMG1-202ENST00000446231 ARSFP54793 590 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 PTPN5P54829 565 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 PCDH19Q8TAB3 1148 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 LGALS12Q96DT0 336 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 TIGARQ9NQ88 270 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 CNTN6Q9UQ52 1028 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 E9PAM4 449 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 PPP5CP53041 499 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 LAPTM5Q13571 262 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 ARHGEF7Q14155 803 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 PM20D2Q8IYS1 436 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 ELMOD1Q8N336 334 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 SRFBP1Q8NEF9 429 aaKnown RBP7.81□□□□□ -1.16
SMG1-202ENST00000446231 LMTK2Q8IWU2 1503 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 BUD23O43709 281 aaKnown RBP7.81□□□□□ -1.16
SMG1-202ENST00000446231 LYPLA2O95372 231 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 USP17L7P0C7H9 530 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 GRM3Q14832 879 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 PPP1R3AQ16821 1122 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 HMBOX1Q6NT76 420 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 VN1R5Q7Z5H4 357 aa7.81□□□□□ -1.16
SMG1-202ENST00000446231 CAND1Q86VP6 1230 aaKnown RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms