RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 COMPP49747 757 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P48-201ENST00000446155 SUOXP51687 545 aa4.45□□□□□ -1.7
HMGB1P48-201ENST00000446155 BMXP51813 675 aa4.45□□□□□ -1.7
HMGB1P48-201ENST00000446155 CAPZA1P52907 286 aa4.45□□□□□ -1.7
HMGB1P48-201ENST00000446155 FOXG1P55316 489 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P48-201ENST00000446155 KRTAP10-11P60412 298 aa4.45□□□□□ -1.7
HMGB1P48-201ENST00000446155 CXCL9Q07325 125 aa4.45□□□□□ -1.7
HMGB1P48-201ENST00000446155 KCNC3Q14003 757 aa4.45□□□□□ -1.7
HMGB1P48-201ENST00000446155 NHSL2Q5HYW2 709 aa4.45□□□□□ -1.7
HMGB1P48-201ENST00000446155 ZNF549Q6P9A3 640 aa4.45□□□□□ -1.7
HMGB1P48-201ENST00000446155 MSANTD1Q6ZTZ1 278 aa4.45□□□□□ -1.7
HMGB1P48-201ENST00000446155 ADCK2Q7Z695 626 aa4.45□□□□□ -1.7
HMGB1P48-201ENST00000446155 IQCHQ86VS3 1027 aa4.45□□□□□ -1.7
HMGB1P48-201ENST00000446155 TUSC5Q8IXB3 177 aa4.45□□□□□ -1.7
HMGB1P48-201ENST00000446155 RNF168Q8IYW5 571 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P48-201ENST00000446155 SIX6OS1Q8N1H7 587 aa4.45□□□□□ -1.7
HMGB1P48-201ENST00000446155 PARP16Q8N5Y8 322 aa4.45□□□□□ -1.7
HMGB1P48-201ENST00000446155 IQUBQ8NA54 791 aa4.45□□□□□ -1.7
HMGB1P48-201ENST00000446155 CAMKVQ8NCB2 501 aa4.45□□□□□ -1.7
HMGB1P48-201ENST00000446155 B4GALNT2Q8NHY0 566 aa4.45□□□□□ -1.7
HMGB1P48-201ENST00000446155 TEKT4Q8WW24 435 aa4.45□□□□□ -1.7
HMGB1P48-201ENST00000446155 OIT3Q8WWZ8 545 aa4.45□□□□□ -1.7
HMGB1P48-201ENST00000446155 LPGAT1Q92604 370 aa4.45□□□□□ -1.7
HMGB1P48-201ENST00000446155 SEPT5Q99719 369 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P48-201ENST00000446155 FERMT1Q9BQL6 677 aa4.45□□□□□ -1.7
HMGB1P48-201ENST00000446155 MGME1Q9BQP7 344 aa4.45□□□□□ -1.7
HMGB1P48-201ENST00000446155 C1QTNF5Q9BXJ0 243 aa4.45□□□□□ -1.7
HMGB1P48-201ENST00000446155 EBF3Q9H4W6 596 aa4.45□□□□□ -1.7
HMGB1P48-201ENST00000446155 MRPL44Q9H9J2 332 aaKnown RBP4.45□□□□□ -1.7
HMGB1P48-201ENST00000446155 MID1IP1Q9NPA3 183 aa4.45□□□□□ -1.7
HMGB1P48-201ENST00000446155 CYSLTR2Q9NS75 346 aa4.45□□□□□ -1.7
HMGB1P48-201ENST00000446155 FZD10Q9ULW2 581 aa4.45□□□□□ -1.7
HMGB1P48-201ENST00000446155 LIPT1Q9Y234 373 aa4.45□□□□□ -1.7
HMGB1P48-201ENST00000446155 NFE2L3Q9Y4A8 694 aa4.45□□□□□ -1.7
HMGB1P48-201ENST00000446155 MAU2Q9Y6X3 613 aa4.45□□□□□ -1.7
HMGB1P48-201ENST00000446155 IGSF1Q8N6C5 1336 aa4.45□□□□□ -1.7
HMGB1P48-201ENST00000446155 OR6C75A6NL08 312 aa4.44□□□□□ -1.7
HMGB1P48-201ENST00000446155 J3KR12 359 aa4.44□□□□□ -1.7
HMGB1P48-201ENST00000446155 SPRY1O43609 319 aaPredicted RBP4.44□□□□□ -1.7
HMGB1P48-201ENST00000446155 PLRG1O43660 514 aaKnown RBP4.44□□□□□ -1.7
HMGB1P48-201ENST00000446155 ZBTB14O43829 449 aa4.44□□□□□ -1.7
HMGB1P48-201ENST00000446155 RGS11O94810 467 aa4.44□□□□□ -1.7
HMGB1P48-201ENST00000446155 MMP2P08253 660 aa4.44□□□□□ -1.7
HMGB1P48-201ENST00000446155 TFPIP10646 304 aa4.44□□□□□ -1.7
HMGB1P48-201ENST00000446155 NAGAP17050 411 aa4.44□□□□□ -1.7
HMGB1P48-201ENST00000446155 SCP2P22307 547 aa4.44□□□□□ -1.7
HMGB1P48-201ENST00000446155 HPDP32754 393 aaPredicted RBP4.44□□□□□ -1.7
HMGB1P48-201ENST00000446155 KIF5BP33176 963 aa4.44□□□□□ -1.7
HMGB1P48-201ENST00000446155 PRKCIP41743 596 aa4.44□□□□□ -1.7
HMGB1P48-201ENST00000446155 MATR3P43243 847 aaKnown RBP eCLIP4.44□□□□□ -1.7
HMGB1P48-201ENST00000446155 AMTP48728 403 aa4.44□□□□□ -1.7
HMGB1P48-201ENST00000446155 TUBB4BP68371 445 aa4.44□□□□□ -1.7
HMGB1P48-201ENST00000446155 ZNF273Q14593 569 aa4.44□□□□□ -1.7
HMGB1P48-201ENST00000446155 PPA1Q15181 289 aa4.44□□□□□ -1.7
HMGB1P48-201ENST00000446155 MEP1BQ16820 701 aa4.44□□□□□ -1.7
HMGB1P48-201ENST00000446155 FSCBQ5H9T9 825 aa4.44□□□□□ -1.7
HMGB1P48-201ENST00000446155 GLRA4Q5JXX5 417 aa4.44□□□□□ -1.7
HMGB1P48-201ENST00000446155 ARMC4Q5T2S8 1044 aa4.44□□□□□ -1.7
HMGB1P48-201ENST00000446155 CES5AQ6NT32 575 aa4.44□□□□□ -1.7
HMGB1P48-201ENST00000446155 TAOK1Q7L7X3 1001 aa4.44□□□□□ -1.7
HMGB1P48-201ENST00000446155 HACE1Q8IYU2 909 aa4.44□□□□□ -1.7
HMGB1P48-201ENST00000446155 SCYL3Q8IZE3 742 aa4.44□□□□□ -1.7
HMGB1P48-201ENST00000446155 TSPAN14Q8NG11 270 aa4.44□□□□□ -1.7
HMGB1P48-201ENST00000446155 CTCFLQ8NI51 663 aaPredicted RBP4.44□□□□□ -1.7
HMGB1P48-201ENST00000446155 ARRDC2Q8TBH0 407 aa4.44□□□□□ -1.7
HMGB1P48-201ENST00000446155 ADAMTS14Q8WXS8 1223 aa4.44□□□□□ -1.7
HMGB1P48-201ENST00000446155 CORO2AQ92828 525 aa4.44□□□□□ -1.7
HMGB1P48-201ENST00000446155 MOAP1Q96BY2 351 aa4.44□□□□□ -1.7
HMGB1P48-201ENST00000446155 FBXL8Q96CD0 374 aa4.44□□□□□ -1.7
HMGB1P48-201ENST00000446155 AK8Q96MA6 479 aa4.44□□□□□ -1.7
HMGB1P48-201ENST00000446155 CEP295NLQ96MC4 621 aa4.44□□□□□ -1.7
HMGB1P48-201ENST00000446155 ATP6V0BQ99437 205 aa4.44□□□□□ -1.7
HMGB1P48-201ENST00000446155 MLPHQ9BV36 600 aaPredicted RBP4.44□□□□□ -1.7
HMGB1P48-201ENST00000446155 GPR88Q9GZN0 384 aa4.44□□□□□ -1.7
HMGB1P48-201ENST00000446155 TKTL2Q9H0I9 626 aa4.44□□□□□ -1.7
HMGB1P48-201ENST00000446155 ABCG4Q9H172 646 aa4.44□□□□□ -1.7
HMGB1P48-201ENST00000446155 TMEM51Q9NW97 253 aa4.44□□□□□ -1.7
HMGB1P48-201ENST00000446155 PAG1Q9NWQ8 432 aa4.44□□□□□ -1.7
HMGB1P48-201ENST00000446155 HAO2Q9NYQ3 351 aa4.44□□□□□ -1.7
HMGB1P48-201ENST00000446155 R3HDM2Q9Y2K5 976 aaKnown RBP4.44□□□□□ -1.7
HMGB1P48-201ENST00000446155 MTF2Q9Y483 593 aaPredicted RBP4.44□□□□□ -1.7
HMGB1P48-201ENST00000446155 LSM4Q9Y4Z0 139 aaKnown RBP4.44□□□□□ -1.7
HMGB1P48-201ENST00000446155 LIPGQ9Y5X9 500 aa4.44□□□□□ -1.7
HMGB1P48-201ENST00000446155 EDDM13A0A1B0GTR0 161 aa4.43□□□□□ -1.7
HMGB1P48-201ENST00000446155 CCDC69A6NI79 296 aa4.43□□□□□ -1.7
HMGB1P48-201ENST00000446155 ENO4A6NNW6 628 aa4.43□□□□□ -1.7
HMGB1P48-201ENST00000446155 KDM4EB2RXH2 506 aaPredicted RBP4.43□□□□□ -1.7
HMGB1P48-201ENST00000446155 CCDC188H7C350 402 aa4.43□□□□□ -1.7
HMGB1P48-201ENST00000446155 TIMM23O14925 209 aa4.43□□□□□ -1.7
HMGB1P48-201ENST00000446155 ZNF263O14978 683 aa4.43□□□□□ -1.7
HMGB1P48-201ENST00000446155 GPC4O75487 556 aa4.43□□□□□ -1.7
HMGB1P48-201ENST00000446155 TRUB2O95900 331 aaKnown RBP4.43□□□□□ -1.7
HMGB1P48-201ENST00000446155 BCL10O95999 233 aa4.43□□□□□ -1.7
HMGB1P48-201ENST00000446155 SLC4A1P02730 911 aa4.43□□□□□ -1.7
HMGB1P48-201ENST00000446155 CBSLP0DN79 551 aa4.43□□□□□ -1.7
HMGB1P48-201ENST00000446155 ETFAP13804 333 aa4.43□□□□□ -1.7
HMGB1P48-201ENST00000446155 DESP17661 470 aa4.43□□□□□ -1.7
HMGB1P48-201ENST00000446155 ANXA7P20073 488 aaKnown RBP4.43□□□□□ -1.7
HMGB1P48-201ENST00000446155 CASTP20810 708 aaKnown RBP4.43□□□□□ -1.7
HMGB1P48-201ENST00000446155 LMO1P25800 156 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms