RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 GLT6D1Q7Z4J2 308 aa10.72□□□□□ -0.69
SF3A1-203ENST00000444440 ZFAND4Q86XD8 727 aa10.72□□□□□ -0.69
SF3A1-203ENST00000444440 PHYKPLQ8IUZ5 450 aa10.72□□□□□ -0.69
SF3A1-203ENST00000444440 CCDC110Q8TBZ0 833 aa10.72□□□□□ -0.69
SF3A1-203ENST00000444440 PLEKHG4BQ96PX9 1271 aa10.72□□□□□ -0.69
SF3A1-203ENST00000444440 VPS35Q96QK1 796 aa10.72□□□□□ -0.69
SF3A1-203ENST00000444440 OSGEPL1Q9H4B0 414 aa10.72□□□□□ -0.69
SF3A1-203ENST00000444440 SARS2Q9NP81 518 aaKnown RBP10.72□□□□□ -0.69
SF3A1-203ENST00000444440 OCIAD1Q9NX40 245 aa10.72□□□□□ -0.69
SF3A1-203ENST00000444440 KCNK4Q9NYG8 393 aa10.72□□□□□ -0.69
SF3A1-203ENST00000444440 OGFRQ9NZT2 677 aa10.72□□□□□ -0.69
SF3A1-203ENST00000444440 ZNF624Q9P2J8 865 aaPredicted RBP10.72□□□□□ -0.69
SF3A1-203ENST00000444440 EFR3BQ9Y2G0 817 aa10.72□□□□□ -0.69
SF3A1-203ENST00000444440 DNAJC16Q9Y2G8 782 aa10.72□□□□□ -0.69
SF3A1-203ENST00000444440 R3HDM2Q9Y2K5 976 aaKnown RBP10.72□□□□□ -0.69
SF3A1-203ENST00000444440 CCDC88CQ9P219 2028 aa10.72□□□□□ -0.69
SF3A1-203ENST00000444440 SPTBP11277 2137 aa10.72□□□□□ -0.69
SF3A1-203ENST00000444440 OR52A4PA6NMU1 304 aa10.71□□□□□ -0.69
SF3A1-203ENST00000444440 TMX2-CTNND1H3BSU7 103 aa10.71□□□□□ -0.69
SF3A1-203ENST00000444440 NVLO15381 856 aaKnown RBP10.71□□□□□ -0.69
SF3A1-203ENST00000444440 KCNN4O15554 427 aa10.71□□□□□ -0.69
SF3A1-203ENST00000444440 NRDCO43847 1150 aa10.71□□□□□ -0.69
SF3A1-203ENST00000444440 EPOP01588 193 aa10.71□□□□□ -0.69
SF3A1-203ENST00000444440 ZNF7P17097 686 aaPredicted RBP10.71□□□□□ -0.69
SF3A1-203ENST00000444440 HLA-DPA1P20036 260 aa10.71□□□□□ -0.69
SF3A1-203ENST00000444440 GDF10P55107 478 aa10.71□□□□□ -0.69
SF3A1-203ENST00000444440 TMPRSS3P57727 454 aa10.71□□□□□ -0.69
SF3A1-203ENST00000444440 TMEM115Q12893 351 aaPredicted RBP10.71□□□□□ -0.69
SF3A1-203ENST00000444440 KLF1Q13351 362 aaPredicted RBP10.71□□□□□ -0.69
SF3A1-203ENST00000444440 SPARCL1Q14515 664 aa10.71□□□□□ -0.69
SF3A1-203ENST00000444440 SEPT7Q16181 437 aaKnown RBP10.71□□□□□ -0.69
SF3A1-203ENST00000444440 INSCQ1MX18 579 aa10.71□□□□□ -0.69
SF3A1-203ENST00000444440 CCDC181Q5TID7 509 aa10.71□□□□□ -0.69
SF3A1-203ENST00000444440 DENND5AQ6IQ26 1287 aa10.71□□□□□ -0.69
SF3A1-203ENST00000444440 CCDC70Q6NSX1 233 aa10.71□□□□□ -0.69
SF3A1-203ENST00000444440 RANBP10Q6VN20 620 aa10.71□□□□□ -0.69
SF3A1-203ENST00000444440 FAM83HQ6ZRV2 1179 aaPredicted RBP10.71□□□□□ -0.69
SF3A1-203ENST00000444440 VASH2Q86V25 355 aa10.71□□□□□ -0.69
SF3A1-203ENST00000444440 LRRTM4Q86VH4 590 aa10.71□□□□□ -0.69
SF3A1-203ENST00000444440 KLHDC8BQ8IXV7 354 aa10.71□□□□□ -0.69
SF3A1-203ENST00000444440 SYCE1Q8N0S2 351 aa10.71□□□□□ -0.69
SF3A1-203ENST00000444440 BMPERQ8N8U9 685 aa10.71□□□□□ -0.69
SF3A1-203ENST00000444440 RASGEF1AQ8N9B8 481 aa10.71□□□□□ -0.69
SF3A1-203ENST00000444440 OR4D9Q8NGE8 314 aa10.71□□□□□ -0.69
SF3A1-203ENST00000444440 UBE2Q2Q8WVN8 375 aa10.71□□□□□ -0.69
SF3A1-203ENST00000444440 UBL7Q96S82 380 aaPredicted RBP10.71□□□□□ -0.69
SF3A1-203ENST00000444440 SLC38A3Q99624 504 aa10.71□□□□□ -0.69
SF3A1-203ENST00000444440 TRABDQ9H4I3 376 aa10.71□□□□□ -0.69
SF3A1-203ENST00000444440 PDP2Q9P2J9 529 aa10.71□□□□□ -0.69
SF3A1-203ENST00000444440 CPNE7Q9UBL6 633 aa10.71□□□□□ -0.69
SF3A1-203ENST00000444440 ACSL6Q9UKU0 697 aa10.71□□□□□ -0.69
SF3A1-203ENST00000444440 TRHDEQ9UKU6 1024 aa10.71□□□□□ -0.69
SF3A1-203ENST00000444440 WDR37Q9Y2I8 494 aa10.71□□□□□ -0.69
SF3A1-203ENST00000444440 SLC30A1Q9Y6M5 507 aa10.71□□□□□ -0.69
SF3A1-203ENST00000444440 COL6A6A6NMZ7 2263 aa10.7□□□□□ -0.7
SF3A1-203ENST00000444440 FER1L5A0AVI2 2057 aa10.7□□□□□ -0.7
SF3A1-203ENST00000444440 CFAP46Q8IYW2 2715 aa10.7□□□□□ -0.7
SF3A1-203ENST00000444440 TEX51A0A1B0GUA7 166 aa10.7□□□□□ -0.7
SF3A1-203ENST00000444440 A8MU76 341 aa10.7□□□□□ -0.7
SF3A1-203ENST00000444440 K7ENP7 123 aa10.7□□□□□ -0.7
SF3A1-203ENST00000444440 CCL22O00626 93 aa10.7□□□□□ -0.7
SF3A1-203ENST00000444440 KMOO15229 486 aa10.7□□□□□ -0.7
SF3A1-203ENST00000444440 ATXN7O15265 892 aaPredicted RBP10.7□□□□□ -0.7
SF3A1-203ENST00000444440 CDK14O94921 469 aa10.7□□□□□ -0.7
SF3A1-203ENST00000444440 RPL10P27635 214 aaKnown RBP10.7□□□□□ -0.7
SF3A1-203ENST00000444440 SPAM1P38567 509 aa10.7□□□□□ -0.7
SF3A1-203ENST00000444440 SLC19A1P41440 591 aa10.7□□□□□ -0.7
SF3A1-203ENST00000444440 MAPK9P45984 424 aa10.7□□□□□ -0.7
SF3A1-203ENST00000444440 DRG2P55039 364 aaKnown RBP10.7□□□□□ -0.7
SF3A1-203ENST00000444440 GEMP55040 296 aa10.7□□□□□ -0.7
SF3A1-203ENST00000444440 GFERP55789 205 aa10.7□□□□□ -0.7
SF3A1-203ENST00000444440 VAC14Q08AM6 782 aa10.7□□□□□ -0.7
SF3A1-203ENST00000444440 BIRC2Q13490 618 aa10.7□□□□□ -0.7
SF3A1-203ENST00000444440 PEX6Q13608 980 aa10.7□□□□□ -0.7
SF3A1-203ENST00000444440 CLCA4Q14CN2 919 aa10.7□□□□□ -0.7
SF3A1-203ENST00000444440 SNAP47Q5SQN1 464 aa10.7□□□□□ -0.7
SF3A1-203ENST00000444440 BROXQ5VW32 411 aa10.7□□□□□ -0.7
SF3A1-203ENST00000444440 TMEM71Q6P5X7 295 aa10.7□□□□□ -0.7
SF3A1-203ENST00000444440 DARS2Q6PI48 645 aaKnown RBP10.7□□□□□ -0.7
SF3A1-203ENST00000444440 INO80CQ6PI98 192 aaPredicted RBP10.7□□□□□ -0.7
SF3A1-203ENST00000444440 DTX1Q86Y01 620 aa10.7□□□□□ -0.7
SF3A1-203ENST00000444440 CDKL3Q8IVW4 592 aaPredicted RBP10.7□□□□□ -0.7
SF3A1-203ENST00000444440 CCDC112Q8NEF3 446 aa10.7□□□□□ -0.7
SF3A1-203ENST00000444440 OR13C4Q8NGS5 318 aa10.7□□□□□ -0.7
SF3A1-203ENST00000444440 GPR150Q8NGU9 434 aa10.7□□□□□ -0.7
SF3A1-203ENST00000444440 SNRNP27Q8WVK2 155 aaKnown RBP10.7□□□□□ -0.7
SF3A1-203ENST00000444440 JPH3Q8WXH2 748 aaPredicted RBP10.7□□□□□ -0.7
SF3A1-203ENST00000444440 TTC9Q92623 222 aa10.7□□□□□ -0.7
SF3A1-203ENST00000444440 RNF31Q96EP0 1072 aa10.7□□□□□ -0.7
SF3A1-203ENST00000444440 HES6Q96HZ4 224 aa10.7□□□□□ -0.7
SF3A1-203ENST00000444440 SPATA13Q96N96 652 aa10.7□□□□□ -0.7
SF3A1-203ENST00000444440 CMKLR1Q99788 373 aa10.7□□□□□ -0.7
SF3A1-203ENST00000444440 FERMT1Q9BQL6 677 aa10.7□□□□□ -0.7
SF3A1-203ENST00000444440 TIMM29Q9BSF4 260 aa10.7□□□□□ -0.7
SF3A1-203ENST00000444440 FSD1LQ9BXM9 530 aa10.7□□□□□ -0.7
SF3A1-203ENST00000444440 SEMA4CQ9C0C4 833 aa10.7□□□□□ -0.7
SF3A1-203ENST00000444440 RAD18Q9NS91 495 aa10.7□□□□□ -0.7
SF3A1-203ENST00000444440 FKBPLQ9UIM3 349 aa10.7□□□□□ -0.7
SF3A1-203ENST00000444440 AMFRQ9UKV5 643 aa10.7□□□□□ -0.7
SF3A1-203ENST00000444440 B3GALT1Q9Y5Z6 326 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms