RNA–Protein interactions for RNA: ENST00000443816.5

FN1-211, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-211ENST00000443816 TRAF6Q9Y4K3 522 aa11.14□□□□□ -0.63
FN1-211ENST00000443816 COL6A1P12109 1028 aa11.14□□□□□ -0.63
FN1-211ENST00000443816 LAMP2P13473 410 aa11.14□□□□□ -0.63
FN1-211ENST00000443816 RPL17P18621 184 aaKnown RBP11.14□□□□□ -0.63
FN1-211ENST00000443816 GRB14Q14449 540 aa11.14□□□□□ -0.63
FN1-211ENST00000443816 DLG2Q15700 870 aa11.14□□□□□ -0.63
FN1-211ENST00000443816 UAP1L1Q3KQV9 507 aa11.14□□□□□ -0.63
FN1-211ENST00000443816 DUPD1Q68J44 220 aa11.14□□□□□ -0.63
FN1-211ENST00000443816 FAM43BQ6ZT52 329 aaPredicted RBP11.14□□□□□ -0.63
FN1-211ENST00000443816 BEND5Q7L4P6 421 aa11.14□□□□□ -0.63
FN1-211ENST00000443816 LNX1Q8TBB1 728 aaPredicted RBP11.14□□□□□ -0.63
FN1-211ENST00000443816 ENKURQ8TC29 256 aa11.14□□□□□ -0.63
FN1-211ENST00000443816 SLC2A4RGQ9NR83 387 aa11.14□□□□□ -0.63
FN1-211ENST00000443816 CALML5Q9NZT1 146 aa11.14□□□□□ -0.63
FN1-211ENST00000443816 KHDRBS3O75525 346 aaKnown RBP11.13□□□□□ -0.63
FN1-211ENST00000443816 SAGP10523 405 aaPredicted RBP11.13□□□□□ -0.63
FN1-211ENST00000443816 ADSLP30566 484 aaPredicted RBP11.13□□□□□ -0.63
FN1-211ENST00000443816 CSTF2P33240 577 aaKnown RBP eCLIP11.13□□□□□ -0.63
FN1-211ENST00000443816 WDR45BQ5MNZ6 344 aa11.13□□□□□ -0.63
FN1-211ENST00000443816 BRAT1Q6PJG6 821 aa11.13□□□□□ -0.63
FN1-211ENST00000443816 ENPP7Q6UWV6 458 aa11.13□□□□□ -0.63
FN1-211ENST00000443816 TRPV3Q8NET8 790 aa11.13□□□□□ -0.63
FN1-211ENST00000443816 SLC47A1Q96FL8 570 aa11.13□□□□□ -0.63
FN1-211ENST00000443816 PGM2Q96G03 612 aa11.13□□□□□ -0.63
FN1-211ENST00000443816 MARK4Q96L34 752 aa11.13□□□□□ -0.63
FN1-211ENST00000443816 C12orf66Q96MD2 445 aa11.13□□□□□ -0.63
FN1-211ENST00000443816 GSDMCQ9BYG8 508 aa11.13□□□□□ -0.63
FN1-211ENST00000443816 ABCG8Q9H221 673 aa11.13□□□□□ -0.63
FN1-211ENST00000443816 SH3GLB1Q9Y371 365 aa11.13□□□□□ -0.63
FN1-211ENST00000443816 ECM29Q5VYK3 1845 aa11.13□□□□□ -0.63
FN1-211ENST00000443816 FER1L6Q2WGJ9 1857 aa11.13□□□□□ -0.63
FN1-211ENST00000443816 MYBPHLA2RUH7 354 aa11.13□□□□□ -0.63
FN1-211ENST00000443816 BBIP1A8MTZ0 92 aa11.13□□□□□ -0.63
FN1-211ENST00000443816 FGF18O76093 207 aa11.13□□□□□ -0.63
FN1-211ENST00000443816 TGDSO95455 350 aa11.13□□□□□ -0.63
FN1-211ENST00000443816 LYNP07948 512 aa11.13□□□□□ -0.63
FN1-211ENST00000443816 MTHFRP42898 656 aa11.13□□□□□ -0.63
FN1-211ENST00000443816 IZUMO2Q6UXV1 221 aa11.13□□□□□ -0.63
FN1-211ENST00000443816 AP3S1Q92572 193 aa11.13□□□□□ -0.63
FN1-211ENST00000443816 SIPA1Q96FS4 1042 aa11.13□□□□□ -0.63
FN1-211ENST00000443816 FBXL12Q9NXK8 326 aa11.13□□□□□ -0.63
FN1-211ENST00000443816 SAMHD1Q9Y3Z3 626 aaKnown RBP11.13□□□□□ -0.63
FN1-211ENST00000443816 POLR3HQ9Y535 204 aaPredicted RBP11.13□□□□□ -0.63
FN1-211ENST00000443816 CCKBRP32239 447 aa11.13□□□□□ -0.63
FN1-211ENST00000443816 KLHL12Q53G59 568 aa11.13□□□□□ -0.63
FN1-211ENST00000443816 ZNF776Q68DI1 518 aaPredicted RBP11.13□□□□□ -0.63
FN1-211ENST00000443816 FUT8Q9BYC5 575 aa11.13□□□□□ -0.63
FN1-211ENST00000443816 WDR26Q9H7D7 661 aa11.13□□□□□ -0.63
FN1-211ENST00000443816 ARMCX1Q9P291 453 aa11.13□□□□□ -0.63
FN1-211ENST00000443816 HDAC3O15379 428 aa11.13□□□□□ -0.63
FN1-211ENST00000443816 CYB5AP00167 134 aa11.13□□□□□ -0.63
FN1-211ENST00000443816 ADH1BP00325 375 aa11.13□□□□□ -0.63
FN1-211ENST00000443816 TSPAN8P19075 237 aa11.13□□□□□ -0.63
FN1-211ENST00000443816 NRIP1P48552 1158 aa11.13□□□□□ -0.63
FN1-211ENST00000443816 GTF2H2Q13888 395 aa11.13□□□□□ -0.63
FN1-211ENST00000443816 FAM91A1Q658Y4 838 aa11.13□□□□□ -0.63
FN1-211ENST00000443816 GTF2H2CQ6P1K8 395 aa11.13□□□□□ -0.63
FN1-211ENST00000443816 SLC30A9Q6PML9 568 aa11.13□□□□□ -0.63
FN1-211ENST00000443816 TSPAN14Q8NG11 270 aa11.13□□□□□ -0.63
FN1-211ENST00000443816 GINS4Q9BRT9 223 aa11.13□□□□□ -0.63
FN1-211ENST00000443816 INTS10Q9NVR2 710 aaKnown RBP11.13□□□□□ -0.63
FN1-211ENST00000443816 HMGXB4Q9UGU5 601 aa11.13□□□□□ -0.63
FN1-211ENST00000443816 PCDHB3Q9Y5E6 796 aa11.13□□□□□ -0.63
FN1-211ENST00000443816 FAM237BA0A1B0GVD1 139 aa11.13□□□□□ -0.63
FN1-211ENST00000443816 WFS1O76024 890 aa11.13□□□□□ -0.63
FN1-211ENST00000443816 CST1P01037 141 aa11.13□□□□□ -0.63
FN1-211ENST00000443816 CTSOP43234 321 aaPredicted RBP11.13□□□□□ -0.63
FN1-211ENST00000443816 CARD16Q5EG05 197 aa11.13□□□□□ -0.63
FN1-211ENST00000443816 KLHL17Q6TDP4 642 aa11.13□□□□□ -0.63
FN1-211ENST00000443816 MON1BQ7L1V2 547 aa11.13□□□□□ -0.63
FN1-211ENST00000443816 SERPINA9Q86WD7 417 aa11.13□□□□□ -0.63
FN1-211ENST00000443816 RTL3Q8N8U3 475 aaKnown RBP11.13□□□□□ -0.63
FN1-211ENST00000443816 ZSCAN5AQ9BUG6 496 aa11.13□□□□□ -0.63
FN1-211ENST00000443816 TAPBPLQ9BX59 468 aa11.13□□□□□ -0.63
FN1-211ENST00000443816 GRIN2DO15399 1336 aa11.13□□□□□ -0.63
FN1-211ENST00000443816 LAMA4Q16363 1823 aa11.13□□□□□ -0.63
FN1-211ENST00000443816 ACADLP28330 430 aa11.13□□□□□ -0.63
FN1-211ENST00000443816 PTGER3P43115 390 aa11.13□□□□□ -0.63
FN1-211ENST00000443816 SNX20Q7Z614 316 aa11.13□□□□□ -0.63
FN1-211ENST00000443816 C10orf107Q8IVU9 208 aa11.13□□□□□ -0.63
FN1-211ENST00000443816 SLC9A6Q92581 669 aa11.13□□□□□ -0.63
FN1-211ENST00000443816 RPL10LQ96L21 214 aaKnown RBP11.13□□□□□ -0.63
FN1-211ENST00000443816 TCF12Q99081 682 aa11.13□□□□□ -0.63
FN1-211ENST00000443816 FAM192AQ9GZU8 254 aa11.13□□□□□ -0.63
FN1-211ENST00000443816 ZNF304Q9HCX3 659 aa11.13□□□□□ -0.63
FN1-211ENST00000443816 FZD10Q9ULW2 581 aa11.13□□□□□ -0.63
FN1-211ENST00000443816 GMPPBQ9Y5P6 360 aa11.13□□□□□ -0.63
FN1-211ENST00000443816 PPP1R11O60927 126 aaPredicted RBP11.12□□□□□ -0.63
FN1-211ENST00000443816 TAS2R40P59535 323 aa11.12□□□□□ -0.63
FN1-211ENST00000443816 ARHGAP1Q07960 439 aa11.12□□□□□ -0.63
FN1-211ENST00000443816 IRF2BP2Q7Z5L9 587 aa11.12□□□□□ -0.63
FN1-211ENST00000443816 RANBP3LQ86VV4 465 aaPredicted RBP11.12□□□□□ -0.63
FN1-211ENST00000443816 SLC4A11Q8NBS3 891 aa11.12□□□□□ -0.63
FN1-211ENST00000443816 ATP6V1C2Q8NEY4 427 aa11.12□□□□□ -0.63
FN1-211ENST00000443816 STK32AQ8WU08 396 aa11.12□□□□□ -0.63
FN1-211ENST00000443816 EFHD2Q96C19 240 aaPredicted RBP11.12□□□□□ -0.63
FN1-211ENST00000443816 C8orf4Q9NR00 106 aa11.12□□□□□ -0.63
FN1-211ENST00000443816 OSER1Q9NX31 292 aa11.12□□□□□ -0.63
FN1-211ENST00000443816 COL20A1Q9P218 1284 aa11.12□□□□□ -0.63
FN1-211ENST00000443816 L1RE1Q9UN81 338 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms