RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 CHRNA6Q15825 494 aa14.15□□□□□ -0.14
HMGN1-208ENST00000443046 WASH2PQ6VEQ5 465 aa14.15□□□□□ -0.14
HMGN1-208ENST00000443046 ADGRG6Q86SQ4 1221 aa14.15□□□□□ -0.14
HMGN1-208ENST00000443046 HPS6Q86YV9 775 aa14.15□□□□□ -0.14
HMGN1-208ENST00000443046 RBM12BQ8IXT5 1001 aaKnown RBP14.15□□□□□ -0.14
HMGN1-208ENST00000443046 PRR7Q8TB68 274 aa14.15□□□□□ -0.14
HMGN1-208ENST00000443046 FATE1Q969F0 183 aa14.15□□□□□ -0.14
HMGN1-208ENST00000443046 ERGIC2Q96RQ1 377 aa14.15□□□□□ -0.14
HMGN1-208ENST00000443046 OR2AG1Q9H205 316 aa14.15□□□□□ -0.14
HMGN1-208ENST00000443046 WASH6PQ9NQA3 447 aa14.15□□□□□ -0.14
HMGN1-208ENST00000443046 ACSS2Q9NR19 701 aa14.15□□□□□ -0.14
HMGN1-208ENST00000443046 POT1Q9NUX5 634 aa14.15□□□□□ -0.14
HMGN1-208ENST00000443046 DTLQ9NZJ0 730 aa14.15□□□□□ -0.14
HMGN1-208ENST00000443046 RARRES3Q9UL19 164 aa14.15□□□□□ -0.14
HMGN1-208ENST00000443046 DCHS2Q6V1P9 2916 aa14.14□□□□□ -0.15
HMGN1-208ENST00000443046 IGHV5-51A0A0C4DH38 117 aa14.14□□□□□ -0.15
HMGN1-208ENST00000443046 C1orf232A0A0U1RR37 186 aa14.14□□□□□ -0.15
HMGN1-208ENST00000443046 LRRC10BA6NIK2 292 aa14.14□□□□□ -0.15
HMGN1-208ENST00000443046 ARGFXA6NJG6 315 aa14.14□□□□□ -0.15
HMGN1-208ENST00000443046 TMCO5BA8MYB1 307 aa14.14□□□□□ -0.15
HMGN1-208ENST00000443046 DPM1O60762 260 aa14.14□□□□□ -0.15
HMGN1-208ENST00000443046 ZNF7P17097 686 aaPredicted RBP14.14□□□□□ -0.15
HMGN1-208ENST00000443046 IL4RP24394 825 aa14.14□□□□□ -0.15
HMGN1-208ENST00000443046 TNFRSF8P28908 595 aa14.14□□□□□ -0.15
HMGN1-208ENST00000443046 SERPINB6P35237 376 aa14.14□□□□□ -0.15
HMGN1-208ENST00000443046 PPP1CAP62136 330 aa14.14□□□□□ -0.15
HMGN1-208ENST00000443046 RPS15P62841 145 aaKnown RBP14.14□□□□□ -0.15
HMGN1-208ENST00000443046 NIPAL4Q0D2K0 466 aa14.14□□□□□ -0.15
HMGN1-208ENST00000443046 TUBB3Q13509 450 aa14.14□□□□□ -0.15
HMGN1-208ENST00000443046 GPR18Q14330 331 aa14.14□□□□□ -0.15
HMGN1-208ENST00000443046 SMTNL2Q2TAL5 461 aa14.14□□□□□ -0.15
HMGN1-208ENST00000443046 ANKRD20A8PQ5CZ79 823 aa14.14□□□□□ -0.15
HMGN1-208ENST00000443046 ZNF648Q5T619 568 aaPredicted RBP14.14□□□□□ -0.15
HMGN1-208ENST00000443046 AGAP9Q5VTM2 703 aa14.14□□□□□ -0.15
HMGN1-208ENST00000443046 C1QL3Q5VWW1 255 aa14.14□□□□□ -0.15
HMGN1-208ENST00000443046 IZUMO3Q5VZ72 239 aa14.14□□□□□ -0.15
HMGN1-208ENST00000443046 FAM92BQ6ZTR7 304 aa14.14□□□□□ -0.15
HMGN1-208ENST00000443046 ZNF547Q8IVP9 402 aa14.14□□□□□ -0.15
HMGN1-208ENST00000443046 TRIM48Q8IWZ4 208 aa14.14□□□□□ -0.15
HMGN1-208ENST00000443046 RBMXL3Q8N7X1 1067 aaKnown RBP14.14□□□□□ -0.15
HMGN1-208ENST00000443046 PNPLA2Q96AD5 504 aa14.14□□□□□ -0.15
HMGN1-208ENST00000443046 TIMM29Q9BSF4 260 aa14.14□□□□□ -0.15
HMGN1-208ENST00000443046 SLC29A3Q9BZD2 475 aa14.14□□□□□ -0.15
HMGN1-208ENST00000443046 OSGEPL1Q9H4B0 414 aa14.14□□□□□ -0.15
HMGN1-208ENST00000443046 PCDH9Q9HC56 1237 aa14.14□□□□□ -0.15
HMGN1-208ENST00000443046 PCDH18Q9HCL0 1135 aa14.14□□□□□ -0.15
HMGN1-208ENST00000443046 ARFGAP3Q9NP61 516 aa14.14□□□□□ -0.15
HMGN1-208ENST00000443046 FANCLQ9NW38 375 aa14.14□□□□□ -0.15
HMGN1-208ENST00000443046 PKD2L2Q9NZM6 624 aa14.14□□□□□ -0.15
HMGN1-208ENST00000443046 AMACRQ9UHK6 382 aa14.14□□□□□ -0.15
HMGN1-208ENST00000443046 FARSAQ9Y285 508 aaKnown RBP14.14□□□□□ -0.15
HMGN1-208ENST00000443046 SEC16AO15027 2179 aa14.13□□□□□ -0.15
HMGN1-208ENST00000443046 SSU72P8A0A1W2PR75 194 aa14.13□□□□□ -0.15
HMGN1-208ENST00000443046 LGALS16A8MUM7 142 aa14.13□□□□□ -0.15
HMGN1-208ENST00000443046 KMOO15229 486 aa14.13□□□□□ -0.15
HMGN1-208ENST00000443046 MATN3O15232 486 aa14.13□□□□□ -0.15
HMGN1-208ENST00000443046 CBX6O95503 412 aa14.13□□□□□ -0.15
HMGN1-208ENST00000443046 TPM2P07951 284 aa14.13□□□□□ -0.15
HMGN1-208ENST00000443046 CCDC172P0C7W6 258 aa14.13□□□□□ -0.15
HMGN1-208ENST00000443046 RARAP10276 462 aa14.13□□□□□ -0.15
HMGN1-208ENST00000443046 GZMAP12544 262 aa14.13□□□□□ -0.15
HMGN1-208ENST00000443046 POU3F2P20265 443 aaPredicted RBP14.13□□□□□ -0.15
HMGN1-208ENST00000443046 PTGIRP43119 386 aa14.13□□□□□ -0.15
HMGN1-208ENST00000443046 ITKQ08881 620 aa14.13□□□□□ -0.15
HMGN1-208ENST00000443046 GALNT2Q10471 571 aa14.13□□□□□ -0.15
HMGN1-208ENST00000443046 QPCTQ16769 361 aa14.13□□□□□ -0.15
HMGN1-208ENST00000443046 SLC6A19Q695T7 634 aa14.13□□□□□ -0.15
HMGN1-208ENST00000443046 TXNRD3NBQ6F5E7 133 aa14.13□□□□□ -0.15
HMGN1-208ENST00000443046 C11orf96Q7Z7L8 435 aa14.13□□□□□ -0.15
HMGN1-208ENST00000443046 LPCAT1Q8NF37 534 aa14.13□□□□□ -0.15
HMGN1-208ENST00000443046 FAM71BQ8TC56 605 aa14.13□□□□□ -0.15
HMGN1-208ENST00000443046 TEKT4Q8WW24 435 aa14.13□□□□□ -0.15
HMGN1-208ENST00000443046 UBXN4Q92575 508 aa14.13□□□□□ -0.15
HMGN1-208ENST00000443046 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.13□□□□□ -0.15
HMGN1-208ENST00000443046 NFKBIL1Q9UBC1 381 aaPredicted RBP14.13□□□□□ -0.15
HMGN1-208ENST00000443046 LIMA1Q9UHB6 759 aaKnown RBP14.13□□□□□ -0.15
HMGN1-208ENST00000443046 ZFHX3Q15911 3703 aa14.13□□□□□ -0.15
HMGN1-208ENST00000443046 C2CD3Q4AC94 2353 aa14.12□□□□□ -0.15
HMGN1-208ENST00000443046 SPTBP11277 2137 aa14.12□□□□□ -0.15
HMGN1-208ENST00000443046 OR52A4PA6NMU1 304 aa14.12□□□□□ -0.15
HMGN1-208ENST00000443046 ANKRD66B4E2M5 251 aa14.12□□□□□ -0.15
HMGN1-208ENST00000443046 MTA2O94776 668 aa14.12□□□□□ -0.15
HMGN1-208ENST00000443046 SLC25A14O95258 325 aaPredicted RBP14.12□□□□□ -0.15
HMGN1-208ENST00000443046 JCHAINP01591 159 aa14.12□□□□□ -0.15
HMGN1-208ENST00000443046 FTLP02792 175 aaPredicted RBP14.12□□□□□ -0.15
HMGN1-208ENST00000443046 MMP2P08253 660 aa14.12□□□□□ -0.15
HMGN1-208ENST00000443046 DCDC1P59894 354 aa14.12□□□□□ -0.15
HMGN1-208ENST00000443046 ACY1Q03154 408 aa14.12□□□□□ -0.15
HMGN1-208ENST00000443046 KCNAB1Q14722 419 aa14.12□□□□□ -0.15
HMGN1-208ENST00000443046 PDPK2PQ6A1A2 396 aa14.12□□□□□ -0.15
HMGN1-208ENST00000443046 IRGCQ6NXR0 463 aa14.12□□□□□ -0.15
HMGN1-208ENST00000443046 APTXQ7Z2E3 356 aaKnown RBP14.12□□□□□ -0.15
HMGN1-208ENST00000443046 LRRTM4Q86VH4 590 aa14.12□□□□□ -0.15
HMGN1-208ENST00000443046 KMT5CQ86Y97 462 aa14.12□□□□□ -0.15
HMGN1-208ENST00000443046 RHOT1Q8IXI2 618 aa14.12□□□□□ -0.15
HMGN1-208ENST00000443046 D2HGDHQ8N465 521 aa14.12□□□□□ -0.15
HMGN1-208ENST00000443046 GLIS1Q8NBF1 620 aa14.12□□□□□ -0.15
HMGN1-208ENST00000443046 SIDT2Q8NBJ9 832 aaKnown RBP14.12□□□□□ -0.15
HMGN1-208ENST00000443046 SLC38A9Q8NBW4 561 aa14.12□□□□□ -0.15
HMGN1-208ENST00000443046 GPR26Q8NDV2 337 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms