RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 WDR70Q9NW82 654 aa20.77■□□□□ 0.92
CDKN3-204ENST00000442975 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.77■□□□□ 0.922e-9■■□□□ 12.2
CDKN3-204ENST00000442975 SLC23A2Q9UGH3 650 aa20.77■□□□□ 0.92
CDKN3-204ENST00000442975 FKBPLQ9UIM3 349 aa20.77■□□□□ 0.92
CDKN3-204ENST00000442975 IGHV1OR21-1A0A087WYE8 117 aa20.76■□□□□ 0.91
CDKN3-204ENST00000442975 A6NCN8 305 aa20.76■□□□□ 0.91
CDKN3-204ENST00000442975 CHUKO15111 745 aa20.76■□□□□ 0.91
CDKN3-204ENST00000442975 METTL18O95568 372 aa20.76■□□□□ 0.91
CDKN3-204ENST00000442975 ZNF7P17097 686 aaPredicted RBP20.76■□□□□ 0.91
CDKN3-204ENST00000442975 CSF2RBP32927 897 aa20.76■□□□□ 0.91
CDKN3-204ENST00000442975 ZFP36L1Q07352 338 aaKnown RBP20.76■□□□□ 0.91
CDKN3-204ENST00000442975 PARP6Q2NL67 630 aa20.76■□□□□ 0.91
CDKN3-204ENST00000442975 P3H1Q32P28 736 aa20.76■□□□□ 0.91
CDKN3-204ENST00000442975 GPRC6AQ5T6X5 926 aa20.76■□□□□ 0.91
CDKN3-204ENST00000442975 IYDQ6PHW0 289 aa20.76■□□□□ 0.91
CDKN3-204ENST00000442975 IGF2-ASQ6U949 168 aa20.76■□□□□ 0.91
CDKN3-204ENST00000442975 SLC9B2Q86UD5 537 aa20.76■□□□□ 0.91
CDKN3-204ENST00000442975 PDZD3Q86UT5 571 aa20.76■□□□□ 0.91
CDKN3-204ENST00000442975 SLC13A5Q86YT5 568 aaPredicted RBP20.76■□□□□ 0.91
CDKN3-204ENST00000442975 ZNF547Q8IVP9 402 aa20.76■□□□□ 0.91
CDKN3-204ENST00000442975 TRIM48Q8IWZ4 208 aa20.76■□□□□ 0.91
CDKN3-204ENST00000442975 SPACA3Q8IXA5 215 aa20.76■□□□□ 0.91
CDKN3-204ENST00000442975 RCBTB1Q8NDN9 531 aa20.76■□□□□ 0.91
CDKN3-204ENST00000442975 CCDC74BQ96LY2 380 aa20.76■□□□□ 0.91
CDKN3-204ENST00000442975 CMKLR1Q99788 373 aa20.76■□□□□ 0.91
CDKN3-204ENST00000442975 TIMM29Q9BSF4 260 aa20.76■□□□□ 0.91
CDKN3-204ENST00000442975 KCTD3Q9Y597 815 aa20.76■□□□□ 0.91
CDKN3-204ENST00000442975 URB1O60287 2271 aaKnown RBP20.76■□□□□ 0.91
CDKN3-204ENST00000442975 FAM208BQ5VWN6 2430 aa20.76■□□□□ 0.91
CDKN3-204ENST00000442975 KIR2DS5A0A0G2JLQ3 304 aa20.75■□□□□ 0.91
CDKN3-204ENST00000442975 A0A0G2JNG1 304 aa20.75■□□□□ 0.91
CDKN3-204ENST00000442975 KIR2DS3K7RE56 304 aa20.75■□□□□ 0.91
CDKN3-204ENST00000442975 GAPDHSO14556 408 aaPredicted RBP20.75■□□□□ 0.91
CDKN3-204ENST00000442975 DUX1O43812 170 aa20.75■□□□□ 0.91
CDKN3-204ENST00000442975 CRTAMO95727 393 aa20.75■□□□□ 0.91
CDKN3-204ENST00000442975 VCLP18206 1134 aa20.75■□□□□ 0.91
CDKN3-204ENST00000442975 ITIH1P19827 911 aa20.75■□□□□ 0.91
CDKN3-204ENST00000442975 MPSTP25325 297 aa20.75■□□□□ 0.91
CDKN3-204ENST00000442975 CCZ1BP86790 482 aa20.75■□□□□ 0.91
CDKN3-204ENST00000442975 CCZ1P86791 482 aaPredicted RBP20.75■□□□□ 0.91
CDKN3-204ENST00000442975 TMPRSS15P98073 1019 aa20.75■□□□□ 0.91
CDKN3-204ENST00000442975 TMEM115Q12893 351 aaPredicted RBP20.75■□□□□ 0.91
CDKN3-204ENST00000442975 SEPT6Q14141 434 aa20.75■□□□□ 0.91
CDKN3-204ENST00000442975 KIR2DS5Q14953 304 aa20.75■□□□□ 0.91
CDKN3-204ENST00000442975 LDLRAP1Q5SW96 308 aa20.75■□□□□ 0.91
CDKN3-204ENST00000442975 CHCHD2P9Q5T1J5 151 aaPredicted RBP20.75■□□□□ 0.91
CDKN3-204ENST00000442975 DDHD1Q8NEL9 900 aa20.75■□□□□ 0.91
CDKN3-204ENST00000442975 OR10G6Q8NH81 332 aa20.75■□□□□ 0.91
CDKN3-204ENST00000442975 C1orf54Q8WWF1 131 aa20.75■□□□□ 0.91
CDKN3-204ENST00000442975 LRRC40Q9H9A6 602 aa20.75■□□□□ 0.91
CDKN3-204ENST00000442975 SARS2Q9NP81 518 aaKnown RBP20.75■□□□□ 0.91
CDKN3-204ENST00000442975 PIH1D1Q9NWS0 290 aaKnown RBP20.75■□□□□ 0.91
CDKN3-204ENST00000442975 AKAP7Q9P0M2 348 aaPredicted RBP20.75■□□□□ 0.91
CDKN3-204ENST00000442975 CPNE7Q9UBL6 633 aa20.75■□□□□ 0.91
CDKN3-204ENST00000442975 CDRT15L2A8MXV6 281 aa20.74■□□□□ 0.91
CDKN3-204ENST00000442975 KLK10O43240 276 aa20.74■□□□□ 0.91
CDKN3-204ENST00000442975 LIASO43766 372 aa20.74■□□□□ 0.91
CDKN3-204ENST00000442975 IFNB1P01574 187 aa20.74■□□□□ 0.91
CDKN3-204ENST00000442975 HOXB3P14651 431 aaPredicted RBP20.74■□□□□ 0.91
CDKN3-204ENST00000442975 PBLDP30039 288 aaPredicted RBP20.74■□□□□ 0.91
CDKN3-204ENST00000442975 CA5AP35218 305 aa20.74■□□□□ 0.91
CDKN3-204ENST00000442975 MLLT3P42568 568 aaPredicted RBP20.74■□□□□ 0.91
CDKN3-204ENST00000442975 MAPK10P53779 464 aa20.74■□□□□ 0.91
CDKN3-204ENST00000442975 DRG2P55039 364 aaKnown RBP20.74■□□□□ 0.91
CDKN3-204ENST00000442975 GPLD1P80108 840 aa20.74■□□□□ 0.91
CDKN3-204ENST00000442975 TLE3Q04726 772 aa20.74■□□□□ 0.91
CDKN3-204ENST00000442975 C16orf72Q14CZ0 275 aa20.74■□□□□ 0.91
CDKN3-204ENST00000442975 CLPPQ16740 277 aaPredicted RBP20.74■□□□□ 0.91
CDKN3-204ENST00000442975 MEI1Q5TIA1 1274 aa20.74■□□□□ 0.91
CDKN3-204ENST00000442975 DENND5AQ6IQ26 1287 aa20.74■□□□□ 0.91
CDKN3-204ENST00000442975 DET1Q7L5Y6 550 aa20.74■□□□□ 0.91
CDKN3-204ENST00000442975 OR13C4Q8NGS5 318 aa20.74■□□□□ 0.91
CDKN3-204ENST00000442975 DTX3LQ8TDB6 740 aa20.74■□□□□ 0.91
CDKN3-204ENST00000442975 BRSK1Q8TDC3 778 aa20.74■□□□□ 0.91
CDKN3-204ENST00000442975 TMEM9Q9P0T7 183 aa20.74■□□□□ 0.91
CDKN3-204ENST00000442975 FEZ2Q9UHY8 353 aaPredicted RBP20.74■□□□□ 0.91
CDKN3-204ENST00000442975 IGHV5-10-1A0A0J9YXX1 117 aa20.73■□□□□ 0.91
CDKN3-204ENST00000442975 OR2AG2A6NM03 316 aa20.73■□□□□ 0.91
CDKN3-204ENST00000442975 OR5K4A6NMS3 321 aa20.73■□□□□ 0.91
CDKN3-204ENST00000442975 CCL22O00626 93 aa20.73■□□□□ 0.91
CDKN3-204ENST00000442975 MSH3P20585 1137 aa20.73■□□□□ 0.91
CDKN3-204ENST00000442975 RPL10P27635 214 aaKnown RBP20.73■□□□□ 0.91
CDKN3-204ENST00000442975 CLCNKAP51800 687 aa20.73■□□□□ 0.91
CDKN3-204ENST00000442975 ZNF140P52738 457 aaPredicted RBP20.73■□□□□ 0.91
CDKN3-204ENST00000442975 CTSCP53634 463 aa20.73■□□□□ 0.91
CDKN3-204ENST00000442975 PDE1BQ01064 536 aa20.73■□□□□ 0.91
CDKN3-204ENST00000442975 SNX1Q13596 522 aa20.73■□□□□ 0.91
CDKN3-204ENST00000442975 CLEC14AQ86T13 490 aa20.73■□□□□ 0.91
CDKN3-204ENST00000442975 RASGEF1AQ8N9B8 481 aa20.73■□□□□ 0.91
CDKN3-204ENST00000442975 AVL9Q8NBF6 648 aa20.73■□□□□ 0.91
CDKN3-204ENST00000442975 ZNF398Q8TD17 642 aa20.73■□□□□ 0.91
CDKN3-204ENST00000442975 TMEM159Q96B96 161 aa20.73■□□□□ 0.91
CDKN3-204ENST00000442975 SH3KBP1Q96B97 665 aa20.73■□□□□ 0.91
CDKN3-204ENST00000442975 FRMD8P1Q9BZ68 369 aaPredicted RBP20.73■□□□□ 0.91
CDKN3-204ENST00000442975 ASB8Q9H765 288 aa20.73■□□□□ 0.91
CDKN3-204ENST00000442975 SMOXQ9NWM0 555 aa20.73■□□□□ 0.91
CDKN3-204ENST00000442975 SCHIP1Q9P0W5 487 aaPredicted RBP20.73■□□□□ 0.91
CDKN3-204ENST00000442975 CRLS1Q9UJA2 301 aa20.73■□□□□ 0.91
CDKN3-204ENST00000442975 ZNF148Q9UQR1 794 aa20.73■□□□□ 0.91
CDKN3-204ENST00000442975 SRP72O76094 671 aaKnown RBP20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms