RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 ME2P23368 584 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 KLRC2P26717 231 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 CD40LGP29965 261 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 NUP62P37198 522 aaPredicted RBP2.76□□□□□ -1.97
LIG4-203ENST00000442234 PLA2G5P39877 138 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 NSFP46459 744 aaKnown RBP2.76□□□□□ -1.97
LIG4-203ENST00000442234 FNTBP49356 437 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 ALDH7A1P49419 539 aaKnown RBP2.76□□□□□ -1.97
LIG4-203ENST00000442234 SCNN1GP51170 649 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 ARFIP1P53367 373 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 ACTR2P61160 394 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 YWHAEP62258 255 aaKnown RBP2.76□□□□□ -1.97
LIG4-203ENST00000442234 ERVK-25P63136 954 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 ACY1Q03154 408 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 FAAP100Q0VG06 881 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 BST2Q10589 180 aaKnown RBP2.76□□□□□ -1.97
LIG4-203ENST00000442234 TRAF3Q13114 568 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 PEX6Q13608 980 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 TAB1Q15750 504 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 MTX3Q5HYI7 312 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 FAM76BQ5HYJ3 339 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 CCNYL2Q5T2Q4 361 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 RETSATQ6NUM9 610 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 BHLHB9Q6PI77 547 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 BRAT1Q6PJG6 821 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 XKRXQ6PP77 449 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 RHOUQ7L0Q8 258 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 MAMDC2Q7Z304 686 aaPredicted RBP2.76□□□□□ -1.97
LIG4-203ENST00000442234 PRRT2Q7Z6L0 340 aaPredicted RBP2.76□□□□□ -1.97
LIG4-203ENST00000442234 NT5DC3Q86UY8 548 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 SLC22A9Q8IVM8 553 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 NPAS3Q8IXF0 933 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 CYP4Z2PQ8N1L4 340 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 RASGEF1CQ8N431 466 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 SVOPQ8N4V2 548 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 DHRSXQ8N5I4 330 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 OR8K5Q8NH50 307 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 AGR3Q8TD06 166 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 HEXDCQ8WVB3 486 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 DNAJB3Q8WWF6 145 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 RFFLQ8WZ73 363 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 SEC14L1Q92503 715 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 TANKQ92844 425 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 ART4Q93070 314 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 RBM18Q96H35 190 aaKnown RBP2.76□□□□□ -1.97
LIG4-203ENST00000442234 RIPOR3Q96MK2 946 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 ZNF578Q96N58 590 aaPredicted RBP2.76□□□□□ -1.97
LIG4-203ENST00000442234 CNTNAP3BQ96NU0 1288 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 TSGA13Q96PP4 275 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 NPLQ9BXD5 320 aaPredicted RBP2.76□□□□□ -1.97
LIG4-203ENST00000442234 KLF16Q9BXK1 252 aaPredicted RBP2.76□□□□□ -1.97
LIG4-203ENST00000442234 ERVK-6Q9BXR3 956 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 CNTNAP3Q9BZ76 1288 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 BCL2L14Q9BZR8 327 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 ZCCHC2Q9C0B9 1178 aaKnown RBP2.76□□□□□ -1.97
LIG4-203ENST00000442234 RHBGQ9H310 441 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 C12orf65Q9H3J6 166 aaKnown RBP2.76□□□□□ -1.97
LIG4-203ENST00000442234 ZNF556Q9HAH1 456 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 TBC1D22BQ9NU19 505 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 BABAM1Q9NWV8 329 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 WHRNQ9P202 907 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 ERVK-18Q9QC07 812 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 PGAP2Q9UHJ9 254 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 NAGPAQ9UK23 515 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 ATXN7L1Q9ULK2 861 aaPredicted RBP2.76□□□□□ -1.97
LIG4-203ENST00000442234 FAM50BQ9Y247 325 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 ANKRD6Q9Y2G4 727 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 FNDC3AQ9Y2H6 1198 aaKnown RBP2.76□□□□□ -1.97
LIG4-203ENST00000442234 ASB4Q9Y574 426 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 FPGT-TNNI3KV9GXZ4 949 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 ADAMTSL1Q8N6G6 1762 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 MYH4Q9Y623 1939 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 NFAT5O94916 1531 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 PIK3C2AO00443 1686 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 BAZ2BQ9UIF8 2168 aaKnown RBP2.76□□□□□ -1.97
LIG4-203ENST00000442234 FRMPD4Q14CM0 1322 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 STK36Q9NRP7 1315 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 MRC1P22897 1456 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 KDM3BQ7LBC6 1761 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 PNMA8CA0A1B0GUJ8 204 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 A0A1W2PPM1 405 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 KLRG2A4D1S0 409 aaPredicted RBP2.76□□□□□ -1.97
LIG4-203ENST00000442234 ARVCFO00192 962 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 NRP2O60462 931 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 ULK1O75385 1050 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 TGDSO95455 350 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 MBP02144 154 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 LTA4HP09960 611 aaKnown RBP2.76□□□□□ -1.97
LIG4-203ENST00000442234 RNF224P0DH78 156 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 CYP11B1P15538 503 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 PCSK2P16519 638 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 CYP3A5P20815 502 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 CYP2A7P20853 494 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 GTF2E2P29084 291 aaKnown RBP2.76□□□□□ -1.97
LIG4-203ENST00000442234 IRS1P35568 1242 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 CLCNKBP51801 687 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 PPP5CP53041 499 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 GALCP54803 685 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 NME5P56597 212 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 GPX6P59796 221 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms