RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 LYSMD4Q5XG99 296 aa4.73□□□□□ -1.65
EDEM3-203ENST00000439962 RD3Q7Z3Z2 195 aa4.73□□□□□ -1.65
EDEM3-203ENST00000439962 KCNMB4Q86W47 210 aa4.73□□□□□ -1.65
EDEM3-203ENST00000439962 GATAD2AQ86YP4 633 aa4.73□□□□□ -1.65
EDEM3-203ENST00000439962 PPHLN1Q8NEY8 458 aaKnown RBP4.73□□□□□ -1.65
EDEM3-203ENST00000439962 RP9Q8TA86 221 aaKnown RBP4.73□□□□□ -1.65
EDEM3-203ENST00000439962 GAB3Q8WWW8 586 aa4.73□□□□□ -1.65
EDEM3-203ENST00000439962 FAM136AQ96C01 138 aa4.73□□□□□ -1.65
EDEM3-203ENST00000439962 RNF31Q96EP0 1072 aa4.73□□□□□ -1.65
EDEM3-203ENST00000439962 BTBD9Q96Q07 612 aa4.73□□□□□ -1.65
EDEM3-203ENST00000439962 SORT1Q99523 831 aa4.73□□□□□ -1.65
EDEM3-203ENST00000439962 LGMNQ99538 433 aa4.73□□□□□ -1.65
EDEM3-203ENST00000439962 PRRX2Q99811 253 aa4.73□□□□□ -1.65
EDEM3-203ENST00000439962 GORASP1Q9BQQ3 440 aa4.73□□□□□ -1.65
EDEM3-203ENST00000439962 ILKAPQ9H0C8 392 aaPredicted RBP4.73□□□□□ -1.65
EDEM3-203ENST00000439962 ABCG8Q9H221 673 aa4.73□□□□□ -1.65
EDEM3-203ENST00000439962 IL21RQ9HBE5 538 aa4.73□□□□□ -1.65
EDEM3-203ENST00000439962 PRMT8Q9NR22 394 aaPredicted RBP4.73□□□□□ -1.65
EDEM3-203ENST00000439962 UTP6Q9NYH9 597 aaKnown RBP4.73□□□□□ -1.65
EDEM3-203ENST00000439962 THAP10Q9P2Z0 257 aaPredicted RBP4.73□□□□□ -1.65
EDEM3-203ENST00000439962 HECAQ9UBI9 543 aaPredicted RBP4.73□□□□□ -1.65
EDEM3-203ENST00000439962 MOSPD1Q9UJG1 213 aa4.73□□□□□ -1.65
EDEM3-203ENST00000439962 FBXO4Q9UKT5 387 aa4.73□□□□□ -1.65
EDEM3-203ENST00000439962 CDV3Q9UKY7 258 aaKnown RBP4.73□□□□□ -1.65
EDEM3-203ENST00000439962 TMCO1Q9UM00 188 aa4.73□□□□□ -1.65
EDEM3-203ENST00000439962 COQ6Q9Y2Z9 468 aa4.73□□□□□ -1.65
EDEM3-203ENST00000439962 L3MBTL1Q9Y468 752 aa4.73□□□□□ -1.65
EDEM3-203ENST00000439962 RELNP78509 3460 aa4.73□□□□□ -1.65
EDEM3-203ENST00000439962 KMT2EQ8IZD2 1858 aa4.73□□□□□ -1.65
EDEM3-203ENST00000439962 IGHV1OR15-9A0A0B4J2B8 117 aa4.73□□□□□ -1.65
EDEM3-203ENST00000439962 A0A1B0GVT2 93 aa4.73□□□□□ -1.65
EDEM3-203ENST00000439962 MAGEA13PA6NCF6 341 aa4.73□□□□□ -1.65
EDEM3-203ENST00000439962 ARHGAP42A6NI28 874 aa4.73□□□□□ -1.65
EDEM3-203ENST00000439962 A8MUI8 341 aa4.73□□□□□ -1.65
EDEM3-203ENST00000439962 G3V2L1 256 aa4.73□□□□□ -1.65
EDEM3-203ENST00000439962 KCNK1O00180 336 aa4.73□□□□□ -1.65
EDEM3-203ENST00000439962 WNT9AO14904 365 aa4.73□□□□□ -1.65
EDEM3-203ENST00000439962 INSIG1O15503 277 aa4.73□□□□□ -1.65
EDEM3-203ENST00000439962 CLDN11O75508 207 aa4.73□□□□□ -1.65
EDEM3-203ENST00000439962 PAK4O96013 591 aaPredicted RBP4.73□□□□□ -1.65
EDEM3-203ENST00000439962 GM2AP17900 193 aa4.73□□□□□ -1.65
EDEM3-203ENST00000439962 HSPA13P48723 471 aa4.73□□□□□ -1.65
EDEM3-203ENST00000439962 MRPL19P49406 292 aaKnown RBP4.73□□□□□ -1.65
EDEM3-203ENST00000439962 IDH3AP50213 366 aa4.73□□□□□ -1.65
EDEM3-203ENST00000439962 PPP2CBP62714 309 aa4.73□□□□□ -1.65
EDEM3-203ENST00000439962 PPP2CAP67775 309 aa4.73□□□□□ -1.65
EDEM3-203ENST00000439962 RCN2Q14257 317 aa4.73□□□□□ -1.65
EDEM3-203ENST00000439962 CST6Q15828 149 aa4.73□□□□□ -1.65
EDEM3-203ENST00000439962 MUM1Q2TAK8 710 aa4.73□□□□□ -1.65
EDEM3-203ENST00000439962 HSF5Q4G112 596 aaPredicted RBP4.73□□□□□ -1.65
EDEM3-203ENST00000439962 ACSBG2Q5FVE4 666 aa4.73□□□□□ -1.65
EDEM3-203ENST00000439962 CFAP157Q5JU67 520 aa4.73□□□□□ -1.65
EDEM3-203ENST00000439962 CASC4Q6P4E1 433 aa4.73□□□□□ -1.65
EDEM3-203ENST00000439962 PIWIL4Q7Z3Z4 852 aaKnown RBP4.73□□□□□ -1.65
EDEM3-203ENST00000439962 TTC7BQ86TV6 843 aa4.73□□□□□ -1.65
EDEM3-203ENST00000439962 ULK2Q8IYT8 1036 aa4.73□□□□□ -1.65
EDEM3-203ENST00000439962 UMODL1-AS1Q8N2C9 162 aa4.73□□□□□ -1.65
EDEM3-203ENST00000439962 CPXM2Q8N436 756 aa4.73□□□□□ -1.65
EDEM3-203ENST00000439962 NPWQ8N729 165 aa4.73□□□□□ -1.65
EDEM3-203ENST00000439962 CNTD1Q8N815 330 aa4.73□□□□□ -1.65
EDEM3-203ENST00000439962 GOLM1Q8NBJ4 401 aa4.73□□□□□ -1.65
EDEM3-203ENST00000439962 SETD7Q8WTS6 366 aaKnown RBP4.73□□□□□ -1.65
EDEM3-203ENST00000439962 STYXQ8WUJ0 223 aa4.73□□□□□ -1.65
EDEM3-203ENST00000439962 BIRC7Q96CA5 298 aa4.73□□□□□ -1.65
EDEM3-203ENST00000439962 MRRFQ96E11 262 aaKnown RBP4.73□□□□□ -1.65
EDEM3-203ENST00000439962 MYO19Q96H55 970 aa4.73□□□□□ -1.65
EDEM3-203ENST00000439962 KLF6Q99612 283 aaPredicted RBP4.73□□□□□ -1.65
EDEM3-203ENST00000439962 ZNF184Q99676 751 aaPredicted RBP4.73□□□□□ -1.65
EDEM3-203ENST00000439962 EDEM2Q9BV94 578 aa4.73□□□□□ -1.65
EDEM3-203ENST00000439962 C2orf49Q9BVC5 232 aaPredicted RBP4.73□□□□□ -1.65
EDEM3-203ENST00000439962 SLC13A1Q9BZW2 595 aa4.73□□□□□ -1.65
EDEM3-203ENST00000439962 BTBD1Q9H0C5 482 aa4.73□□□□□ -1.65
EDEM3-203ENST00000439962 ZNF385DQ9H6B1 395 aa4.73□□□□□ -1.65
EDEM3-203ENST00000439962 NMRAL1Q9HBL8 299 aa4.73□□□□□ -1.65
EDEM3-203ENST00000439962 DYRK4Q9NR20 520 aa4.73□□□□□ -1.65
EDEM3-203ENST00000439962 UBP1Q9NZI7 540 aa4.73□□□□□ -1.65
EDEM3-203ENST00000439962 C6orf203Q9P0P8 240 aaPredicted RBP4.73□□□□□ -1.65
EDEM3-203ENST00000439962 IPO11Q9UI26 975 aaKnown RBP4.73□□□□□ -1.65
EDEM3-203ENST00000439962 TLK1Q9UKI8 766 aa4.73□□□□□ -1.65
EDEM3-203ENST00000439962 CNOT11Q9UKZ1 510 aaKnown RBP4.73□□□□□ -1.65
EDEM3-203ENST00000439962 NEU3Q9UQ49 428 aa4.73□□□□□ -1.65
EDEM3-203ENST00000439962 DNAJC16Q9Y2G8 782 aa4.73□□□□□ -1.65
EDEM3-203ENST00000439962 DOCK4Q8N1I0 1966 aa4.73□□□□□ -1.65
EDEM3-203ENST00000439962 SHROOM3Q8TF72 1996 aa4.73□□□□□ -1.65
EDEM3-203ENST00000439962 HELZP42694 1942 aaKnown RBP4.73□□□□□ -1.65
EDEM3-203ENST00000439962 ATRXP46100 2492 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 A0A096LPK6 155 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 HEATR9A2RTY3 570 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 MATN2O00339 956 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 HDAC3O15379 428 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 AP1G1O43747 822 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 CAPNS1P04632 268 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 CTSLP07711 333 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 SRCP12931 536 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 PFKLP17858 780 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 PSMA3P25788 255 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 CD6P30203 668 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 CD68P34810 354 aaPredicted RBP4.72□□□□□ -1.65
EDEM3-203ENST00000439962 ADRA1AP35348 466 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 PAPOLAP51003 745 aaKnown RBP4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms