RNA–Protein interactions for RNA: ENST00000439936.6

COPS3-203, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5 BASIC

Gene COPS3, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-203ENST00000439936 PUM1Q14671 1186 aaKnown RBP eCLIP7.41□□□□□ -1.22
COPS3-203ENST00000439936 TAF1AQ15573 450 aaPredicted RBP7.41□□□□□ -1.22
COPS3-203ENST00000439936 ALG11Q2TAA5 492 aa7.41□□□□□ -1.22
COPS3-203ENST00000439936 PRRT3Q5FWE3 981 aa7.41□□□□□ -1.22
COPS3-203ENST00000439936 CERCAMQ5T4B2 595 aa7.41□□□□□ -1.22
COPS3-203ENST00000439936 KCTD16Q68DU8 428 aa7.41□□□□□ -1.22
COPS3-203ENST00000439936 ADAMTSL4Q6UY14 1074 aa7.41□□□□□ -1.22
COPS3-203ENST00000439936 MACC1Q6ZN28 852 aa7.41□□□□□ -1.22
COPS3-203ENST00000439936 RD3Q7Z3Z2 195 aa7.41□□□□□ -1.22
COPS3-203ENST00000439936 GLT6D1Q7Z4J2 308 aa7.41□□□□□ -1.22
COPS3-203ENST00000439936 PIP4P1Q86T03 277 aa7.41□□□□□ -1.22
COPS3-203ENST00000439936 PARGQ86W56 976 aa7.41□□□□□ -1.22
COPS3-203ENST00000439936 HEATR4Q86WZ0 1026 aa7.41□□□□□ -1.22
COPS3-203ENST00000439936 HID1Q8IV36 788 aa7.41□□□□□ -1.22
COPS3-203ENST00000439936 OR4K2Q8NGD2 314 aa7.41□□□□□ -1.22
COPS3-203ENST00000439936 OR56A4Q8NGH8 313 aa7.41□□□□□ -1.22
COPS3-203ENST00000439936 OR1E3Q8WZA6 343 aa7.41□□□□□ -1.22
COPS3-203ENST00000439936 ALKBH8Q96BT7 664 aaKnown RBP7.41□□□□□ -1.22
COPS3-203ENST00000439936 COX14Q96I36 57 aa7.41□□□□□ -1.22
COPS3-203ENST00000439936 HIC2Q96JB3 615 aa7.41□□□□□ -1.22
COPS3-203ENST00000439936 WDR92Q96MX6 357 aa7.41□□□□□ -1.22
COPS3-203ENST00000439936 KRTAP4-12Q9BQ66 201 aa7.41□□□□□ -1.22
COPS3-203ENST00000439936 SPATA16Q9BXB7 569 aa7.41□□□□□ -1.22
COPS3-203ENST00000439936 DDX47Q9H0S4 455 aaKnown RBP7.41□□□□□ -1.22
COPS3-203ENST00000439936 CDH19Q9H159 772 aa7.41□□□□□ -1.22
COPS3-203ENST00000439936 UGT1A7Q9HAW7 530 aa7.41□□□□□ -1.22
COPS3-203ENST00000439936 UGT1A10Q9HAW8 530 aa7.41□□□□□ -1.22
COPS3-203ENST00000439936 UGT1A8Q9HAW9 530 aa7.41□□□□□ -1.22
COPS3-203ENST00000439936 IL26Q9NPH9 171 aa7.41□□□□□ -1.22
COPS3-203ENST00000439936 MRPL40Q9NQ50 206 aaKnown RBP7.41□□□□□ -1.22
COPS3-203ENST00000439936 PHPT1Q9NRX4 125 aaPredicted RBP7.41□□□□□ -1.22
COPS3-203ENST00000439936 RAD18Q9NS91 495 aa7.41□□□□□ -1.22
COPS3-203ENST00000439936 UCKL1Q9NWZ5 548 aa7.41□□□□□ -1.22
COPS3-203ENST00000439936 PCYOX1Q9UHG3 505 aa7.41□□□□□ -1.22
COPS3-203ENST00000439936 MOSPD1Q9UJG1 213 aa7.41□□□□□ -1.22
COPS3-203ENST00000439936 TMPRSS11EQ9UL52 423 aa7.41□□□□□ -1.22
COPS3-203ENST00000439936 BTBD3Q9Y2F9 522 aa7.41□□□□□ -1.22
COPS3-203ENST00000439936 TMEM98Q9Y2Y6 226 aa7.41□□□□□ -1.22
COPS3-203ENST00000439936 ARL5AQ9Y689 179 aa7.41□□□□□ -1.22
COPS3-203ENST00000439936 LRP4O75096 1905 aa7.41□□□□□ -1.22
COPS3-203ENST00000439936 PLXNB3Q9ULL4 1909 aa7.41□□□□□ -1.22
COPS3-203ENST00000439936 GOLGA6L10A0A0M3HER8 536 aa7.4□□□□□ -1.22
COPS3-203ENST00000439936 GAPDHSO14556 408 aaPredicted RBP7.4□□□□□ -1.22
COPS3-203ENST00000439936 GIPC1O14908 333 aa7.4□□□□□ -1.22
COPS3-203ENST00000439936 SCAMP1O15126 338 aa7.4□□□□□ -1.22
COPS3-203ENST00000439936 YKT6O15498 198 aa7.4□□□□□ -1.22
COPS3-203ENST00000439936 LDB2O43679 373 aa7.4□□□□□ -1.22
COPS3-203ENST00000439936 CBFA2T3O75081 653 aa7.4□□□□□ -1.22
COPS3-203ENST00000439936 PPFIA2O75334 1257 aa7.4□□□□□ -1.22
COPS3-203ENST00000439936 RASGRP1O95267 797 aa7.4□□□□□ -1.22
COPS3-203ENST00000439936 CRTAMO95727 393 aa7.4□□□□□ -1.22
COPS3-203ENST00000439936 PYGLP06737 847 aa7.4□□□□□ -1.22
COPS3-203ENST00000439936 GIMD1P0DJR0 217 aa7.4□□□□□ -1.22
COPS3-203ENST00000439936 MYCLP1P12525 358 aaPredicted RBP7.4□□□□□ -1.22
COPS3-203ENST00000439936 NME1P15531 152 aaKnown RBP7.4□□□□□ -1.22
COPS3-203ENST00000439936 CSRP1P21291 193 aaKnown RBP7.4□□□□□ -1.22
COPS3-203ENST00000439936 ALAS2P22557 587 aa7.4□□□□□ -1.22
COPS3-203ENST00000439936 KELP23276 732 aa7.4□□□□□ -1.22
COPS3-203ENST00000439936 EPHA8P29322 1005 aaPredicted RBP7.4□□□□□ -1.22
COPS3-203ENST00000439936 CA5AP35218 305 aa7.4□□□□□ -1.22
COPS3-203ENST00000439936 NPY2RP49146 381 aa7.4□□□□□ -1.22
COPS3-203ENST00000439936 FNTAP49354 379 aa7.4□□□□□ -1.22
COPS3-203ENST00000439936 HK3P52790 923 aa7.4□□□□□ -1.22
COPS3-203ENST00000439936 TERF1P54274 439 aa7.4□□□□□ -1.22
COPS3-203ENST00000439936 DCDC1P59894 354 aa7.4□□□□□ -1.22
COPS3-203ENST00000439936 CDK3Q00526 305 aa7.4□□□□□ -1.22
COPS3-203ENST00000439936 CDK16Q00536 496 aa7.4□□□□□ -1.22
COPS3-203ENST00000439936 CDH17Q12864 832 aa7.4□□□□□ -1.22
COPS3-203ENST00000439936 GPS1Q13098 491 aa7.4□□□□□ -1.22
COPS3-203ENST00000439936 CHRNA6Q15825 494 aa7.4□□□□□ -1.22
COPS3-203ENST00000439936 ALS2CLQ60I27 953 aa7.4□□□□□ -1.22
COPS3-203ENST00000439936 PPP1R21Q6ZMI0 780 aa7.4□□□□□ -1.22
COPS3-203ENST00000439936 KLHL7Q8IXQ5 586 aa7.4□□□□□ -1.22
COPS3-203ENST00000439936 PHACTR4Q8IZ21 702 aa7.4□□□□□ -1.22
COPS3-203ENST00000439936 RBFAQ8N0V3 343 aa7.4□□□□□ -1.22
COPS3-203ENST00000439936 TRAM1L1Q8N609 369 aa7.4□□□□□ -1.22
COPS3-203ENST00000439936 EID2Q8N6I1 236 aa7.4□□□□□ -1.22
COPS3-203ENST00000439936 DNAAF3Q8N9W5 541 aa7.4□□□□□ -1.22
COPS3-203ENST00000439936 DEFB124Q8NES8 71 aa7.4□□□□□ -1.22
COPS3-203ENST00000439936 OR13C4Q8NGS5 318 aa7.4□□□□□ -1.22
COPS3-203ENST00000439936 ZNF398Q8TD17 642 aa7.4□□□□□ -1.22
COPS3-203ENST00000439936 DTX3LQ8TDB6 740 aa7.4□□□□□ -1.22
COPS3-203ENST00000439936 LMX1AQ8TE12 382 aa7.4□□□□□ -1.22
COPS3-203ENST00000439936 GRK7Q8WTQ7 553 aa7.4□□□□□ -1.22
COPS3-203ENST00000439936 SETD7Q8WTS6 366 aaKnown RBP7.4□□□□□ -1.22
COPS3-203ENST00000439936 BTN2A2Q8WVV5 523 aa7.4□□□□□ -1.22
COPS3-203ENST00000439936 C16orf45Q96MC5 204 aaPredicted RBP7.4□□□□□ -1.22
COPS3-203ENST00000439936 PLEKHG4BQ96PX9 1271 aa7.4□□□□□ -1.22
COPS3-203ENST00000439936 FRMD8Q9BZ67 464 aaPredicted RBP7.4□□□□□ -1.22
COPS3-203ENST00000439936 SLC13A1Q9BZW2 595 aa7.4□□□□□ -1.22
COPS3-203ENST00000439936 CLPBQ9H078 707 aa7.4□□□□□ -1.22
COPS3-203ENST00000439936 WDR26Q9H7D7 661 aa7.4□□□□□ -1.22
COPS3-203ENST00000439936 CYP4F12Q9HCS2 524 aa7.4□□□□□ -1.22
COPS3-203ENST00000439936 FGF22Q9HCT0 170 aa7.4□□□□□ -1.22
COPS3-203ENST00000439936 ARFGAP3Q9NP61 516 aa7.4□□□□□ -1.22
COPS3-203ENST00000439936 CASS4Q9NQ75 786 aa7.4□□□□□ -1.22
COPS3-203ENST00000439936 DNAJB12Q9NXW2 375 aaKnown RBP7.4□□□□□ -1.22
COPS3-203ENST00000439936 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.4□□□□□ -1.222e-6■□□□□ 11.3
COPS3-203ENST00000439936 NFKBIL1Q9UBC1 381 aaPredicted RBP7.4□□□□□ -1.22
COPS3-203ENST00000439936 KLQ9UEF7 1012 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms