RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 GABBR2O75899 941 aa11.47□□□□□ -0.57
TRAPPC9-202ENST00000438773 CPSF4O95639 269 aaKnown RBP11.47□□□□□ -0.57
TRAPPC9-202ENST00000438773 GSSP48637 474 aa11.47□□□□□ -0.57
TRAPPC9-202ENST00000438773 LY6G5CQ5SRR4 150 aa11.47□□□□□ -0.57
TRAPPC9-202ENST00000438773 FAM46CQ5VWP2 391 aa11.47□□□□□ -0.57
TRAPPC9-202ENST00000438773 MBLAC2Q68D91 279 aa11.47□□□□□ -0.57
TRAPPC9-202ENST00000438773 UBE2R2Q712K3 238 aaPredicted RBP11.47□□□□□ -0.57
TRAPPC9-202ENST00000438773 TOX2Q96NM4 488 aa11.47□□□□□ -0.57
TRAPPC9-202ENST00000438773 EBF3Q9H4W6 596 aa11.47□□□□□ -0.57
TRAPPC9-202ENST00000438773 DOCK3Q8IZD9 2030 aa11.47□□□□□ -0.57
TRAPPC9-202ENST00000438773 ANKRD33BA6NCL7 494 aa11.47□□□□□ -0.57
TRAPPC9-202ENST00000438773 OR2AG2A6NM03 316 aa11.47□□□□□ -0.57
TRAPPC9-202ENST00000438773 ZNF23P17027 643 aa11.47□□□□□ -0.57
TRAPPC9-202ENST00000438773 GLDCP23378 1020 aa11.47□□□□□ -0.57
TRAPPC9-202ENST00000438773 GALK1P51570 392 aa11.47□□□□□ -0.57
TRAPPC9-202ENST00000438773 PGGT1BP53609 377 aa11.47□□□□□ -0.57
TRAPPC9-202ENST00000438773 CILP2Q8IUL8 1156 aa11.47□□□□□ -0.57
TRAPPC9-202ENST00000438773 ULK2Q8IYT8 1036 aa11.47□□□□□ -0.57
TRAPPC9-202ENST00000438773 SCML4Q8N228 414 aa11.47□□□□□ -0.57
TRAPPC9-202ENST00000438773 LENG8Q96PV6 779 aaPredicted RBP11.47□□□□□ -0.57
TRAPPC9-202ENST00000438773 FEM1AQ9BSK4 669 aa11.47□□□□□ -0.57
TRAPPC9-202ENST00000438773 OXSMQ9NWU1 459 aa11.47□□□□□ -0.57
TRAPPC9-202ENST00000438773 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.46□□□□□ -0.57
TRAPPC9-202ENST00000438773 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.46□□□□□ -0.57
TRAPPC9-202ENST00000438773 TIMP1P01033 207 aa11.46□□□□□ -0.57
TRAPPC9-202ENST00000438773 GKP32189 559 aa11.46□□□□□ -0.57
TRAPPC9-202ENST00000438773 GMPRP36959 345 aa11.46□□□□□ -0.57
TRAPPC9-202ENST00000438773 IDH3AP50213 366 aa11.46□□□□□ -0.57
TRAPPC9-202ENST00000438773 NAA20P61599 178 aa11.46□□□□□ -0.57
TRAPPC9-202ENST00000438773 FAM189BP81408 668 aa11.46□□□□□ -0.57
TRAPPC9-202ENST00000438773 CLCQ05315 142 aa11.46□□□□□ -0.57
TRAPPC9-202ENST00000438773 CYP51A1Q16850 503 aa11.46□□□□□ -0.57
TRAPPC9-202ENST00000438773 PLEKHG6Q3KR16 790 aa11.46□□□□□ -0.57
TRAPPC9-202ENST00000438773 CYS1Q717R9 158 aa11.46□□□□□ -0.57
TRAPPC9-202ENST00000438773 HPS6Q86YV9 775 aa11.46□□□□□ -0.57
TRAPPC9-202ENST00000438773 SLC39A11Q8N1S5 342 aa11.46□□□□□ -0.57
TRAPPC9-202ENST00000438773 OR6Y1Q8NGX8 325 aa11.46□□□□□ -0.57
TRAPPC9-202ENST00000438773 ASZ1Q8WWH4 475 aa11.46□□□□□ -0.57
TRAPPC9-202ENST00000438773 TOP1MTQ969P6 601 aa11.46□□□□□ -0.57
TRAPPC9-202ENST00000438773 TIFAQ96CG3 184 aa11.46□□□□□ -0.57
TRAPPC9-202ENST00000438773 HBEGFQ99075 208 aa11.46□□□□□ -0.57
TRAPPC9-202ENST00000438773 MYOCQ99972 504 aa11.46□□□□□ -0.57
TRAPPC9-202ENST00000438773 DHRS4Q9BTZ2 278 aa11.46□□□□□ -0.57
TRAPPC9-202ENST00000438773 DNAJC28Q9NX36 388 aa11.46□□□□□ -0.57
TRAPPC9-202ENST00000438773 KIF17Q9P2E2 1029 aa11.46□□□□□ -0.57
TRAPPC9-202ENST00000438773 C5orf58C9J3I9 102 aa11.46□□□□□ -0.57
TRAPPC9-202ENST00000438773 DLX3O60479 287 aa11.46□□□□□ -0.57
TRAPPC9-202ENST00000438773 RFPL2O75678 378 aa11.46□□□□□ -0.57
TRAPPC9-202ENST00000438773 WDR47O94967 919 aa11.46□□□□□ -0.57
TRAPPC9-202ENST00000438773 PRNPP04156 253 aa11.46□□□□□ -0.57
TRAPPC9-202ENST00000438773 TYRP14679 529 aa11.46□□□□□ -0.57
TRAPPC9-202ENST00000438773 EN2P19622 333 aaPredicted RBP11.46□□□□□ -0.57
TRAPPC9-202ENST00000438773 HSPA7P48741 367 aa11.46□□□□□ -0.57
TRAPPC9-202ENST00000438773 PSME3P61289 254 aa11.46□□□□□ -0.57
TRAPPC9-202ENST00000438773 TCEA2Q15560 299 aa11.46□□□□□ -0.57
TRAPPC9-202ENST00000438773 AAK1Q2M2I8 961 aa11.46□□□□□ -0.57
TRAPPC9-202ENST00000438773 LSM12Q3MHD2 195 aaKnown RBP11.46□□□□□ -0.57
TRAPPC9-202ENST00000438773 CARD16Q5EG05 197 aa11.46□□□□□ -0.57
TRAPPC9-202ENST00000438773 RBM44Q6ZP01 1051 aaKnown RBP11.46□□□□□ -0.57
TRAPPC9-202ENST00000438773 TMEM173Q86WV6 379 aaPredicted RBP11.46□□□□□ -0.57
TRAPPC9-202ENST00000438773 DHFR2Q86XF0 187 aa11.46□□□□□ -0.57
TRAPPC9-202ENST00000438773 LEMD2Q8NC56 503 aa11.46□□□□□ -0.57
TRAPPC9-202ENST00000438773 CYB5D2Q8WUJ1 264 aa11.46□□□□□ -0.57
TRAPPC9-202ENST00000438773 ATL1Q8WXF7 558 aa11.46□□□□□ -0.57
TRAPPC9-202ENST00000438773 NT5C3BQ969T7 300 aa11.46□□□□□ -0.57
TRAPPC9-202ENST00000438773 FAM120BQ96EK7 910 aaKnown RBP11.46□□□□□ -0.57
TRAPPC9-202ENST00000438773 C19orf60Q96EN9 201 aa11.46□□□□□ -0.57
TRAPPC9-202ENST00000438773 SH3GL1Q99961 368 aa11.46□□□□□ -0.57
TRAPPC9-202ENST00000438773 GORASP1Q9BQQ3 440 aa11.46□□□□□ -0.57
TRAPPC9-202ENST00000438773 CLSTN3Q9BQT9 956 aa11.46□□□□□ -0.57
TRAPPC9-202ENST00000438773 TMEM30AQ9NV96 361 aa11.46□□□□□ -0.57
TRAPPC9-202ENST00000438773 RPL26L1Q9UNX3 145 aaKnown RBP11.46□□□□□ -0.57
TRAPPC9-202ENST00000438773 MYO1GB0I1T2 1018 aa11.46□□□□□ -0.58
TRAPPC9-202ENST00000438773 KLF11O14901 512 aa11.46□□□□□ -0.58
TRAPPC9-202ENST00000438773 TGM5O43548 720 aa11.46□□□□□ -0.58
TRAPPC9-202ENST00000438773 PAPSS2O95340 614 aaPredicted RBP11.46□□□□□ -0.58
TRAPPC9-202ENST00000438773 SIX3O95343 332 aaPredicted RBP11.46□□□□□ -0.58
TRAPPC9-202ENST00000438773 ADARP55265 1226 aaKnown RBP11.46□□□□□ -0.58
TRAPPC9-202ENST00000438773 RPL38P63173 70 aaKnown RBP11.46□□□□□ -0.58
TRAPPC9-202ENST00000438773 CHRNB3Q05901 458 aa11.46□□□□□ -0.58
TRAPPC9-202ENST00000438773 CDC16Q13042 620 aa11.46□□□□□ -0.58
TRAPPC9-202ENST00000438773 KRT72Q14CN4 511 aa11.46□□□□□ -0.58
TRAPPC9-202ENST00000438773 STEAP4Q687X5 459 aa11.46□□□□□ -0.58
TRAPPC9-202ENST00000438773 SLC8B1Q6J4K2 584 aa11.46□□□□□ -0.58
TRAPPC9-202ENST00000438773 CRTC3Q6UUV7 619 aa11.46□□□□□ -0.58
TRAPPC9-202ENST00000438773 ARHGAP12Q8IWW6 846 aa11.46□□□□□ -0.58
TRAPPC9-202ENST00000438773 ZBTB2Q8N680 514 aa11.46□□□□□ -0.58
TRAPPC9-202ENST00000438773 CLDN19Q8N6F1 224 aa11.46□□□□□ -0.58
TRAPPC9-202ENST00000438773 CEP19Q96LK0 163 aa11.46□□□□□ -0.58
TRAPPC9-202ENST00000438773 KCTD14Q9BQ13 255 aaPredicted RBP11.46□□□□□ -0.58
TRAPPC9-202ENST00000438773 CLDN7O95471 211 aa11.46□□□□□ -0.58
TRAPPC9-202ENST00000438773 IFNA8P32881 189 aa11.46□□□□□ -0.58
TRAPPC9-202ENST00000438773 LCP2Q13094 533 aa11.46□□□□□ -0.58
TRAPPC9-202ENST00000438773 PRKG2Q13237 762 aa11.46□□□□□ -0.58
TRAPPC9-202ENST00000438773 CNPY1Q3B7I2 92 aa11.46□□□□□ -0.58
TRAPPC9-202ENST00000438773 ZDHHC20Q5W0Z9 365 aa11.46□□□□□ -0.58
TRAPPC9-202ENST00000438773 RANBP10Q6VN20 620 aa11.46□□□□□ -0.58
TRAPPC9-202ENST00000438773 NAPRTQ6XQN6 538 aa11.46□□□□□ -0.58
TRAPPC9-202ENST00000438773 RAVER1Q8IY67 606 aaKnown RBP11.46□□□□□ -0.58
TRAPPC9-202ENST00000438773 SNX6Q9UNH7 406 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms