RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 MAML1Q92585 1016 aa7.68□□□□□ -1.18
VPS50-204ENST00000438395 FATE1Q969F0 183 aa7.68□□□□□ -1.18
VPS50-204ENST00000438395 TSGA13Q96PP4 275 aa7.68□□□□□ -1.18
VPS50-204ENST00000438395 FUCA2Q9BTY2 467 aa7.68□□□□□ -1.18
VPS50-204ENST00000438395 MLPHQ9BV36 600 aaPredicted RBP7.68□□□□□ -1.18
VPS50-204ENST00000438395 MAK16Q9BXY0 300 aaKnown RBP7.68□□□□□ -1.18
VPS50-204ENST00000438395 SLC25A18Q9H1K4 315 aa7.68□□□□□ -1.18
VPS50-204ENST00000438395 TRIT1Q9H3H1 467 aaKnown RBP7.68□□□□□ -1.18
VPS50-204ENST00000438395 ZNHIT6Q9NWK9 470 aaKnown RBP7.68□□□□□ -1.18
VPS50-204ENST00000438395 UVRAGQ9P2Y5 699 aa7.68□□□□□ -1.18
VPS50-204ENST00000438395 KLHL3Q9UH77 587 aa7.68□□□□□ -1.18
VPS50-204ENST00000438395 IL17BQ9UHF5 180 aa7.68□□□□□ -1.18
VPS50-204ENST00000438395 PPIL1Q9Y3C6 166 aa7.68□□□□□ -1.18
VPS50-204ENST00000438395 PLEKHM1Q9Y4G2 1056 aa7.68□□□□□ -1.18
VPS50-204ENST00000438395 HEY1Q9Y5J3 304 aa7.68□□□□□ -1.18
VPS50-204ENST00000438395 UBR5O95071 2799 aaPredicted RBP7.67□□□□□ -1.18
VPS50-204ENST00000438395 A0A087X0T9 212 aa7.67□□□□□ -1.18
VPS50-204ENST00000438395 A6NJY4 79 aa7.67□□□□□ -1.18
VPS50-204ENST00000438395 GPR89AB7ZAQ6 455 aa7.67□□□□□ -1.18
VPS50-204ENST00000438395 KCNK1O00180 336 aa7.67□□□□□ -1.18
VPS50-204ENST00000438395 PPP1R12AO14974 1030 aaPredicted RBP7.67□□□□□ -1.18
VPS50-204ENST00000438395 POLR1CO15160 346 aaPredicted RBP7.67□□□□□ -1.18
VPS50-204ENST00000438395 GRID2O43424 1007 aa7.67□□□□□ -1.18
VPS50-204ENST00000438395 FZD6O60353 706 aa7.67□□□□□ -1.18
VPS50-204ENST00000438395 RASSF9O75901 435 aa7.67□□□□□ -1.18
VPS50-204ENST00000438395 SLC25A14O95258 325 aaPredicted RBP7.67□□□□□ -1.18
VPS50-204ENST00000438395 SOD1P00441 154 aa7.67□□□□□ -1.18
VPS50-204ENST00000438395 VIPP01282 170 aa7.67□□□□□ -1.18
VPS50-204ENST00000438395 JCHAINP01591 159 aa7.67□□□□□ -1.18
VPS50-204ENST00000438395 HLA-DQB2P05538 268 aa7.67□□□□□ -1.18
VPS50-204ENST00000438395 CD48P09326 243 aa7.67□□□□□ -1.18
VPS50-204ENST00000438395 H2AFZP0C0S5 128 aa7.67□□□□□ -1.18
VPS50-204ENST00000438395 FAM228BP0C875 321 aa7.67□□□□□ -1.18
VPS50-204ENST00000438395 GPR89BP0CG08 455 aa7.67□□□□□ -1.18
VPS50-204ENST00000438395 F3P13726 295 aa7.67□□□□□ -1.18
VPS50-204ENST00000438395 WT1P19544 449 aaPredicted RBP7.67□□□□□ -1.18
VPS50-204ENST00000438395 SPINT3P49223 89 aa7.67□□□□□ -1.18
VPS50-204ENST00000438395 GBE1Q04446 702 aa7.67□□□□□ -1.18
VPS50-204ENST00000438395 FOXM1Q08050 763 aa7.67□□□□□ -1.18
VPS50-204ENST00000438395 AP1B1Q10567 949 aa7.67□□□□□ -1.18
VPS50-204ENST00000438395 GTF2H3Q13889 308 aa7.67□□□□□ -1.18
VPS50-204ENST00000438395 TBCELQ5QJ74 424 aa7.67□□□□□ -1.18
VPS50-204ENST00000438395 ALS2CLQ60I27 953 aa7.67□□□□□ -1.18
VPS50-204ENST00000438395 HGSNATQ68CP4 663 aa7.67□□□□□ -1.18
VPS50-204ENST00000438395 CRTC3Q6UUV7 619 aa7.67□□□□□ -1.18
VPS50-204ENST00000438395 H2AFVQ71UI9 128 aa7.67□□□□□ -1.18
VPS50-204ENST00000438395 ESX1Q8N693 406 aa7.67□□□□□ -1.18
VPS50-204ENST00000438395 C9orf43Q8TAL5 461 aaPredicted RBP7.67□□□□□ -1.18
VPS50-204ENST00000438395 GDAP1Q8TB36 358 aa7.67□□□□□ -1.18
VPS50-204ENST00000438395 HTR3CQ8WXA8 447 aa7.67□□□□□ -1.18
VPS50-204ENST00000438395 PMEPA1Q969W9 287 aa7.67□□□□□ -1.18
VPS50-204ENST00000438395 COL26A1Q96A83 441 aa7.67□□□□□ -1.18
VPS50-204ENST00000438395 COX14Q96I36 57 aa7.67□□□□□ -1.18
VPS50-204ENST00000438395 SLC45A3Q96JT2 553 aa7.67□□□□□ -1.18
VPS50-204ENST00000438395 TTC25Q96NG3 672 aa7.67□□□□□ -1.18
VPS50-204ENST00000438395 SMIM14Q96QK8 99 aa7.67□□□□□ -1.18
VPS50-204ENST00000438395 LYSMD1Q96S90 227 aa7.67□□□□□ -1.18
VPS50-204ENST00000438395 SRPK1Q96SB4 655 aaKnown RBP7.67□□□□□ -1.18
VPS50-204ENST00000438395 AGAP2Q99490 1192 aa7.67□□□□□ -1.18
VPS50-204ENST00000438395 CTRCQ99895 268 aa7.67□□□□□ -1.18
VPS50-204ENST00000438395 ZSCAN5AQ9BUG6 496 aa7.67□□□□□ -1.18
VPS50-204ENST00000438395 GPR63Q9BZJ6 419 aa7.67□□□□□ -1.18
VPS50-204ENST00000438395 OR2AG1Q9H205 316 aa7.67□□□□□ -1.18
VPS50-204ENST00000438395 CARD9Q9H257 536 aa7.67□□□□□ -1.18
VPS50-204ENST00000438395 ZFYVE1Q9HBF4 777 aa7.67□□□□□ -1.18
VPS50-204ENST00000438395 OCIAD1Q9NX40 245 aa7.67□□□□□ -1.18
VPS50-204ENST00000438395 TMEM9Q9P0T7 183 aa7.67□□□□□ -1.18
VPS50-204ENST00000438395 CPNE7Q9UBL6 633 aa7.67□□□□□ -1.18
VPS50-204ENST00000438395 TBC1D29Q9UFV1 150 aa7.67□□□□□ -1.18
VPS50-204ENST00000438395 TUBD1Q9UJT1 453 aa7.67□□□□□ -1.18
VPS50-204ENST00000438395 CAPN11Q9UMQ6 739 aa7.67□□□□□ -1.18
VPS50-204ENST00000438395 ST14Q9Y5Y6 855 aa7.67□□□□□ -1.18
VPS50-204ENST00000438395 FLNCQ14315 2725 aa7.67□□□□□ -1.18
VPS50-204ENST00000438395 COL27A1Q8IZC6 1860 aaPredicted RBP7.66□□□□□ -1.18
VPS50-204ENST00000438395 ANKRD36A6QL64 1941 aa7.66□□□□□ -1.18
VPS50-204ENST00000438395 LRP4O75096 1905 aa7.66□□□□□ -1.18
VPS50-204ENST00000438395 LILRA5A6NI73 299 aa7.66□□□□□ -1.18
VPS50-204ENST00000438395 ANKRD66B4E2M5 251 aa7.66□□□□□ -1.18
VPS50-204ENST00000438395 SHISA8B8ZZ34 492 aa7.66□□□□□ -1.18
VPS50-204ENST00000438395 APOL1O14791 398 aa7.66□□□□□ -1.18
VPS50-204ENST00000438395 DNAJC6O75061 913 aa7.66□□□□□ -1.18
VPS50-204ENST00000438395 STK17BO94768 372 aa7.66□□□□□ -1.18
VPS50-204ENST00000438395 KRT1P04264 644 aa7.66□□□□□ -1.18
VPS50-204ENST00000438395 ZFXP17010 805 aaPredicted RBP7.66□□□□□ -1.18
VPS50-204ENST00000438395 AMD1P17707 334 aa7.66□□□□□ -1.18
VPS50-204ENST00000438395 HALP42357 657 aa7.66□□□□□ -1.18
VPS50-204ENST00000438395 DCDC1P59894 354 aa7.66□□□□□ -1.18
VPS50-204ENST00000438395 MC2RQ01718 297 aa7.66□□□□□ -1.18
VPS50-204ENST00000438395 TLE1Q04724 770 aa7.66□□□□□ -1.18
VPS50-204ENST00000438395 NIPAL4Q0D2K0 466 aa7.66□□□□□ -1.18
VPS50-204ENST00000438395 GALNT3Q14435 633 aa7.66□□□□□ -1.18
VPS50-204ENST00000438395 NR1I3Q14994 352 aa7.66□□□□□ -1.18
VPS50-204ENST00000438395 CLCA4Q14CN2 919 aa7.66□□□□□ -1.18
VPS50-204ENST00000438395 PDK1Q15118 436 aa7.66□□□□□ -1.18
VPS50-204ENST00000438395 PCSK7Q16549 785 aa7.66□□□□□ -1.18
VPS50-204ENST00000438395 PLA2G4EQ3MJ16 856 aa7.66□□□□□ -1.18
VPS50-204ENST00000438395 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.66□□□□□ -1.18
VPS50-204ENST00000438395 HENMT1Q5T8I9 393 aaKnown RBP7.66□□□□□ -1.18
VPS50-204ENST00000438395 PDPK2PQ6A1A2 396 aa7.66□□□□□ -1.18
VPS50-204ENST00000438395 CYB5D1Q6P9G0 228 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms