RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 LRATO95237 230 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 HSPA7P48741 367 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 GPR15P49685 360 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 ATP4BP51164 291 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 CCR3P51677 355 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 EPHB3P54753 998 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 MS4A2Q01362 244 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 C1DQ13901 141 aaKnown RBP6.63□□□□□ -1.35
CSDE1-205ENST00000438362 TRIP4Q15650 581 aaPredicted RBP6.63□□□□□ -1.35
CSDE1-205ENST00000438362 PAGE2BQ5JRK9 111 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 ZNF467Q7Z7K2 595 aaPredicted RBP6.63□□□□□ -1.35
CSDE1-205ENST00000438362 CEP97Q8IW35 865 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 PARP8Q8N3A8 854 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 RAB42Q8N4Z0 105 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 POC5Q8NA72 575 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 KDM1BQ8NB78 822 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 DRAXINQ8NBI3 349 aaPredicted RBP6.63□□□□□ -1.35
CSDE1-205ENST00000438362 KBTBD7Q8WVZ9 684 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 NELL1Q92832 810 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 C12orf43Q96C57 262 aaKnown RBP6.63□□□□□ -1.35
CSDE1-205ENST00000438362 CDKN2AIPNLQ96HQ2 116 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 ZBED2Q9BTP6 218 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 MAGEH1Q9H213 219 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 TRNAU1APQ9NX07 287 aaKnown RBP6.63□□□□□ -1.35
CSDE1-205ENST00000438362 MTMR10Q9NXD2 777 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 SLC25A13Q9UJS0 675 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 IKZF3Q9UKT9 509 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 ZNF490Q9ULM2 529 aaPredicted RBP6.63□□□□□ -1.35
CSDE1-205ENST00000438362 SAMD4AQ9UPU9 718 aaKnown RBP6.63□□□□□ -1.35
CSDE1-205ENST00000438362 MANSC4A6NHS7 340 aaPredicted RBP6.62□□□□□ -1.35
CSDE1-205ENST00000438362 H0YJX3 145 aa6.62□□□□□ -1.35
CSDE1-205ENST00000438362 J3KR12 359 aa6.62□□□□□ -1.35
CSDE1-205ENST00000438362 INSIG1O15503 277 aa6.62□□□□□ -1.35
CSDE1-205ENST00000438362 GRID2O43424 1007 aa6.62□□□□□ -1.35
CSDE1-205ENST00000438362 UGT2B11O75310 529 aa6.62□□□□□ -1.35
CSDE1-205ENST00000438362 PAPSS2O95340 614 aaPredicted RBP6.62□□□□□ -1.35
CSDE1-205ENST00000438362 ALOX5P09917 674 aa6.62□□□□□ -1.35
CSDE1-205ENST00000438362 CCDC159P0C7I6 412 aa6.62□□□□□ -1.35
CSDE1-205ENST00000438362 DBTP11182 482 aaKnown RBP6.62□□□□□ -1.35
CSDE1-205ENST00000438362 ZNF37AP17032 561 aaPredicted RBP6.62□□□□□ -1.35
CSDE1-205ENST00000438362 IGFBP5P24593 272 aa6.62□□□□□ -1.35
CSDE1-205ENST00000438362 GRK4P32298 578 aa6.62□□□□□ -1.35
CSDE1-205ENST00000438362 CPOXP36551 454 aa6.62□□□□□ -1.35
CSDE1-205ENST00000438362 MAPK8P45983 427 aa6.62□□□□□ -1.35
CSDE1-205ENST00000438362 YAP1P46937 504 aaKnown RBP6.62□□□□□ -1.35
CSDE1-205ENST00000438362 PFKPQ01813 784 aa6.62□□□□□ -1.35
CSDE1-205ENST00000438362 UBE3AQ05086 875 aa6.62□□□□□ -1.35
CSDE1-205ENST00000438362 SIRPB2Q5JXA9 342 aa6.62□□□□□ -1.35
CSDE1-205ENST00000438362 ZNF678Q5SXM1 525 aa6.62□□□□□ -1.35
CSDE1-205ENST00000438362 PGM2L1Q6PCE3 622 aa6.62□□□□□ -1.35
CSDE1-205ENST00000438362 NPWQ8N729 165 aa6.62□□□□□ -1.35
CSDE1-205ENST00000438362 SLC13A3Q8WWT9 602 aa6.62□□□□□ -1.35
CSDE1-205ENST00000438362 HSPBAP1Q96EW2 488 aa6.62□□□□□ -1.35
CSDE1-205ENST00000438362 CAMKK2Q96RR4 588 aa6.62□□□□□ -1.35
CSDE1-205ENST00000438362 RERGLQ9H628 205 aa6.62□□□□□ -1.35
CSDE1-205ENST00000438362 MIEF1Q9NQG6 463 aa6.62□□□□□ -1.35
CSDE1-205ENST00000438362 GIMAP2Q9UG22 337 aa6.62□□□□□ -1.35
CSDE1-205ENST00000438362 FKBPLQ9UIM3 349 aa6.62□□□□□ -1.35
CSDE1-205ENST00000438362 TLR6Q9Y2C9 796 aa6.62□□□□□ -1.35
CSDE1-205ENST00000438362 TDRKHQ9Y2W6 561 aaKnown RBP6.62□□□□□ -1.35
CSDE1-205ENST00000438362 COQ6Q9Y2Z9 468 aa6.62□□□□□ -1.35
CSDE1-205ENST00000438362 HS3ST4Q9Y661 456 aa6.62□□□□□ -1.35
CSDE1-205ENST00000438362 C9IYK1 514 aa6.62□□□□□ -1.35
CSDE1-205ENST00000438362 ECI2O75521 394 aa6.62□□□□□ -1.35
CSDE1-205ENST00000438362 STK16O75716 305 aa6.62□□□□□ -1.35
CSDE1-205ENST00000438362 SLC25A14O95258 325 aaPredicted RBP6.62□□□□□ -1.35
CSDE1-205ENST00000438362 ESR1P03372 595 aa6.62□□□□□ -1.35
CSDE1-205ENST00000438362 CDH1P12830 882 aa6.62□□□□□ -1.35
CSDE1-205ENST00000438362 PRKAR2AP13861 404 aaKnown RBP6.62□□□□□ -1.35
CSDE1-205ENST00000438362 HPCAL1P37235 193 aa6.62□□□□□ -1.35
CSDE1-205ENST00000438362 GJA9P57773 515 aa6.62□□□□□ -1.35
CSDE1-205ENST00000438362 SOX4Q06945 474 aaPredicted RBP6.62□□□□□ -1.35
CSDE1-205ENST00000438362 SREBF2Q12772 1141 aa6.62□□□□□ -1.35
CSDE1-205ENST00000438362 BNIP3Q12983 259 aa6.62□□□□□ -1.35
CSDE1-205ENST00000438362 MRPL28Q13084 256 aaKnown RBP6.62□□□□□ -1.35
CSDE1-205ENST00000438362 PLD1Q13393 1074 aa6.62□□□□□ -1.35
CSDE1-205ENST00000438362 GTF2H2Q13888 395 aa6.62□□□□□ -1.35
CSDE1-205ENST00000438362 CCDC142Q17RM4 750 aa6.62□□□□□ -1.35
CSDE1-205ENST00000438362 RABL3Q5HYI8 236 aa6.62□□□□□ -1.35
CSDE1-205ENST00000438362 LYPLAL1Q5VWZ2 237 aa6.62□□□□□ -1.35
CSDE1-205ENST00000438362 GTF2H2CQ6P1K8 395 aa6.62□□□□□ -1.35
CSDE1-205ENST00000438362 TRAF7Q6Q0C0 670 aa6.62□□□□□ -1.35
CSDE1-205ENST00000438362 ZNF534Q76KX8 674 aa6.62□□□□□ -1.35
CSDE1-205ENST00000438362 GALNT5Q7Z7M9 940 aa6.62□□□□□ -1.35
CSDE1-205ENST00000438362 ANKRD23Q86SG2 305 aa6.62□□□□□ -1.35
CSDE1-205ENST00000438362 SAPCD2Q86UD0 394 aa6.62□□□□□ -1.35
CSDE1-205ENST00000438362 CYP4Z1Q86W10 505 aa6.62□□□□□ -1.35
CSDE1-205ENST00000438362 HEATR4Q86WZ0 1026 aa6.62□□□□□ -1.35
CSDE1-205ENST00000438362 SVOPLQ8N434 492 aa6.62□□□□□ -1.35
CSDE1-205ENST00000438362 MCFD2Q8NI22 146 aa6.62□□□□□ -1.35
CSDE1-205ENST00000438362 GANCQ8TET4 914 aa6.62□□□□□ -1.35
CSDE1-205ENST00000438362 MYDGFQ969H8 173 aa6.62□□□□□ -1.35
CSDE1-205ENST00000438362 SLC45A3Q96JT2 553 aa6.62□□□□□ -1.35
CSDE1-205ENST00000438362 SMOC2Q9H3U7 446 aa6.62□□□□□ -1.35
CSDE1-205ENST00000438362 STARD7Q9NQZ5 370 aa6.62□□□□□ -1.35
CSDE1-205ENST00000438362 DNAAF2Q9NVR5 837 aaKnown RBP6.62□□□□□ -1.35
CSDE1-205ENST00000438362 GALPQ9UBC7 116 aa6.62□□□□□ -1.35
CSDE1-205ENST00000438362 DNAJB9Q9UBS3 223 aa6.62□□□□□ -1.35
CSDE1-205ENST00000438362 CNOT11Q9UKZ1 510 aaKnown RBP6.62□□□□□ -1.35
CSDE1-205ENST00000438362 NHSL1Q5SYE7 1610 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms