RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 E5RI56 91 aa22.74■■□□□ 1.23
CPSF4-204ENST00000436336 AXIN1O15169 862 aa22.74■■□□□ 1.23
CPSF4-204ENST00000436336 RAD51BO15315 384 aa22.74■■□□□ 1.23
CPSF4-204ENST00000436336 PRPF4O43172 522 aaKnown RBP eCLIP22.74■■□□□ 1.23
CPSF4-204ENST00000436336 TYROBPO43914 113 aa22.74■■□□□ 1.23
CPSF4-204ENST00000436336 NIPSNAP2O75323 286 aa22.74■■□□□ 1.23
CPSF4-204ENST00000436336 MTX2O75431 263 aa22.74■■□□□ 1.23
CPSF4-204ENST00000436336 AP2A2O94973 939 aa22.74■■□□□ 1.23
CPSF4-204ENST00000436336 OR56A5P0C7T3 313 aa22.74■■□□□ 1.23
CPSF4-204ENST00000436336 SLC35E2BP0CK96 405 aa22.74■■□□□ 1.23
CPSF4-204ENST00000436336 IGFALSP35858 605 aa22.74■■□□□ 1.23
CPSF4-204ENST00000436336 CDK3Q00526 305 aa22.74■■□□□ 1.23
CPSF4-204ENST00000436336 TIAL1Q01085 375 aaKnown RBP eCLIP22.74■■□□□ 1.23
CPSF4-204ENST00000436336 TMEM115Q12893 351 aaPredicted RBP22.74■■□□□ 1.23
CPSF4-204ENST00000436336 INPP5AQ14642 412 aa22.74■■□□□ 1.23
CPSF4-204ENST00000436336 KHDC1Q4VXA5 237 aaKnown RBP22.74■■□□□ 1.23
CPSF4-204ENST00000436336 PPM1JQ5JR12 505 aa22.74■■□□□ 1.23
CPSF4-204ENST00000436336 TRIM39Q9HCM9 518 aa22.74■■□□□ 1.23
CPSF4-204ENST00000436336 OGFRQ9NZT2 677 aa22.74■■□□□ 1.23
CPSF4-204ENST00000436336 ANKRD6Q9Y2G4 727 aa22.74■■□□□ 1.23
CPSF4-204ENST00000436336 VCANP13611 3396 aa22.73■■□□□ 1.23
CPSF4-204ENST00000436336 F8W8V4 182 aa22.73■■□□□ 1.23
CPSF4-204ENST00000436336 QSOX1O00391 747 aa22.73■■□□□ 1.23
CPSF4-204ENST00000436336 COPEO14579 308 aa22.73■■□□□ 1.23
CPSF4-204ENST00000436336 SPAG7O75391 227 aa22.73■■□□□ 1.23
CPSF4-204ENST00000436336 CHRM3P20309 590 aa22.73■■□□□ 1.23
CPSF4-204ENST00000436336 HNRNPA2B1P22626 353 aaKnown RBP22.73■■□□□ 1.23
CPSF4-204ENST00000436336 HOXA6P31267 233 aa22.73■■□□□ 1.23
CPSF4-204ENST00000436336 ZNF460Q14592 562 aa22.73■■□□□ 1.23
CPSF4-204ENST00000436336 UGT3A1Q6NUS8 523 aa22.73■■□□□ 1.23
CPSF4-204ENST00000436336 ARFGAP2Q8N6H7 521 aa22.73■■□□□ 1.23
CPSF4-204ENST00000436336 FRMD1Q8N878 549 aa22.73■■□□□ 1.23
CPSF4-204ENST00000436336 PANX3Q96QZ0 392 aa22.73■■□□□ 1.23
CPSF4-204ENST00000436336 SELENOSQ9BQE4 189 aa22.73■■□□□ 1.23
CPSF4-204ENST00000436336 WDR26Q9H7D7 661 aa22.73■■□□□ 1.23
CPSF4-204ENST00000436336 GPAMQ9HCL2 828 aa22.73■■□□□ 1.23
CPSF4-204ENST00000436336 KCNK9Q9NPC2 374 aa22.73■■□□□ 1.23
CPSF4-204ENST00000436336 ACOT9Q9Y305 439 aa22.73■■□□□ 1.23
CPSF4-204ENST00000436336 A0A087X1B8 175 aa22.72■■□□□ 1.23
CPSF4-204ENST00000436336 IGHV4-34P06331 123 aa22.72■■□□□ 1.23
CPSF4-204ENST00000436336 NUDT1P36639 197 aa22.72■■□□□ 1.23
CPSF4-204ENST00000436336 SKIV2L2P42285 1042 aaKnown RBP22.72■■□□□ 1.23
CPSF4-204ENST00000436336 CCT5P48643 541 aa22.72■■□□□ 1.23
CPSF4-204ENST00000436336 PGGT1BP53609 377 aa22.72■■□□□ 1.23
CPSF4-204ENST00000436336 PDAP1Q13442 181 aaKnown RBP22.72■■□□□ 1.23
CPSF4-204ENST00000436336 ZNF648Q5T619 568 aaPredicted RBP22.72■■□□□ 1.23
CPSF4-204ENST00000436336 FAM160A2Q8N612 972 aaPredicted RBP22.72■■□□□ 1.23
CPSF4-204ENST00000436336 FAM76AQ8TAV0 307 aa22.72■■□□□ 1.23
CPSF4-204ENST00000436336 SPACA7Q96KW9 195 aa22.72■■□□□ 1.23
CPSF4-204ENST00000436336 SLC13A1Q9BZW2 595 aa22.72■■□□□ 1.23
CPSF4-204ENST00000436336 FZD3Q9NPG1 666 aa22.72■■□□□ 1.23
CPSF4-204ENST00000436336 PRMT8Q9NR22 394 aaPredicted RBP22.72■■□□□ 1.23
CPSF4-204ENST00000436336 PHPT1Q9NRX4 125 aaPredicted RBP22.72■■□□□ 1.23
CPSF4-204ENST00000436336 DCDC2Q9UHG0 476 aa22.72■■□□□ 1.23
CPSF4-204ENST00000436336 CACNA1IQ9P0X4 2223 aa22.71■■□□□ 1.23
CPSF4-204ENST00000436336 CCDC163A0A0D9SF12 145 aa22.71■■□□□ 1.23
CPSF4-204ENST00000436336 TMEM120BA0PK00 339 aa22.71■■□□□ 1.23
CPSF4-204ENST00000436336 VEGFDO43915 354 aa22.71■■□□□ 1.23
CPSF4-204ENST00000436336 NDUFS2O75306 463 aa22.71■■□□□ 1.23
CPSF4-204ENST00000436336 FSBPO95073 299 aa22.71■■□□□ 1.23
CPSF4-204ENST00000436336 WISP3O95389 354 aaPredicted RBP22.71■■□□□ 1.23
CPSF4-204ENST00000436336 COL6A2P12110 1019 aa22.71■■□□□ 1.23
CPSF4-204ENST00000436336 CRHR1P34998 444 aa22.71■■□□□ 1.23
CPSF4-204ENST00000436336 SLC18A1P54219 525 aa22.71■■□□□ 1.23
CPSF4-204ENST00000436336 USP39Q53GS9 565 aaKnown RBP22.71■■□□□ 1.23
CPSF4-204ENST00000436336 ADGRG6Q86SQ4 1221 aa22.71■■□□□ 1.23
CPSF4-204ENST00000436336 TRIM74Q86UV6 250 aa22.71■■□□□ 1.23
CPSF4-204ENST00000436336 PIM3Q86V86 326 aa22.71■■□□□ 1.23
CPSF4-204ENST00000436336 GPR21Q99679 349 aa22.71■■□□□ 1.23
CPSF4-204ENST00000436336 PCED1AQ9H1Q7 454 aa22.71■■□□□ 1.23
CPSF4-204ENST00000436336 EPHX3Q9H6B9 360 aa22.71■■□□□ 1.23
CPSF4-204ENST00000436336 SYTL2Q9HCH5 934 aa22.71■■□□□ 1.23
CPSF4-204ENST00000436336 DMTF1Q9Y222 760 aa22.71■■□□□ 1.23
CPSF4-204ENST00000436336 OAS3Q9Y6K5 1087 aaKnown RBP22.71■■□□□ 1.23
CPSF4-204ENST00000436336 IQCF5A8MTL0 148 aa22.71■■□□□ 1.23
CPSF4-204ENST00000436336 FPGTO14772 594 aa22.71■■□□□ 1.23
CPSF4-204ENST00000436336 GLRA3O75311 464 aa22.71■■□□□ 1.23
CPSF4-204ENST00000436336 GSTA1P08263 222 aa22.71■■□□□ 1.23
CPSF4-204ENST00000436336 INSCQ1MX18 579 aa22.71■■□□□ 1.23
CPSF4-204ENST00000436336 DET1Q7L5Y6 550 aa22.71■■□□□ 1.23
CPSF4-204ENST00000436336 CLEC14AQ86T13 490 aa22.71■■□□□ 1.23
CPSF4-204ENST00000436336 LCA5Q86VQ0 697 aa22.71■■□□□ 1.23
CPSF4-204ENST00000436336 RASGEF1AQ8N9B8 481 aa22.71■■□□□ 1.23
CPSF4-204ENST00000436336 NAT14Q8WUY8 206 aa22.71■■□□□ 1.23
CPSF4-204ENST00000436336 BIRC7Q96CA5 298 aa22.71■■□□□ 1.23
CPSF4-204ENST00000436336 SGF29Q96ES7 293 aa22.71■■□□□ 1.23
CPSF4-204ENST00000436336 TSSK1BQ9BXA7 367 aa22.71■■□□□ 1.23
CPSF4-204ENST00000436336 CNOT10Q9H9A5 744 aaKnown RBP22.71■■□□□ 1.23
CPSF4-204ENST00000436336 TRMT6Q9UJA5 497 aaKnown RBP22.71■■□□□ 1.23
CPSF4-204ENST00000436336 SGTAO43765 313 aa22.7■■□□□ 1.22
CPSF4-204ENST00000436336 CDK14O94921 469 aa22.7■■□□□ 1.22
CPSF4-204ENST00000436336 AKT2P31751 481 aa22.7■■□□□ 1.22
CPSF4-204ENST00000436336 SLC26A3P40879 764 aa22.7■■□□□ 1.22
CPSF4-204ENST00000436336 CLCN7P51798 805 aa22.7■■□□□ 1.22
CPSF4-204ENST00000436336 IRF9Q00978 393 aa22.7■■□□□ 1.22
CPSF4-204ENST00000436336 GTF2H3Q13889 308 aa22.7■■□□□ 1.22
CPSF4-204ENST00000436336 KDM7AQ6ZMT4 941 aa22.7■■□□□ 1.22
CPSF4-204ENST00000436336 TBC1D1Q86TI0 1168 aaPredicted RBP22.7■■□□□ 1.22
CPSF4-204ENST00000436336 FUBP1Q96AE4 644 aaKnown RBP22.7■■□□□ 1.22
CPSF4-204ENST00000436336 FAM136AQ96C01 138 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms