RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.4■□□□□ 0.54
CLK1-205ENST00000434813 GPRIN3Q6ZVF9 776 aa18.4■□□□□ 0.54
CLK1-205ENST00000434813 SATL1Q86VE3 508 aa18.4■□□□□ 0.54
CLK1-205ENST00000434813 CHERPQ8IWX8 916 aaKnown RBP18.4■□□□□ 0.54
CLK1-205ENST00000434813 CPNE9Q8IYJ1 553 aa18.4■□□□□ 0.54
CLK1-205ENST00000434813 ZNF461Q8TAF7 563 aa18.4■□□□□ 0.54
CLK1-205ENST00000434813 LRRC58Q96CX6 371 aa18.4■□□□□ 0.54
CLK1-205ENST00000434813 ZFRQ96KR1 1074 aaKnown RBP18.4■□□□□ 0.54
CLK1-205ENST00000434813 ZNF382Q96SR6 550 aa18.4■□□□□ 0.54
CLK1-205ENST00000434813 CCT7Q99832 543 aa18.4■□□□□ 0.54
CLK1-205ENST00000434813 HGH1Q9BTY7 390 aa18.4■□□□□ 0.54
CLK1-205ENST00000434813 MRPS26Q9BYN8 205 aaKnown RBP18.4■□□□□ 0.54
CLK1-205ENST00000434813 TRIM54Q9BYV2 358 aa18.4■□□□□ 0.54
CLK1-205ENST00000434813 TRIM4Q9C037 500 aa18.4■□□□□ 0.54
CLK1-205ENST00000434813 BRINP2Q9C0B6 783 aa18.4■□□□□ 0.54
CLK1-205ENST00000434813 MCOLN1Q9GZU1 580 aa18.4■□□□□ 0.54
CLK1-205ENST00000434813 IL1RL2Q9HB29 575 aa18.4■□□□□ 0.54
CLK1-205ENST00000434813 NUDT4Q9NZJ9 180 aa18.4■□□□□ 0.54
CLK1-205ENST00000434813 TBX21Q9UL17 535 aa18.4■□□□□ 0.54
CLK1-205ENST00000434813 ZNF711Q9Y462 761 aa18.4■□□□□ 0.54
CLK1-205ENST00000434813 SLC4A7Q9Y6M7 1214 aa18.4■□□□□ 0.54
CLK1-205ENST00000434813 PLXNA4Q9HCM2 1894 aa18.4■□□□□ 0.54
CLK1-205ENST00000434813 A0A1W2PP18 115 aa18.4■□□□□ 0.54
CLK1-205ENST00000434813 C9JVG2 144 aa18.4■□□□□ 0.54
CLK1-205ENST00000434813 E5RI56 91 aa18.4■□□□□ 0.54
CLK1-205ENST00000434813 CHRM3P20309 590 aa18.4■□□□□ 0.54
CLK1-205ENST00000434813 RPL5P46777 297 aaKnown RBP18.4■□□□□ 0.54
CLK1-205ENST00000434813 CACNG1Q06432 222 aa18.4■□□□□ 0.54
CLK1-205ENST00000434813 PTPRRQ15256 657 aa18.4■□□□□ 0.54
CLK1-205ENST00000434813 RBBP7Q16576 425 aa18.4■□□□□ 0.54
CLK1-205ENST00000434813 CWF19L1Q69YN2 538 aaKnown RBP18.4■□□□□ 0.54
CLK1-205ENST00000434813 KIAA1841Q6NSI8 718 aa18.4■□□□□ 0.54
CLK1-205ENST00000434813 ERMP1Q7Z2K6 904 aa18.4■□□□□ 0.54
CLK1-205ENST00000434813 ANKFN1Q8N957 763 aa18.4■□□□□ 0.54
CLK1-205ENST00000434813 IGSF21Q96ID5 467 aa18.4■□□□□ 0.54
CLK1-205ENST00000434813 OSBPL11Q9BXB4 747 aa18.4■□□□□ 0.54
CLK1-205ENST00000434813 CMTM6Q9NX76 183 aa18.4■□□□□ 0.54
CLK1-205ENST00000434813 CD274Q9NZQ7 290 aa18.4■□□□□ 0.54
CLK1-205ENST00000434813 IL17CQ9P0M4 197 aa18.4■□□□□ 0.54
CLK1-205ENST00000434813 EIF2B4Q9UI10 523 aaKnown RBP18.4■□□□□ 0.54
CLK1-205ENST00000434813 LZTS1Q9Y250 596 aa18.4■□□□□ 0.54
CLK1-205ENST00000434813 ANAPC1Q9H1A4 1944 aa18.4■□□□□ 0.54
CLK1-205ENST00000434813 C7orf72A4D263 438 aa18.39■□□□□ 0.53
CLK1-205ENST00000434813 GIPC1O14908 333 aa18.39■□□□□ 0.53
CLK1-205ENST00000434813 PGM3O95394 542 aa18.39■□□□□ 0.53
CLK1-205ENST00000434813 CLPTM1O96005 669 aa18.39■□□□□ 0.53
CLK1-205ENST00000434813 CLTBP09497 229 aa18.39■□□□□ 0.53
CLK1-205ENST00000434813 MZF1P28698 734 aaPredicted RBP18.39■□□□□ 0.53
CLK1-205ENST00000434813 PPP3CCP48454 512 aa18.39■□□□□ 0.53
CLK1-205ENST00000434813 CLCN7P51798 805 aa18.39■□□□□ 0.53
CLK1-205ENST00000434813 KCNK10P57789 538 aa18.39■□□□□ 0.53
CLK1-205ENST00000434813 RHOAP61586 193 aa18.39■□□□□ 0.53
CLK1-205ENST00000434813 TXNL4AP83876 142 aaKnown RBP18.39■□□□□ 0.53
CLK1-205ENST00000434813 TWF1Q12792 350 aa18.39■□□□□ 0.53
CLK1-205ENST00000434813 CAPRIN1Q14444 709 aaKnown RBP18.39■□□□□ 0.53
CLK1-205ENST00000434813 TGFBIQ15582 683 aa18.39■□□□□ 0.53
CLK1-205ENST00000434813 NRF1Q16656 503 aa18.39■□□□□ 0.53
CLK1-205ENST00000434813 PDCD4Q53EL6 469 aaKnown RBP18.39■□□□□ 0.53
CLK1-205ENST00000434813 TPGS2Q68CL5 300 aa18.39■□□□□ 0.53
CLK1-205ENST00000434813 NAT14Q8WUY8 206 aa18.39■□□□□ 0.53
CLK1-205ENST00000434813 CANT1Q8WVQ1 401 aa18.39■□□□□ 0.53
CLK1-205ENST00000434813 PLEKHG4BQ96PX9 1271 aa18.39■□□□□ 0.53
CLK1-205ENST00000434813 CCM2LQ9NUG4 571 aaPredicted RBP18.39■□□□□ 0.53
CLK1-205ENST00000434813 TMEM45AQ9NWC5 275 aa18.39■□□□□ 0.53
CLK1-205ENST00000434813 FNDC3AQ9Y2H6 1198 aaKnown RBP18.39■□□□□ 0.53
CLK1-205ENST00000434813 PKP3Q9Y446 797 aa18.39■□□□□ 0.53
CLK1-205ENST00000434813 PCDHA9Q9Y5H5 950 aa18.39■□□□□ 0.53
CLK1-205ENST00000434813 H0Y626 953 aa18.39■□□□□ 0.53
CLK1-205ENST00000434813 TBL1XO60907 577 aa18.39■□□□□ 0.53
CLK1-205ENST00000434813 TFAP2AP05549 437 aa18.39■□□□□ 0.53
CLK1-205ENST00000434813 BMP2P12643 396 aa18.39■□□□□ 0.53
CLK1-205ENST00000434813 PSMC3P17980 439 aa18.39■□□□□ 0.53
CLK1-205ENST00000434813 HMGCLP35914 325 aa18.39■□□□□ 0.53
CLK1-205ENST00000434813 ZFP36L2P47974 494 aaKnown RBP18.39■□□□□ 0.53
CLK1-205ENST00000434813 ERVK-8P63133 956 aa18.39■□□□□ 0.53
CLK1-205ENST00000434813 APOFQ13790 326 aa18.39■□□□□ 0.53
CLK1-205ENST00000434813 CARNMT1Q8N4J0 409 aa18.39■□□□□ 0.53
CLK1-205ENST00000434813 HJURPQ8NCD3 748 aaPredicted RBP18.39■□□□□ 0.53
CLK1-205ENST00000434813 PDLIM5Q96HC4 596 aaKnown RBP18.39■□□□□ 0.53
CLK1-205ENST00000434813 MUC13Q9H3R2 512 aa18.39■□□□□ 0.53
CLK1-205ENST00000434813 MAGEE1Q9HCI5 957 aa18.39■□□□□ 0.53
CLK1-205ENST00000434813 RIC8BQ9NVN3 520 aa18.39■□□□□ 0.53
CLK1-205ENST00000434813 ACTR3BQ9P1U1 418 aa18.39■□□□□ 0.53
CLK1-205ENST00000434813 APPL1Q9UKG1 709 aa18.39■□□□□ 0.53
CLK1-205ENST00000434813 ASB1Q9Y576 335 aa18.39■□□□□ 0.53
CLK1-205ENST00000434813 PCDHB1Q9Y5F3 818 aa18.39■□□□□ 0.53
CLK1-205ENST00000434813 OR51B4Q9Y5P0 310 aa18.39■□□□□ 0.53
CLK1-205ENST00000434813 COMMD3-BMI1R4GMX3 469 aa18.39■□□□□ 0.53
CLK1-205ENST00000434813 ASPDHA6ND91 283 aa18.38■□□□□ 0.53
CLK1-205ENST00000434813 EEDO75530 441 aaKnown RBP18.38■□□□□ 0.53
CLK1-205ENST00000434813 RFC2P35250 354 aa18.38■□□□□ 0.53
CLK1-205ENST00000434813 INPP5AQ14642 412 aa18.38■□□□□ 0.53
CLK1-205ENST00000434813 VEPH1Q14D04 833 aa18.38■□□□□ 0.53
CLK1-205ENST00000434813 TAF12Q16514 161 aa18.38■□□□□ 0.53
CLK1-205ENST00000434813 TAS2R42Q7RTR8 314 aa18.38■□□□□ 0.53
CLK1-205ENST00000434813 AMIGO2Q86SJ2 522 aa18.38■□□□□ 0.53
CLK1-205ENST00000434813 OR2T11Q8NH01 316 aa18.38■□□□□ 0.53
CLK1-205ENST00000434813 FEM1AQ9BSK4 669 aa18.38■□□□□ 0.53
CLK1-205ENST00000434813 NOL11Q9H8H0 719 aaKnown RBP18.38■□□□□ 0.53
CLK1-205ENST00000434813 SMPD4Q9NXE4 827 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms