RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 FAM187AA6NFU0 413 aa15.32■□□□□ 0.04
TREX1-201ENST00000433541 SDR42E2A6NKP2 422 aa15.32■□□□□ 0.04
TREX1-201ENST00000433541 H7C0S8 307 aa15.32■□□□□ 0.04
TREX1-201ENST00000433541 NDC80O14777 642 aa15.32■□□□□ 0.04
TREX1-201ENST00000433541 GOT2P00505 430 aaKnown RBP15.32■□□□□ 0.04
TREX1-201ENST00000433541 CDKN1CP49918 316 aaPredicted RBP15.32■□□□□ 0.04
TREX1-201ENST00000433541 TUBB2AQ13885 445 aa15.32■□□□□ 0.04
TREX1-201ENST00000433541 SMAD1Q15797 465 aaKnown RBP15.32■□□□□ 0.04
TREX1-201ENST00000433541 DNAJC21Q5F1R6 531 aaKnown RBP15.32■□□□□ 0.04
TREX1-201ENST00000433541 DNTTIP2Q5QJE6 756 aaKnown RBP15.32■□□□□ 0.04
TREX1-201ENST00000433541 C8orf74Q6P047 294 aa15.32■□□□□ 0.04
TREX1-201ENST00000433541 TMEM220Q6QAJ8 160 aa15.32■□□□□ 0.04
TREX1-201ENST00000433541 CES3Q6UWW8 571 aa15.32■□□□□ 0.04
TREX1-201ENST00000433541 HOOK3Q86VS8 718 aa15.32■□□□□ 0.04
TREX1-201ENST00000433541 SERPINA9Q86WD7 417 aa15.32■□□□□ 0.04
TREX1-201ENST00000433541 ARL10Q8N8L6 244 aa15.32■□□□□ 0.04
TREX1-201ENST00000433541 PNPLA1Q8N8W4 532 aa15.32■□□□□ 0.04
TREX1-201ENST00000433541 KYQ8NBH2 561 aa15.32■□□□□ 0.04
TREX1-201ENST00000433541 OR13J1Q8NGT2 312 aa15.32■□□□□ 0.04
TREX1-201ENST00000433541 BAHD1Q8TBE0 780 aaPredicted RBP15.32■□□□□ 0.04
TREX1-201ENST00000433541 GPBAR1Q8TDU6 330 aa15.32■□□□□ 0.04
TREX1-201ENST00000433541 ZDHHC1Q8WTX9 485 aa15.32■□□□□ 0.04
TREX1-201ENST00000433541 ZNF669Q96BR6 464 aaPredicted RBP15.32■□□□□ 0.04
TREX1-201ENST00000433541 TUBB2BQ9BVA1 445 aa15.32■□□□□ 0.04
TREX1-201ENST00000433541 SOX13Q9UN79 622 aa15.32■□□□□ 0.04
TREX1-201ENST00000433541 PDZK1P1A8MUH7 402 aa15.31■□□□□ 0.04
TREX1-201ENST00000433541 RAD51CO43502 376 aa15.31■□□□□ 0.04
TREX1-201ENST00000433541 RFPL3O75679 317 aa15.31■□□□□ 0.04
TREX1-201ENST00000433541 PRSS56P0CW18 603 aa15.31■□□□□ 0.04
TREX1-201ENST00000433541 ZNF7P17097 686 aaPredicted RBP15.31■□□□□ 0.04
TREX1-201ENST00000433541 ACRV1P26436 265 aa15.31■□□□□ 0.04
TREX1-201ENST00000433541 NMBRP28336 390 aa15.31■□□□□ 0.04
TREX1-201ENST00000433541 PPARGP37231 505 aaPredicted RBP15.31■□□□□ 0.04
TREX1-201ENST00000433541 ITGA8P53708 1063 aa15.31■□□□□ 0.04
TREX1-201ENST00000433541 FOXC1Q12948 553 aa15.31■□□□□ 0.04
TREX1-201ENST00000433541 MORF4L2Q15014 288 aa15.31■□□□□ 0.04
TREX1-201ENST00000433541 SEPT7Q16181 437 aaKnown RBP15.31■□□□□ 0.04
TREX1-201ENST00000433541 PROX2Q3B8N5 592 aa15.31■□□□□ 0.04
TREX1-201ENST00000433541 BBS9Q3SYG4 887 aa15.31■□□□□ 0.04
TREX1-201ENST00000433541 MICALCLQ6ZW33 695 aa15.31■□□□□ 0.04
TREX1-201ENST00000433541 CAND1Q86VP6 1230 aaKnown RBP15.31■□□□□ 0.04
TREX1-201ENST00000433541 SLC35F3Q8IY50 421 aa15.31■□□□□ 0.04
TREX1-201ENST00000433541 MPP5Q8N3R9 675 aa15.31■□□□□ 0.04
TREX1-201ENST00000433541 RASGEF1AQ8N9B8 481 aa15.31■□□□□ 0.04
TREX1-201ENST00000433541 BBOF1Q8ND07 529 aa15.31■□□□□ 0.04
TREX1-201ENST00000433541 OR4L1Q8NH43 312 aa15.31■□□□□ 0.04
TREX1-201ENST00000433541 NAT14Q8WUY8 206 aa15.31■□□□□ 0.04
TREX1-201ENST00000433541 HEXDCQ8WVB3 486 aa15.31■□□□□ 0.04
TREX1-201ENST00000433541 PEX13Q92968 403 aa15.31■□□□□ 0.04
TREX1-201ENST00000433541 SGF29Q96ES7 293 aa15.31■□□□□ 0.04
TREX1-201ENST00000433541 SCARF2Q96GP6 870 aaPredicted RBP15.31■□□□□ 0.04
TREX1-201ENST00000433541 RAB17Q9H0T7 212 aa15.31■□□□□ 0.04
TREX1-201ENST00000433541 ABCG4Q9H172 646 aa15.31■□□□□ 0.04
TREX1-201ENST00000433541 CATSPERZQ9NTU4 200 aa15.31■□□□□ 0.04
TREX1-201ENST00000433541 ZDHHC3Q9NYG2 299 aa15.31■□□□□ 0.04
TREX1-201ENST00000433541 RIMKLBQ9ULI2 386 aa15.31■□□□□ 0.04
TREX1-201ENST00000433541 PADI4Q9UM07 663 aa15.31■□□□□ 0.04
TREX1-201ENST00000433541 SNX24Q9Y343 169 aa15.31■□□□□ 0.04
TREX1-201ENST00000433541 MRFAP1Q9Y605 127 aa15.31■□□□□ 0.04
TREX1-201ENST00000433541 TRBV23OR9-2A0A075B6M9 112 aa15.3■□□□□ 0.04
TREX1-201ENST00000433541 CTAGE15A4D2H0 777 aa15.3■□□□□ 0.04
TREX1-201ENST00000433541 SMAPO00193 183 aa15.3■□□□□ 0.04
TREX1-201ENST00000433541 CHUKO15111 745 aa15.3■□□□□ 0.04
TREX1-201ENST00000433541 VAPBO95292 243 aa15.3■□□□□ 0.04
TREX1-201ENST00000433541 CTAGE8P0CG41 777 aa15.3■□□□□ 0.04
TREX1-201ENST00000433541 GIMD1P0DJR0 217 aa15.3■□□□□ 0.04
TREX1-201ENST00000433541 CKMT1AP12532 417 aa15.3■□□□□ 0.04
TREX1-201ENST00000433541 ATP1B2P14415 290 aaPredicted RBP15.3■□□□□ 0.04
TREX1-201ENST00000433541 PMLP29590 882 aa15.3■□□□□ 0.04
TREX1-201ENST00000433541 CA5AP35218 305 aa15.3■□□□□ 0.04
TREX1-201ENST00000433541 AARS2Q5JTZ9 985 aaKnown RBP15.3■□□□□ 0.04
TREX1-201ENST00000433541 N4BP2L1Q5TBK1 243 aaPredicted RBP15.3■□□□□ 0.04
TREX1-201ENST00000433541 LYPLAL1Q5VWZ2 237 aa15.3■□□□□ 0.04
TREX1-201ENST00000433541 EFL1Q7Z2Z2 1120 aaKnown RBP15.3■□□□□ 0.04
TREX1-201ENST00000433541 GLRX5Q86SX6 157 aa15.3■□□□□ 0.04
TREX1-201ENST00000433541 CTAGE6Q86UF2 777 aa15.3■□□□□ 0.04
TREX1-201ENST00000433541 NRROSQ86YC3 692 aa15.3■□□□□ 0.04
TREX1-201ENST00000433541 CTAGE4Q8IX94 777 aa15.3■□□□□ 0.04
TREX1-201ENST00000433541 PDIK1LQ8N165 341 aa15.3■□□□□ 0.04
TREX1-201ENST00000433541 FAM181AQ8N9Y4 354 aa15.3■□□□□ 0.04
TREX1-201ENST00000433541 IFI44Q8TCB0 444 aa15.3■□□□□ 0.04
TREX1-201ENST00000433541 MFSD3Q96ES6 412 aa15.3■□□□□ 0.04
TREX1-201ENST00000433541 STAMBPL1Q96FJ0 436 aa15.3■□□□□ 0.04
TREX1-201ENST00000433541 ZNF514Q96K75 400 aaPredicted RBP15.3■□□□□ 0.04
TREX1-201ENST00000433541 KIFC1Q9BW19 673 aa15.3■□□□□ 0.04
TREX1-201ENST00000433541 BOCQ9BWV1 1114 aa15.3■□□□□ 0.04
TREX1-201ENST00000433541 ZMYND15Q9H091 742 aa15.3■□□□□ 0.04
TREX1-201ENST00000433541 STN1Q9H668 368 aaKnown RBP15.3■□□□□ 0.04
TREX1-201ENST00000433541 VPS37BQ9H9H4 285 aa15.3■□□□□ 0.04
TREX1-201ENST00000433541 MRM3Q9HC36 420 aaKnown RBP15.3■□□□□ 0.04
TREX1-201ENST00000433541 SPATS2LQ9NUQ6 558 aaKnown RBP15.3■□□□□ 0.04
TREX1-201ENST00000433541 PCYT1BQ9Y5K3 369 aaPredicted RBP15.3■□□□□ 0.04
TREX1-201ENST00000433541 RP1P56715 2156 aa15.29■□□□□ 0.04
TREX1-201ENST00000433541 MAGEB16A2A368 324 aa15.29■□□□□ 0.04
TREX1-201ENST00000433541 PFDN6O15212 129 aa15.29■□□□□ 0.04
TREX1-201ENST00000433541 CD3EAPO15446 510 aaKnown RBP15.29■□□□□ 0.04
TREX1-201ENST00000433541 SEC31AO94979 1220 aaKnown RBP15.29■□□□□ 0.04
TREX1-201ENST00000433541 SLC2A4P14672 509 aa15.29■□□□□ 0.04
TREX1-201ENST00000433541 FOXN2P32314 431 aa15.29■□□□□ 0.04
TREX1-201ENST00000433541 RPL21P46778 160 aaKnown RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms