RNA–Protein interactions for RNA: ENST00000431352.1

SEC13-211, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 832 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-211ENST00000431352 XPO4Q9C0E2 1151 aaKnown RBP13.7□□□□□ -0.22
SEC13-211ENST00000431352 BPIFA1Q9NP55 256 aa13.7□□□□□ -0.22
SEC13-211ENST00000431352 RAD18Q9NS91 495 aa13.7□□□□□ -0.22
SEC13-211ENST00000431352 ZNF624Q9P2J8 865 aaPredicted RBP13.7□□□□□ -0.22
SEC13-211ENST00000431352 TMEM184BQ9Y519 407 aaPredicted RBP13.7□□□□□ -0.22
SEC13-211ENST00000431352 SPO11Q9Y5K1 396 aa13.7□□□□□ -0.22
SEC13-211ENST00000431352 PTPN13Q12923 2485 aa13.69□□□□□ -0.22
SEC13-211ENST00000431352 BSNQ9UPA5 3926 aa13.69□□□□□ -0.22
SEC13-211ENST00000431352 C3orf70A6NLC5 250 aaPredicted RBP13.69□□□□□ -0.22
SEC13-211ENST00000431352 OR52A4PA6NMU1 304 aa13.69□□□□□ -0.22
SEC13-211ENST00000431352 AURKAO14965 403 aa13.69□□□□□ -0.22
SEC13-211ENST00000431352 KMOO15229 486 aa13.69□□□□□ -0.22
SEC13-211ENST00000431352 AKR1B10O60218 316 aa13.69□□□□□ -0.22
SEC13-211ENST00000431352 ANKRD34CP0C6C1 535 aa13.69□□□□□ -0.22
SEC13-211ENST00000431352 TMEM253P0C7T8 217 aa13.69□□□□□ -0.22
SEC13-211ENST00000431352 BPIP17213 487 aa13.69□□□□□ -0.22
SEC13-211ENST00000431352 TCN2P20062 427 aa13.69□□□□□ -0.22
SEC13-211ENST00000431352 SLC19A1P41440 591 aa13.69□□□□□ -0.22
SEC13-211ENST00000431352 CDK18Q07002 472 aa13.69□□□□□ -0.22
SEC13-211ENST00000431352 ABHD18Q0P651 414 aa13.69□□□□□ -0.22
SEC13-211ENST00000431352 NOMO1Q15155 1222 aa13.69□□□□□ -0.22
SEC13-211ENST00000431352 LLGL1Q15334 1064 aa13.69□□□□□ -0.22
SEC13-211ENST00000431352 ODF2Q5BJF6 829 aa13.69□□□□□ -0.22
SEC13-211ENST00000431352 SLC9A4Q6AI14 798 aa13.69□□□□□ -0.22
SEC13-211ENST00000431352 IRGCQ6NXR0 463 aa13.69□□□□□ -0.22
SEC13-211ENST00000431352 FAM92BQ6ZTR7 304 aa13.69□□□□□ -0.22
SEC13-211ENST00000431352 RASGRP3Q8IV61 690 aa13.69□□□□□ -0.22
SEC13-211ENST00000431352 ESX1Q8N693 406 aa13.69□□□□□ -0.22
SEC13-211ENST00000431352 GALNT6Q8NCL4 622 aa13.69□□□□□ -0.22
SEC13-211ENST00000431352 GDAP1Q8TB36 358 aa13.69□□□□□ -0.22
SEC13-211ENST00000431352 SLC35G2Q8TBE7 412 aa13.69□□□□□ -0.22
SEC13-211ENST00000431352 RSC1A1Q92681 617 aa13.69□□□□□ -0.22
SEC13-211ENST00000431352 CXorf40BQ96DE9 158 aa13.69□□□□□ -0.22
SEC13-211ENST00000431352 OLFM3Q96PB7 478 aa13.69□□□□□ -0.22
SEC13-211ENST00000431352 OR6C1Q96RD1 312 aa13.69□□□□□ -0.22
SEC13-211ENST00000431352 SLC25A51Q9H1U9 297 aa13.69□□□□□ -0.22
SEC13-211ENST00000431352 TRIT1Q9H3H1 467 aaKnown RBP13.69□□□□□ -0.22
SEC13-211ENST00000431352 MAGEE1Q9HCI5 957 aa13.69□□□□□ -0.22
SEC13-211ENST00000431352 LCMT1Q9UIC8 334 aa13.69□□□□□ -0.22
SEC13-211ENST00000431352 LNPEPQ9UIQ6 1025 aa13.69□□□□□ -0.22
SEC13-211ENST00000431352 TUBD1Q9UJT1 453 aa13.69□□□□□ -0.22
SEC13-211ENST00000431352 HYOU1Q9Y4L1 999 aa13.69□□□□□ -0.22
SEC13-211ENST00000431352 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.69□□□□□ -0.22
SEC13-211ENST00000431352 RPS6KL1Q9Y6S9 549 aa13.69□□□□□ -0.22
SEC13-211ENST00000431352 GPR89AB7ZAQ6 455 aa13.68□□□□□ -0.22
SEC13-211ENST00000431352 CHUKO15111 745 aa13.68□□□□□ -0.22
SEC13-211ENST00000431352 KIF1CO43896 1103 aaKnown RBP13.68□□□□□ -0.22
SEC13-211ENST00000431352 KIAA0754O94854 1291 aa13.68□□□□□ -0.22
SEC13-211ENST00000431352 CDK14O94921 469 aa13.68□□□□□ -0.22
SEC13-211ENST00000431352 NDST3O95803 873 aa13.68□□□□□ -0.22
SEC13-211ENST00000431352 C9P02748 559 aa13.68□□□□□ -0.22
SEC13-211ENST00000431352 TPM3P06753 285 aa13.68□□□□□ -0.22
SEC13-211ENST00000431352 GPR89BP0CG08 455 aa13.68□□□□□ -0.22
SEC13-211ENST00000431352 XRCC1P18887 633 aaPredicted RBP13.68□□□□□ -0.22
SEC13-211ENST00000431352 F8A1P23610 371 aa13.68□□□□□ -0.22
SEC13-211ENST00000431352 DLSTP36957 453 aa13.68□□□□□ -0.22
SEC13-211ENST00000431352 CAPZBP47756 277 aa13.68□□□□□ -0.22
SEC13-211ENST00000431352 CLCNKAP51800 687 aa13.68□□□□□ -0.22
SEC13-211ENST00000431352 MC1RQ01726 317 aa13.68□□□□□ -0.22
SEC13-211ENST00000431352 GTF2H3Q13889 308 aa13.68□□□□□ -0.22
SEC13-211ENST00000431352 GPR18Q14330 331 aa13.68□□□□□ -0.22
SEC13-211ENST00000431352 IGFBP7Q16270 282 aa13.68□□□□□ -0.22
SEC13-211ENST00000431352 PDPK2PQ6A1A2 396 aa13.68□□□□□ -0.22
SEC13-211ENST00000431352 CCDC70Q6NSX1 233 aa13.68□□□□□ -0.22
SEC13-211ENST00000431352 TMC3Q7Z5M5 1100 aa13.68□□□□□ -0.22
SEC13-211ENST00000431352 ZNF547Q8IVP9 402 aa13.68□□□□□ -0.22
SEC13-211ENST00000431352 APOBEC4Q8WW27 367 aaKnown RBP13.68□□□□□ -0.22
SEC13-211ENST00000431352 STAMBPL1Q96FJ0 436 aa13.68□□□□□ -0.22
SEC13-211ENST00000431352 TIMM29Q9BSF4 260 aa13.68□□□□□ -0.22
SEC13-211ENST00000431352 GLOD4Q9HC38 313 aa13.68□□□□□ -0.22
SEC13-211ENST00000431352 SPTLC3Q9NUV7 552 aa13.68□□□□□ -0.22
SEC13-211ENST00000431352 CROTQ9UKG9 612 aa13.68□□□□□ -0.22
SEC13-211ENST00000431352 A0A0A6YYK5 440 aaPredicted RBP13.67□□□□□ -0.22
SEC13-211ENST00000431352 GPR39O43194 453 aa13.67□□□□□ -0.22
SEC13-211ENST00000431352 VEGFDO43915 354 aa13.67□□□□□ -0.22
SEC13-211ENST00000431352 KATNA1O75449 491 aa13.67□□□□□ -0.22
SEC13-211ENST00000431352 BRAFP15056 766 aa13.67□□□□□ -0.22
SEC13-211ENST00000431352 ZFXP17010 805 aaPredicted RBP13.67□□□□□ -0.22
SEC13-211ENST00000431352 IDSP22304 550 aa13.67□□□□□ -0.22
SEC13-211ENST00000431352 PTPN3P26045 913 aa13.67□□□□□ -0.22
SEC13-211ENST00000431352 HNRNPH3P31942 346 aaKnown RBP13.67□□□□□ -0.22
SEC13-211ENST00000431352 PPP1CAP62136 330 aa13.67□□□□□ -0.22
SEC13-211ENST00000431352 ASTE1Q2TB18 679 aaPredicted RBP13.67□□□□□ -0.22
SEC13-211ENST00000431352 ATP13A5Q4VNC0 1218 aa13.67□□□□□ -0.22
SEC13-211ENST00000431352 CACHD1Q5VU97 1274 aa13.67□□□□□ -0.22
SEC13-211ENST00000431352 C6orf15Q6UXA7 325 aaPredicted RBP13.67□□□□□ -0.22
SEC13-211ENST00000431352 SLC25A41Q8N5S1 370 aa13.67□□□□□ -0.22
SEC13-211ENST00000431352 OR8K1Q8NGG5 319 aa13.67□□□□□ -0.22
SEC13-211ENST00000431352 ABHD17AQ96GS6 310 aa13.67□□□□□ -0.22
SEC13-211ENST00000431352 UCK1Q9HA47 277 aa13.67□□□□□ -0.22
SEC13-211ENST00000431352 POT1Q9NUX5 634 aa13.67□□□□□ -0.22
SEC13-211ENST00000431352 ZNHIT6Q9NWK9 470 aaKnown RBP13.67□□□□□ -0.22
SEC13-211ENST00000431352 NFKBIL1Q9UBC1 381 aaPredicted RBP13.67□□□□□ -0.22
SEC13-211ENST00000431352 SAE1Q9UBE0 346 aaPredicted RBP13.67□□□□□ -0.22
SEC13-211ENST00000431352 TMPRSS11EQ9UL52 423 aa13.67□□□□□ -0.22
SEC13-211ENST00000431352 NAV2Q8IVL1 2488 aa13.67□□□□□ -0.22
SEC13-211ENST00000431352 ZNF106Q9H2Y7 1883 aaKnown RBP13.66□□□□□ -0.22
SEC13-211ENST00000431352 ZNF487B1APH4 448 aa13.66□□□□□ -0.22
SEC13-211ENST00000431352 SPOPO43791 374 aa13.66□□□□□ -0.22
SEC13-211ENST00000431352 NDUFA10O95299 355 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms