RNA–Protein interactions for RNA: ENST00000431127.1

CTDSP1-203, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-203ENST00000431127 CDCP2Q5VXM1 449 aa17.14■□□□□ 0.33
CTDSP1-203ENST00000431127 NAGSQ8N159 534 aa17.14■□□□□ 0.33
CTDSP1-203ENST00000431127 DCBLD1Q8N8Z6 715 aa17.14■□□□□ 0.33
CTDSP1-203ENST00000431127 PEX13Q92968 403 aa17.14■□□□□ 0.33
CTDSP1-203ENST00000431127 DCUN1D1Q96GG9 259 aa17.14■□□□□ 0.33
CTDSP1-203ENST00000431127 CDKN2AIPNLQ96HQ2 116 aa17.14■□□□□ 0.33
CTDSP1-203ENST00000431127 DEPDC7Q96QD5 511 aa17.14■□□□□ 0.33
CTDSP1-203ENST00000431127 KLC4Q9NSK0 619 aa17.14■□□□□ 0.33
CTDSP1-203ENST00000431127 KCNK6Q9Y257 313 aa17.14■□□□□ 0.33
CTDSP1-203ENST00000431127 DNMT3AQ9Y6K1 912 aaPredicted RBP17.14■□□□□ 0.33
CTDSP1-203ENST00000431127 CHD6Q8TD26 2715 aa17.13■□□□□ 0.33
CTDSP1-203ENST00000431127 FAM149AA5PLN7 773 aa17.13■□□□□ 0.33
CTDSP1-203ENST00000431127 KLHL33A6NCF5 533 aa17.13■□□□□ 0.33
CTDSP1-203ENST00000431127 OR5K4A6NMS3 321 aa17.13■□□□□ 0.33
CTDSP1-203ENST00000431127 GPR39O43194 453 aa17.13■□□□□ 0.33
CTDSP1-203ENST00000431127 MC4RP32245 332 aa17.13■□□□□ 0.33
CTDSP1-203ENST00000431127 NPY2RP49146 381 aa17.13■□□□□ 0.33
CTDSP1-203ENST00000431127 MAZP56270 477 aaKnown RBP17.13■□□□□ 0.33
CTDSP1-203ENST00000431127 TARDBPQ13148 414 aaKnown RBP eCLIP17.13■□□□□ 0.33
CTDSP1-203ENST00000431127 CCDC38Q502W7 563 aa17.13■□□□□ 0.33
CTDSP1-203ENST00000431127 ZNF547Q8IVP9 402 aa17.13■□□□□ 0.33
CTDSP1-203ENST00000431127 NXPE1Q8N323 547 aa17.13■□□□□ 0.33
CTDSP1-203ENST00000431127 ARL14Q8N4G2 192 aa17.13■□□□□ 0.33
CTDSP1-203ENST00000431127 RASGEF1AQ8N9B8 481 aa17.13■□□□□ 0.33
CTDSP1-203ENST00000431127 AVL9Q8NBF6 648 aa17.13■□□□□ 0.33
CTDSP1-203ENST00000431127 GRAMD1AQ96CP6 724 aa17.13■□□□□ 0.33
CTDSP1-203ENST00000431127 IL22Q9GZX6 179 aa17.13■□□□□ 0.33
CTDSP1-203ENST00000431127 BFARQ9NZS9 450 aa17.13■□□□□ 0.33
CTDSP1-203ENST00000431127 RNF14Q9UBS8 474 aa17.13■□□□□ 0.33
CTDSP1-203ENST00000431127 TBC1D29Q9UFV1 150 aa17.13■□□□□ 0.33
CTDSP1-203ENST00000431127 RNF215Q9Y6U7 377 aa17.13■□□□□ 0.33
CTDSP1-203ENST00000431127 KIR2DS5A0A0G2JLQ3 304 aa17.12■□□□□ 0.33
CTDSP1-203ENST00000431127 A0A0G2JNG1 304 aa17.12■□□□□ 0.33
CTDSP1-203ENST00000431127 CFAP99D6REC4 459 aa17.12■□□□□ 0.33
CTDSP1-203ENST00000431127 KIR2DS3K7RE56 304 aa17.12■□□□□ 0.33
CTDSP1-203ENST00000431127 F3P13726 295 aa17.12■□□□□ 0.33
CTDSP1-203ENST00000431127 PAFAH1B1P43034 410 aa17.12■□□□□ 0.33
CTDSP1-203ENST00000431127 MAGEA6P43360 314 aa17.12■□□□□ 0.33
CTDSP1-203ENST00000431127 GPR3P46089 330 aa17.12■□□□□ 0.33
CTDSP1-203ENST00000431127 VPS41P49754 854 aa17.12■□□□□ 0.33
CTDSP1-203ENST00000431127 CACNG1Q06432 222 aa17.12■□□□□ 0.33
CTDSP1-203ENST00000431127 SPIDRQ14159 915 aa17.12■□□□□ 0.33
CTDSP1-203ENST00000431127 KIR2DS5Q14953 304 aa17.12■□□□□ 0.33
CTDSP1-203ENST00000431127 ZRANB3Q5FWF4 1079 aa17.12■□□□□ 0.33
CTDSP1-203ENST00000431127 PCID2Q5JVF3 399 aa17.12■□□□□ 0.33
CTDSP1-203ENST00000431127 TSTD2Q5T7W7 516 aa17.12■□□□□ 0.33
CTDSP1-203ENST00000431127 IYDQ6PHW0 289 aa17.12■□□□□ 0.33
CTDSP1-203ENST00000431127 RBM44Q6ZP01 1051 aaKnown RBP17.12■□□□□ 0.33
CTDSP1-203ENST00000431127 ZNF438Q7Z4V0 828 aa17.12■□□□□ 0.33
CTDSP1-203ENST00000431127 AMZ2Q86W34 360 aa17.12■□□□□ 0.33
CTDSP1-203ENST00000431127 CCNJLQ8IV13 435 aa17.12■□□□□ 0.33
CTDSP1-203ENST00000431127 SFTPA2Q8IWL1 248 aa17.12■□□□□ 0.33
CTDSP1-203ENST00000431127 SFRP1Q8N474 314 aa17.12■□□□□ 0.33
CTDSP1-203ENST00000431127 PPHLN1Q8NEY8 458 aaKnown RBP17.12■□□□□ 0.33
CTDSP1-203ENST00000431127 COPS8Q99627 209 aa17.12■□□□□ 0.33
CTDSP1-203ENST00000431127 OSGEPL1Q9H4B0 414 aa17.12■□□□□ 0.33
CTDSP1-203ENST00000431127 STN1Q9H668 368 aaKnown RBP17.12■□□□□ 0.33
CTDSP1-203ENST00000431127 SLC23A2Q9UGH3 650 aa17.12■□□□□ 0.33
CTDSP1-203ENST00000431127 TCAF1Q9Y4C2 921 aa17.12■□□□□ 0.33
CTDSP1-203ENST00000431127 ARHGEF17Q96PE2 2063 aaPredicted RBP17.12■□□□□ 0.33
CTDSP1-203ENST00000431127 ASXL3Q9C0F0 2248 aa17.12■□□□□ 0.33
CTDSP1-203ENST00000431127 PTPRBP23467 1997 aa17.11■□□□□ 0.33
CTDSP1-203ENST00000431127 TRBV5-4A0A0C4DH59 114 aa17.11■□□□□ 0.33
CTDSP1-203ENST00000431127 A6NCN8 305 aa17.11■□□□□ 0.33
CTDSP1-203ENST00000431127 CCL22O00626 93 aa17.11■□□□□ 0.33
CTDSP1-203ENST00000431127 SNX2O60749 519 aa17.11■□□□□ 0.33
CTDSP1-203ENST00000431127 IDSP22304 550 aa17.11■□□□□ 0.33
CTDSP1-203ENST00000431127 CA5AP35218 305 aa17.11■□□□□ 0.33
CTDSP1-203ENST00000431127 FASLGP48023 281 aa17.11■□□□□ 0.33
CTDSP1-203ENST00000431127 CLDN6P56747 220 aa17.11■□□□□ 0.33
CTDSP1-203ENST00000431127 SESN2P58004 480 aaPredicted RBP17.11■□□□□ 0.33
CTDSP1-203ENST00000431127 NR1D2Q14995 579 aa17.11■□□□□ 0.33
CTDSP1-203ENST00000431127 PLA2G4EQ3MJ16 856 aa17.11■□□□□ 0.33
CTDSP1-203ENST00000431127 ARMC3Q5W041 872 aa17.11■□□□□ 0.33
CTDSP1-203ENST00000431127 LRRC8BQ6P9F7 803 aa17.11■□□□□ 0.33
CTDSP1-203ENST00000431127 TMEM220Q6QAJ8 160 aa17.11■□□□□ 0.33
CTDSP1-203ENST00000431127 TAS2R42Q7RTR8 314 aa17.11■□□□□ 0.33
CTDSP1-203ENST00000431127 SPRED1Q7Z699 444 aa17.11■□□□□ 0.33
CTDSP1-203ENST00000431127 C11orf96Q7Z7L8 435 aa17.11■□□□□ 0.33
CTDSP1-203ENST00000431127 SLC9B2Q86UD5 537 aa17.11■□□□□ 0.33
CTDSP1-203ENST00000431127 CREG2Q8IUH2 290 aa17.11■□□□□ 0.33
CTDSP1-203ENST00000431127 Q8N9G6 341 aaPredicted RBP17.11■□□□□ 0.33
CTDSP1-203ENST00000431127 PATE1Q8WXA2 126 aa17.11■□□□□ 0.33
CTDSP1-203ENST00000431127 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.11■□□□□ 0.33
CTDSP1-203ENST00000431127 CAPZA3Q96KX2 299 aa17.11■□□□□ 0.33
CTDSP1-203ENST00000431127 RUNDC3BQ96NL0 473 aa17.11■□□□□ 0.33
CTDSP1-203ENST00000431127 GFM1Q96RP9 751 aaKnown RBP17.11■□□□□ 0.33
CTDSP1-203ENST00000431127 TTC1Q99614 292 aa17.11■□□□□ 0.33
CTDSP1-203ENST00000431127 LRRN3Q9H3W5 708 aa17.11■□□□□ 0.33
CTDSP1-203ENST00000431127 ZDHHC3Q9NYG2 299 aa17.11■□□□□ 0.33
CTDSP1-203ENST00000431127 RABGEF1Q9UJ41 708 aa17.11■□□□□ 0.33
CTDSP1-203ENST00000431127 NEU2Q9Y3R4 380 aa17.11■□□□□ 0.33
CTDSP1-203ENST00000431127 AKAP13Q12802 2813 aa17.1■□□□□ 0.33
CTDSP1-203ENST00000431127 CCDC78A2IDD5 438 aa17.1■□□□□ 0.33
CTDSP1-203ENST00000431127 OR2AG2A6NM03 316 aa17.1■□□□□ 0.33
CTDSP1-203ENST00000431127 SRRM3A6NNA2 597 aaPredicted RBP17.1■□□□□ 0.33
CTDSP1-203ENST00000431127 NTN3O00634 580 aaPredicted RBP17.1■□□□□ 0.33
CTDSP1-203ENST00000431127 POP7O75817 140 aaKnown RBP17.1■□□□□ 0.33
CTDSP1-203ENST00000431127 RPLP0P05388 317 aaKnown RBP17.1■□□□□ 0.33
CTDSP1-203ENST00000431127 ACRV1P26436 265 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms