RNA–Protein interactions for RNA: ENST00000431020.1

LINC00309-201, long intergenic non-protein coding RNA 309, humanhuman

TSL 1 (best) BASIC

Gene LINC00309, Length 3,307 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00309-201ENST00000431020 PTRHD1Q6GMV3 140 aaKnown RBP5.9□□□□□ -1.47
LINC00309-201ENST00000431020 DHRS13Q6UX07 377 aa5.9□□□□□ -1.47
LINC00309-201ENST00000431020 TRIM48Q8IWZ4 208 aa5.9□□□□□ -1.47
LINC00309-201ENST00000431020 FBXO36Q8NEA4 188 aa5.9□□□□□ -1.47
LINC00309-201ENST00000431020 MAML1Q92585 1016 aa5.9□□□□□ -1.47
LINC00309-201ENST00000431020 ISG20Q96AZ6 181 aaKnown RBP5.9□□□□□ -1.47
LINC00309-201ENST00000431020 NACC2Q96BF6 587 aa5.9□□□□□ -1.47
LINC00309-201ENST00000431020 ELMO2Q96JJ3 720 aa5.9□□□□□ -1.47
LINC00309-201ENST00000431020 KLF6Q99612 283 aaPredicted RBP5.9□□□□□ -1.47
LINC00309-201ENST00000431020 C1QTNF7Q9BXJ2 289 aa5.9□□□□□ -1.47
LINC00309-201ENST00000431020 CCDC68Q9H2F9 335 aa5.9□□□□□ -1.47
LINC00309-201ENST00000431020 ACSS2Q9NR19 701 aa5.9□□□□□ -1.47
LINC00309-201ENST00000431020 PHPT1Q9NRX4 125 aaPredicted RBP5.9□□□□□ -1.47
LINC00309-201ENST00000431020 USP36Q9P275 1121 aaKnown RBP5.9□□□□□ -1.47
LINC00309-201ENST00000431020 PCYT1BQ9Y5K3 369 aaPredicted RBP5.9□□□□□ -1.47
LINC00309-201ENST00000431020 TLN1Q9Y490 2541 aaKnown RBP5.9□□□□□ -1.47
LINC00309-201ENST00000431020 ATMQ13315 3056 aa5.89□□□□□ -1.47
LINC00309-201ENST00000431020 C5orf60A6NFR6 353 aa5.89□□□□□ -1.47
LINC00309-201ENST00000431020 GOLGA8RI6L899 631 aa5.89□□□□□ -1.47
LINC00309-201ENST00000431020 AP2A1O95782 977 aa5.89□□□□□ -1.47
LINC00309-201ENST00000431020 GOT2P00505 430 aaKnown RBP5.89□□□□□ -1.47
LINC00309-201ENST00000431020 CTSCP53634 463 aa5.89□□□□□ -1.47
LINC00309-201ENST00000431020 MAZP56270 477 aaKnown RBP5.89□□□□□ -1.47
LINC00309-201ENST00000431020 RACK1P63244 317 aaKnown RBP5.89□□□□□ -1.47
LINC00309-201ENST00000431020 ZBTB16Q05516 673 aa5.89□□□□□ -1.47
LINC00309-201ENST00000431020 ABRQ12979 859 aa5.89□□□□□ -1.47
LINC00309-201ENST00000431020 MPP3Q13368 585 aa5.89□□□□□ -1.47
LINC00309-201ENST00000431020 XRCC4Q13426 336 aa5.89□□□□□ -1.47
LINC00309-201ENST00000431020 SLMAPQ14BN4 828 aa5.89□□□□□ -1.47
LINC00309-201ENST00000431020 ZNF789Q5FWF6 425 aa5.89□□□□□ -1.47
LINC00309-201ENST00000431020 IGDCC3Q8IVU1 814 aa5.89□□□□□ -1.47
LINC00309-201ENST00000431020 FAM20CQ8IXL6 584 aa5.89□□□□□ -1.47
LINC00309-201ENST00000431020 SLC22A18ASQ8N1D0 253 aa5.89□□□□□ -1.47
LINC00309-201ENST00000431020 OR1E3Q8WZA6 343 aa5.89□□□□□ -1.47
LINC00309-201ENST00000431020 MS4A3Q96HJ5 214 aa5.89□□□□□ -1.47
LINC00309-201ENST00000431020 PHF12Q96QT6 1004 aa5.89□□□□□ -1.47
LINC00309-201ENST00000431020 APOOQ9BUR5 198 aa5.89□□□□□ -1.47
LINC00309-201ENST00000431020 PRDM8Q9NQV8 689 aa5.89□□□□□ -1.47
LINC00309-201ENST00000431020 MARCH4Q9P2E8 410 aaPredicted RBP5.89□□□□□ -1.47
LINC00309-201ENST00000431020 PNMA8BQ9ULN7 279 aaPredicted RBP5.89□□□□□ -1.47
LINC00309-201ENST00000431020 SLC6A14Q9UN76 642 aa5.89□□□□□ -1.47
LINC00309-201ENST00000431020 OAS3Q9Y6K5 1087 aaKnown RBP5.89□□□□□ -1.47
LINC00309-201ENST00000431020 ZFHX4Q86UP3 3567 aa5.89□□□□□ -1.47
LINC00309-201ENST00000431020 CAPN8A6NHC0 703 aa5.89□□□□□ -1.47
LINC00309-201ENST00000431020 NCF1BA6NI72 391 aaPredicted RBP5.89□□□□□ -1.47
LINC00309-201ENST00000431020 NCF1CA8MVU1 366 aaPredicted RBP5.89□□□□□ -1.47
LINC00309-201ENST00000431020 DYNC1I1O14576 645 aa5.89□□□□□ -1.47
LINC00309-201ENST00000431020 RASSF9O75901 435 aa5.89□□□□□ -1.47
LINC00309-201ENST00000431020 FAM155BO75949 473 aa5.89□□□□□ -1.47
LINC00309-201ENST00000431020 FGF1P05230 155 aa5.89□□□□□ -1.47
LINC00309-201ENST00000431020 ATXN1LP0C7T5 689 aaKnown RBP5.89□□□□□ -1.47
LINC00309-201ENST00000431020 NCF1P14598 390 aaPredicted RBP5.89□□□□□ -1.47
LINC00309-201ENST00000431020 ITGALP20701 1170 aa5.89□□□□□ -1.47
LINC00309-201ENST00000431020 MPP1Q00013 466 aa5.89□□□□□ -1.47
LINC00309-201ENST00000431020 ILF3Q12906 894 aaKnown RBP eCLIP5.89□□□□□ -1.47
LINC00309-201ENST00000431020 RALGDSQ12967 914 aa5.89□□□□□ -1.47
LINC00309-201ENST00000431020 GTF2H3Q13889 308 aa5.89□□□□□ -1.47
LINC00309-201ENST00000431020 NFE2L1Q14494 772 aa5.89□□□□□ -1.47
LINC00309-201ENST00000431020 ZNF460Q14592 562 aa5.89□□□□□ -1.47
LINC00309-201ENST00000431020 NKAIN2Q5VXU1 208 aa5.89□□□□□ -1.47
LINC00309-201ENST00000431020 PNCKQ6P2M8 343 aa5.89□□□□□ -1.47
LINC00309-201ENST00000431020 KDELC1Q6UW63 502 aa5.89□□□□□ -1.47
LINC00309-201ENST00000431020 RANBP10Q6VN20 620 aa5.89□□□□□ -1.47
LINC00309-201ENST00000431020 C3orf62Q6ZUJ4 267 aa5.89□□□□□ -1.47
LINC00309-201ENST00000431020 SERPINA9Q86WD7 417 aa5.89□□□□□ -1.47
LINC00309-201ENST00000431020 GALNT13Q8IUC8 556 aa5.89□□□□□ -1.47
LINC00309-201ENST00000431020 SUMF1Q8NBK3 374 aa5.89□□□□□ -1.47
LINC00309-201ENST00000431020 RCBTB1Q8NDN9 531 aa5.89□□□□□ -1.47
LINC00309-201ENST00000431020 CASKIN2Q8WXE0 1202 aa5.89□□□□□ -1.47
LINC00309-201ENST00000431020 CDKN2AIPNLQ96HQ2 116 aa5.89□□□□□ -1.47
LINC00309-201ENST00000431020 CPEB1Q9BZB8 566 aaKnown RBP5.89□□□□□ -1.47
LINC00309-201ENST00000431020 HOMER3Q9NSC5 361 aa5.89□□□□□ -1.47
LINC00309-201ENST00000431020 CUEDC1Q9NWM3 386 aaPredicted RBP5.89□□□□□ -1.47
LINC00309-201ENST00000431020 PLAGL1Q9UM63 463 aa5.89□□□□□ -1.47
LINC00309-201ENST00000431020 MRFAP1Q9Y605 127 aa5.89□□□□□ -1.47
LINC00309-201ENST00000431020 PTPRQQ9UMZ3 2332 aa5.89□□□□□ -1.47
LINC00309-201ENST00000431020 SDK2Q58EX2 2172 aa5.89□□□□□ -1.47
LINC00309-201ENST00000431020 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.89□□□□□ -1.47
LINC00309-201ENST00000431020 ARHGAP33O14559 1287 aa5.89□□□□□ -1.47
LINC00309-201ENST00000431020 SOCS5O75159 536 aa5.89□□□□□ -1.47
LINC00309-201ENST00000431020 SRP72O76094 671 aaKnown RBP5.89□□□□□ -1.47
LINC00309-201ENST00000431020 STATHP02808 62 aa5.89□□□□□ -1.47
LINC00309-201ENST00000431020 FUCA1P04066 466 aa5.89□□□□□ -1.47
LINC00309-201ENST00000431020 HLA-DPA1P20036 260 aa5.89□□□□□ -1.47
LINC00309-201ENST00000431020 GRIA4P48058 902 aa5.89□□□□□ -1.47
LINC00309-201ENST00000431020 SEPHS1P49903 392 aa5.89□□□□□ -1.47
LINC00309-201ENST00000431020 CLCNKAP51800 687 aa5.89□□□□□ -1.47
LINC00309-201ENST00000431020 CDK3Q00526 305 aa5.89□□□□□ -1.47
LINC00309-201ENST00000431020 SF3A3Q12874 501 aaKnown RBP eCLIP5.89□□□□□ -1.47
LINC00309-201ENST00000431020 TMEM115Q12893 351 aaPredicted RBP5.89□□□□□ -1.47
LINC00309-201ENST00000431020 BMPR2Q13873 1038 aa5.89□□□□□ -1.47
LINC00309-201ENST00000431020 GRM3Q14832 879 aa5.89□□□□□ -1.47
LINC00309-201ENST00000431020 DUOXA1Q1HG43 343 aa5.89□□□□□ -1.47
LINC00309-201ENST00000431020 HSF5Q4G112 596 aaPredicted RBP5.89□□□□□ -1.47
LINC00309-201ENST00000431020 GPRC6AQ5T6X5 926 aa5.89□□□□□ -1.47
LINC00309-201ENST00000431020 STPG1Q5TH74 334 aa5.89□□□□□ -1.47
LINC00309-201ENST00000431020 FAAH2Q6GMR7 532 aa5.89□□□□□ -1.47
LINC00309-201ENST00000431020 FBXO38Q6PIJ6 1188 aa5.89□□□□□ -1.47
LINC00309-201ENST00000431020 USP30Q70CQ3 517 aa5.89□□□□□ -1.47
LINC00309-201ENST00000431020 PPIL6Q8IXY8 311 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 143 ms