RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 DLGAP3O95886 979 aa12.81□□□□□ -0.36
PTCH1-207ENST00000429896 GKP32189 559 aa12.81□□□□□ -0.36
PTCH1-207ENST00000429896 DPYSQ14117 519 aa12.81□□□□□ -0.36
PTCH1-207ENST00000429896 TRIM25Q14258 630 aaKnown RBP12.81□□□□□ -0.36
PTCH1-207ENST00000429896 KCTD19Q17RG1 926 aaPredicted RBP12.81□□□□□ -0.36
PTCH1-207ENST00000429896 DPY19L3Q6ZPD9 716 aa12.81□□□□□ -0.36
PTCH1-207ENST00000429896 LDB1Q86U70 411 aaPredicted RBP12.81□□□□□ -0.36
PTCH1-207ENST00000429896 PHC3Q8NDX5 983 aa12.81□□□□□ -0.36
PTCH1-207ENST00000429896 NCDNQ9UBB6 729 aa12.81□□□□□ -0.36
PTCH1-207ENST00000429896 URADA6NGE7 173 aa12.81□□□□□ -0.36
PTCH1-207ENST00000429896 TMEM114B3SHH9 223 aa12.81□□□□□ -0.36
PTCH1-207ENST00000429896 KRT16P08779 473 aa12.81□□□□□ -0.36
PTCH1-207ENST00000429896 SLC1A6P48664 564 aa12.81□□□□□ -0.36
PTCH1-207ENST00000429896 CNTN1Q12860 1018 aa12.81□□□□□ -0.36
PTCH1-207ENST00000429896 CAPRIN2Q6IMN6 1127 aaKnown RBP12.81□□□□□ -0.36
PTCH1-207ENST00000429896 MPP5Q8N3R9 675 aa12.81□□□□□ -0.36
PTCH1-207ENST00000429896 MREGQ8N565 214 aa12.81□□□□□ -0.36
PTCH1-207ENST00000429896 OR52K2Q8NGK3 314 aa12.81□□□□□ -0.36
PTCH1-207ENST00000429896 RPLP0P6Q8NHW5 317 aa12.81□□□□□ -0.36
PTCH1-207ENST00000429896 ACMSDQ8TDX5 336 aa12.81□□□□□ -0.36
PTCH1-207ENST00000429896 NXPE3Q969Y0 559 aa12.81□□□□□ -0.36
PTCH1-207ENST00000429896 PRICKLE1Q96MT3 831 aaPredicted RBP12.81□□□□□ -0.36
PTCH1-207ENST00000429896 QRFPRQ96P65 431 aa12.81□□□□□ -0.36
PTCH1-207ENST00000429896 SLC38A3Q99624 504 aa12.81□□□□□ -0.36
PTCH1-207ENST00000429896 CLDN7O95471 211 aa12.81□□□□□ -0.36
PTCH1-207ENST00000429896 FYNP06241 537 aa12.81□□□□□ -0.36
PTCH1-207ENST00000429896 ANXA11P50995 505 aaKnown RBP12.81□□□□□ -0.36
PTCH1-207ENST00000429896 RPS21P63220 83 aaKnown RBP12.81□□□□□ -0.36
PTCH1-207ENST00000429896 RGS1Q08116 209 aa12.81□□□□□ -0.36
PTCH1-207ENST00000429896 MSLNQ13421 630 aaPredicted RBP12.81□□□□□ -0.36
PTCH1-207ENST00000429896 SMAD4Q13485 552 aaKnown RBP12.81□□□□□ -0.36
PTCH1-207ENST00000429896 TDGQ13569 410 aa12.81□□□□□ -0.36
PTCH1-207ENST00000429896 DDI2Q5TDH0 399 aa12.81□□□□□ -0.36
PTCH1-207ENST00000429896 RALGPS2Q86X27 583 aaPredicted RBP12.81□□□□□ -0.36
PTCH1-207ENST00000429896 OR2T3Q8NH03 318 aa12.81□□□□□ -0.36
PTCH1-207ENST00000429896 DEPDC7Q96QD5 511 aa12.81□□□□□ -0.36
PTCH1-207ENST00000429896 IMPAD1Q9NX62 359 aa12.81□□□□□ -0.36
PTCH1-207ENST00000429896 CORO1CQ9ULV4 474 aaPredicted RBP12.81□□□□□ -0.36
PTCH1-207ENST00000429896 INVSQ9Y283 1065 aa12.81□□□□□ -0.36
PTCH1-207ENST00000429896 F11P03951 625 aa12.81□□□□□ -0.36
PTCH1-207ENST00000429896 HOXC8P31273 242 aa12.81□□□□□ -0.36
PTCH1-207ENST00000429896 CENPIQ92674 756 aaPredicted RBP12.81□□□□□ -0.36
PTCH1-207ENST00000429896 MYRFLQ96LU7 910 aa12.81□□□□□ -0.36
PTCH1-207ENST00000429896 NPEPPSL1A6NEC2 478 aa12.8□□□□□ -0.36
PTCH1-207ENST00000429896 E9PBE3 544 aa12.8□□□□□ -0.36
PTCH1-207ENST00000429896 TSPAN6O43657 245 aa12.8□□□□□ -0.36
PTCH1-207ENST00000429896 NUDT14O95848 222 aa12.8□□□□□ -0.36
PTCH1-207ENST00000429896 ATP6V1B2P21281 511 aa12.8□□□□□ -0.36
PTCH1-207ENST00000429896 RUNX1T1Q06455 604 aa12.8□□□□□ -0.36
PTCH1-207ENST00000429896 KIAA0930Q6ICG6 404 aaPredicted RBP12.8□□□□□ -0.36
PTCH1-207ENST00000429896 TANGO2Q6ICL3 276 aa12.8□□□□□ -0.36
PTCH1-207ENST00000429896 INTS10Q9NVR2 710 aaKnown RBP12.8□□□□□ -0.36
PTCH1-207ENST00000429896 PSMD13Q9UNM6 376 aa12.8□□□□□ -0.36
PTCH1-207ENST00000429896 YBX2Q9Y2T7 364 aaKnown RBP12.8□□□□□ -0.36
PTCH1-207ENST00000429896 ESR1P03372 595 aa12.8□□□□□ -0.36
PTCH1-207ENST00000429896 GALK1P51570 392 aa12.8□□□□□ -0.36
PTCH1-207ENST00000429896 CAPN13Q6MZZ7 669 aaPredicted RBP12.8□□□□□ -0.36
PTCH1-207ENST00000429896 KIAA0408Q6ZU52 694 aa12.8□□□□□ -0.36
PTCH1-207ENST00000429896 AMZ2Q86W34 360 aa12.8□□□□□ -0.36
PTCH1-207ENST00000429896 OR13C4Q8NGS5 318 aa12.8□□□□□ -0.36
PTCH1-207ENST00000429896 GPR21Q99679 349 aa12.8□□□□□ -0.36
PTCH1-207ENST00000429896 RHBGQ9H310 441 aa12.8□□□□□ -0.36
PTCH1-207ENST00000429896 SCN3BQ9NY72 215 aa12.8□□□□□ -0.36
PTCH1-207ENST00000429896 POLG2Q9UHN1 485 aa12.8□□□□□ -0.36
PTCH1-207ENST00000429896 ATP6V1HQ9UI12 483 aa12.8□□□□□ -0.36
PTCH1-207ENST00000429896 SNX6Q9UNH7 406 aa12.8□□□□□ -0.36
PTCH1-207ENST00000429896 PGLSO95336 258 aa12.8□□□□□ -0.36
PTCH1-207ENST00000429896 CYP17A1P05093 508 aa12.8□□□□□ -0.36
PTCH1-207ENST00000429896 ATP5F1P24539 256 aaPredicted RBP12.8□□□□□ -0.36
PTCH1-207ENST00000429896 XKR6Q5GH73 641 aa12.8□□□□□ -0.36
PTCH1-207ENST00000429896 CCDC103Q8IW40 242 aa12.8□□□□□ -0.36
PTCH1-207ENST00000429896 TCAIMQ8N3R3 496 aa12.8□□□□□ -0.36
PTCH1-207ENST00000429896 SPATA6LQ8N4H0 392 aa12.8□□□□□ -0.36
PTCH1-207ENST00000429896 KLHDC7BQ96G42 594 aa12.8□□□□□ -0.36
PTCH1-207ENST00000429896 GPR174Q9BXC1 333 aa12.8□□□□□ -0.36
PTCH1-207ENST00000429896 GID8Q9NWU2 228 aa12.8□□□□□ -0.36
PTCH1-207ENST00000429896 MYH9P35579 1960 aaKnown RBP12.8□□□□□ -0.36
PTCH1-207ENST00000429896 GUCY1B2O75343 617 aa12.8□□□□□ -0.36
PTCH1-207ENST00000429896 CDH2P19022 906 aaPredicted RBP12.8□□□□□ -0.36
PTCH1-207ENST00000429896 ATP6V1C1P21283 382 aa12.8□□□□□ -0.36
PTCH1-207ENST00000429896 C5AR1P21730 350 aa12.8□□□□□ -0.36
PTCH1-207ENST00000429896 SLC44A4Q53GD3 710 aa12.8□□□□□ -0.36
PTCH1-207ENST00000429896 MICU2Q8IYU8 434 aa12.8□□□□□ -0.36
PTCH1-207ENST00000429896 OLFM3Q96PB7 478 aa12.8□□□□□ -0.36
PTCH1-207ENST00000429896 PHF7Q9BWX1 381 aaPredicted RBP12.8□□□□□ -0.36
PTCH1-207ENST00000429896 CAB39LQ9H9S4 337 aa12.8□□□□□ -0.36
PTCH1-207ENST00000429896 SIRPGQ9P1W8 387 aa12.8□□□□□ -0.36
PTCH1-207ENST00000429896 RABGEF1Q9UJ41 708 aa12.8□□□□□ -0.36
PTCH1-207ENST00000429896 M0R3G1 203 aa12.8□□□□□ -0.36
PTCH1-207ENST00000429896 ZNF23P17027 643 aa12.8□□□□□ -0.36
PTCH1-207ENST00000429896 ACTR1BP42025 376 aa12.8□□□□□ -0.36
PTCH1-207ENST00000429896 ACTR1AP61163 376 aa12.8□□□□□ -0.36
PTCH1-207ENST00000429896 HTRA4P83105 476 aaPredicted RBP12.8□□□□□ -0.36
PTCH1-207ENST00000429896 MPP1Q00013 466 aa12.8□□□□□ -0.36
PTCH1-207ENST00000429896 CST6Q15828 149 aa12.8□□□□□ -0.36
PTCH1-207ENST00000429896 C16orf46Q6P387 395 aa12.8□□□□□ -0.36
PTCH1-207ENST00000429896 TRPC4APQ8TEL6 797 aa12.8□□□□□ -0.36
PTCH1-207ENST00000429896 LRRC4CQ9HCJ2 640 aa12.8□□□□□ -0.36
PTCH1-207ENST00000429896 ZDHHC3Q9NYG2 299 aa12.8□□□□□ -0.36
PTCH1-207ENST00000429896 B4GALT6Q9UBX8 382 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms