RNA–Protein interactions for RNA: ENST00000429544.6

MBD4-203, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD4, Length 2,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-203ENST00000429544 KLC1Q07866 573 aa16.05■□□□□ 0.16
MBD4-203ENST00000429544 NFATC2Q13469 925 aa16.05■□□□□ 0.16
MBD4-203ENST00000429544 TRIP10Q15642 601 aa16.05■□□□□ 0.16
MBD4-203ENST00000429544 CDKN3Q16667 212 aa16.05■□□□□ 0.16
MBD4-203ENST00000429544 IRGCQ6NXR0 463 aa16.05■□□□□ 0.16
MBD4-203ENST00000429544 SNX20Q7Z614 316 aa16.05■□□□□ 0.16
MBD4-203ENST00000429544 GRIN3AQ8TCU5 1115 aa16.05■□□□□ 0.16
MBD4-203ENST00000429544 IL26Q9NPH9 171 aa16.05■□□□□ 0.16
MBD4-203ENST00000429544 TMCO1Q9UM00 188 aa16.05■□□□□ 0.16
MBD4-203ENST00000429544 LBPP18428 481 aa16.05■□□□□ 0.16
MBD4-203ENST00000429544 GJA8P48165 433 aa16.05■□□□□ 0.16
MBD4-203ENST00000429544 TGFBIQ15582 683 aa16.05■□□□□ 0.16
MBD4-203ENST00000429544 CHRNA6Q15825 494 aa16.05■□□□□ 0.16
MBD4-203ENST00000429544 PLPP4Q5VZY2 271 aa16.05■□□□□ 0.16
MBD4-203ENST00000429544 FRA10AC1Q70Z53 315 aa16.05■□□□□ 0.16
MBD4-203ENST00000429544 METTL3Q86U44 580 aaKnown RBP16.05■□□□□ 0.16
MBD4-203ENST00000429544 RBFAQ8N0V3 343 aa16.05■□□□□ 0.16
MBD4-203ENST00000429544 OR56A4Q8NGH8 313 aa16.05■□□□□ 0.16
MBD4-203ENST00000429544 RIN3Q8TB24 985 aa16.05■□□□□ 0.16
MBD4-203ENST00000429544 TCEAL4Q96EI5 215 aa16.05■□□□□ 0.16
MBD4-203ENST00000429544 LMLNQ96KR4 655 aa16.05■□□□□ 0.16
MBD4-203ENST00000429544 TCF25Q9BQ70 676 aa16.05■□□□□ 0.16
MBD4-203ENST00000429544 C17orf80Q9BSJ5 609 aa16.05■□□□□ 0.16
MBD4-203ENST00000429544 CIPCQ9C0C6 399 aa16.05■□□□□ 0.16
MBD4-203ENST00000429544 TLR9Q9NR96 1032 aa16.05■□□□□ 0.16
MBD4-203ENST00000429544 NUDT4Q9NZJ9 180 aa16.05■□□□□ 0.16
MBD4-203ENST00000429544 GNPTGQ9UJJ9 305 aa16.05■□□□□ 0.16
MBD4-203ENST00000429544 ZNF225Q9UK10 706 aa16.05■□□□□ 0.16
MBD4-203ENST00000429544 MTCL1Q9Y4B5 1905 aaKnown RBP16.05■□□□□ 0.16
MBD4-203ENST00000429544 PIKFYVEQ9Y2I7 2098 aa16.05■□□□□ 0.16
MBD4-203ENST00000429544 GLYATL1P3A0A0U1RQE8 302 aa16.04■□□□□ 0.16
MBD4-203ENST00000429544 NPIPB15A6NHN6 443 aaPredicted RBP16.04■□□□□ 0.16
MBD4-203ENST00000429544 GOLGA8CPA6NN73 597 aa16.04■□□□□ 0.16
MBD4-203ENST00000429544 LIN7AO14910 233 aaPredicted RBP16.04■□□□□ 0.16
MBD4-203ENST00000429544 BCAS2O75934 225 aaPredicted RBP16.04■□□□□ 0.16
MBD4-203ENST00000429544 ESRRBO95718 433 aa16.04■□□□□ 0.16
MBD4-203ENST00000429544 MLYCDO95822 493 aa16.04■□□□□ 0.16
MBD4-203ENST00000429544 GLUD1P00367 558 aa16.04■□□□□ 0.16
MBD4-203ENST00000429544 HGFP14210 728 aa16.04■□□□□ 0.16
MBD4-203ENST00000429544 RPS3P23396 243 aaKnown RBP eCLIP16.04■□□□□ 0.16
MBD4-203ENST00000429544 HLA-FP30511 346 aa16.04■□□□□ 0.16
MBD4-203ENST00000429544 ACADVLP49748 655 aa16.04■□□□□ 0.16
MBD4-203ENST00000429544 ERVFC1P60507 584 aa16.04■□□□□ 0.16
MBD4-203ENST00000429544 C18orf21Q32NC0 220 aaPredicted RBP16.04■□□□□ 0.16
MBD4-203ENST00000429544 FUT11Q495W5 492 aa16.04■□□□□ 0.16
MBD4-203ENST00000429544 C22orf39Q6P5X5 142 aa16.04■□□□□ 0.16
MBD4-203ENST00000429544 SCIMPQ6UWF3 145 aa16.04■□□□□ 0.16
MBD4-203ENST00000429544 MIER2Q8N344 545 aa16.04■□□□□ 0.16
MBD4-203ENST00000429544 CLDN19Q8N6F1 224 aa16.04■□□□□ 0.16
MBD4-203ENST00000429544 ZNF784Q8NCA9 323 aaPredicted RBP16.04■□□□□ 0.16
MBD4-203ENST00000429544 IL23AQ9NPF7 189 aa16.04■□□□□ 0.16
MBD4-203ENST00000429544 BCAP29Q9UHQ4 241 aa16.04■□□□□ 0.16
MBD4-203ENST00000429544 CRLS1Q9UJA2 301 aa16.04■□□□□ 0.16
MBD4-203ENST00000429544 APPL1Q9UKG1 709 aa16.04■□□□□ 0.16
MBD4-203ENST00000429544 SARDHQ9UL12 918 aa16.04■□□□□ 0.16
MBD4-203ENST00000429544 PSMD13Q9UNM6 376 aa16.04■□□□□ 0.16
MBD4-203ENST00000429544 HIDE1A8MVS5 230 aa16.04■□□□□ 0.16
MBD4-203ENST00000429544 C9JVG2 144 aa16.04■□□□□ 0.16
MBD4-203ENST00000429544 E2F3O00716 465 aa16.04■□□□□ 0.16
MBD4-203ENST00000429544 ACRV1P26436 265 aa16.04■□□□□ 0.16
MBD4-203ENST00000429544 SPAM1P38567 509 aa16.04■□□□□ 0.16
MBD4-203ENST00000429544 NAA20P61599 178 aa16.04■□□□□ 0.16
MBD4-203ENST00000429544 SNRPD1P62314 119 aaKnown RBP16.04■□□□□ 0.16
MBD4-203ENST00000429544 RALGDSQ12967 914 aa16.04■□□□□ 0.16
MBD4-203ENST00000429544 GPRIN3Q6ZVF9 776 aa16.04■□□□□ 0.16
MBD4-203ENST00000429544 DCBLD1Q8N8Z6 715 aa16.04■□□□□ 0.16
MBD4-203ENST00000429544 NUSAP1Q9BXS6 441 aaKnown RBP16.04■□□□□ 0.16
MBD4-203ENST00000429544 KLHL4Q9C0H6 718 aa16.04■□□□□ 0.16
MBD4-203ENST00000429544 VCX3BQ9H321 246 aa16.04■□□□□ 0.16
MBD4-203ENST00000429544 CXorf56Q9H5V9 222 aa16.04■□□□□ 0.16
MBD4-203ENST00000429544 KIAA0100Q14667 2235 aaKnown RBP16.04■□□□□ 0.16
MBD4-203ENST00000429544 ACOT8O14734 319 aa16.03■□□□□ 0.16
MBD4-203ENST00000429544 TRIM16O95361 564 aa16.03■□□□□ 0.16
MBD4-203ENST00000429544 UROSP10746 265 aa16.03■□□□□ 0.16
MBD4-203ENST00000429544 SFT2D3Q587I9 215 aa16.03■□□□□ 0.16
MBD4-203ENST00000429544 ASTLQ6HA08 431 aaPredicted RBP16.03■□□□□ 0.16
MBD4-203ENST00000429544 TMEM25Q86YD3 366 aa16.03■□□□□ 0.16
MBD4-203ENST00000429544 PQLC1Q8N2U9 271 aa16.03■□□□□ 0.16
MBD4-203ENST00000429544 MICAL1Q8TDZ2 1067 aa16.03■□□□□ 0.16
MBD4-203ENST00000429544 PDLIM5Q96HC4 596 aaKnown RBP16.03■□□□□ 0.16
MBD4-203ENST00000429544 SLC45A3Q96JT2 553 aa16.03■□□□□ 0.16
MBD4-203ENST00000429544 EMILIN2Q9BXX0 1053 aa16.03■□□□□ 0.16
MBD4-203ENST00000429544 CROTQ9UKG9 612 aa16.03■□□□□ 0.16
MBD4-203ENST00000429544 SLC4A7Q9Y6M7 1214 aa16.03■□□□□ 0.16
MBD4-203ENST00000429544 PLXNB3Q9ULL4 1909 aa16.03■□□□□ 0.16
MBD4-203ENST00000429544 TRBV5-4A0A0C4DH59 114 aa16.03■□□□□ 0.16
MBD4-203ENST00000429544 GIPC1O14908 333 aa16.03■□□□□ 0.16
MBD4-203ENST00000429544 VPS4BO75351 444 aa16.03■□□□□ 0.16
MBD4-203ENST00000429544 OR4F21O95013 312 aa16.03■□□□□ 0.16
MBD4-203ENST00000429544 SLC25A14O95258 325 aaPredicted RBP16.03■□□□□ 0.16
MBD4-203ENST00000429544 CHEK2O96017 543 aa16.03■□□□□ 0.16
MBD4-203ENST00000429544 HTRA4P83105 476 aaPredicted RBP16.03■□□□□ 0.16
MBD4-203ENST00000429544 MYLK3Q32MK0 819 aa16.03■□□□□ 0.16
MBD4-203ENST00000429544 SBSNQ6UWP8 590 aa16.03■□□□□ 0.16
MBD4-203ENST00000429544 ADAMTSL2Q86TH1 951 aa16.03■□□□□ 0.16
MBD4-203ENST00000429544 PDSS2Q86YH6 399 aa16.03■□□□□ 0.16
MBD4-203ENST00000429544 SLC39A3Q9BRY0 314 aa16.03■□□□□ 0.16
MBD4-203ENST00000429544 ZDHHC6Q9H6R6 413 aa16.03■□□□□ 0.16
MBD4-203ENST00000429544 NEDD8-MDP1E9PL57 170 aa16.02■□□□□ 0.16
MBD4-203ENST00000429544 RFPL2O75678 378 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms