RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 HEBP1Q9NRV9 189 aa11.34□□□□□ -0.59
CECR3-201ENST00000428828 SEPT10Q9P0V9 454 aa11.34□□□□□ -0.59
CECR3-201ENST00000428828 N6AMT1Q9Y5N5 214 aa11.34□□□□□ -0.59
CECR3-201ENST00000428828 ILVBLA1L0T0 632 aa11.33□□□□□ -0.6
CECR3-201ENST00000428828 GOLGA8RI6L899 631 aa11.33□□□□□ -0.6
CECR3-201ENST00000428828 RNF103O00237 685 aa11.33□□□□□ -0.6
CECR3-201ENST00000428828 CBX4O00257 560 aa11.33□□□□□ -0.6
CECR3-201ENST00000428828 BCAS2O75934 225 aaPredicted RBP11.33□□□□□ -0.6
CECR3-201ENST00000428828 INHBAP08476 426 aa11.33□□□□□ -0.6
CECR3-201ENST00000428828 GARSP41250 739 aaKnown RBP11.33□□□□□ -0.6
CECR3-201ENST00000428828 NR2C2P49116 596 aa11.33□□□□□ -0.6
CECR3-201ENST00000428828 MESP2Q0VG99 397 aa11.33□□□□□ -0.6
CECR3-201ENST00000428828 TDGQ13569 410 aa11.33□□□□□ -0.6
CECR3-201ENST00000428828 PDE1CQ14123 709 aaPredicted RBP11.33□□□□□ -0.6
CECR3-201ENST00000428828 PTK2BQ14289 1009 aa11.33□□□□□ -0.6
CECR3-201ENST00000428828 ZNF846Q147U1 533 aa11.33□□□□□ -0.6
CECR3-201ENST00000428828 PARP15Q460N3 678 aa11.33□□□□□ -0.6
CECR3-201ENST00000428828 IER5LQ5T953 404 aa11.33□□□□□ -0.6
CECR3-201ENST00000428828 DARS2Q6PI48 645 aaKnown RBP11.33□□□□□ -0.6
CECR3-201ENST00000428828 TTC30BQ8N4P2 665 aa11.33□□□□□ -0.6
CECR3-201ENST00000428828 PACRGLQ8N7B6 248 aa11.33□□□□□ -0.6
CECR3-201ENST00000428828 TANKQ92844 425 aa11.33□□□□□ -0.6
CECR3-201ENST00000428828 ACDQ96AP0 544 aa11.33□□□□□ -0.6
CECR3-201ENST00000428828 DUS3LQ96G46 650 aaKnown RBP11.33□□□□□ -0.6
CECR3-201ENST00000428828 PKP2Q99959 881 aa11.33□□□□□ -0.6
CECR3-201ENST00000428828 DCUN1D5Q9BTE7 237 aa11.33□□□□□ -0.6
CECR3-201ENST00000428828 YTHDF1Q9BYJ9 559 aaKnown RBP11.33□□□□□ -0.6
CECR3-201ENST00000428828 CEP41Q9BYV8 373 aa11.33□□□□□ -0.6
CECR3-201ENST00000428828 XAB2Q9HCS7 855 aaKnown RBP11.33□□□□□ -0.6
CECR3-201ENST00000428828 ACTL7AQ9Y615 435 aa11.33□□□□□ -0.6
CECR3-201ENST00000428828 LOC105371267A0A1B0GV96 52 aa11.33□□□□□ -0.6
CECR3-201ENST00000428828 J3KR12 359 aa11.33□□□□□ -0.6
CECR3-201ENST00000428828 NOL3O60936 208 aaKnown RBP11.33□□□□□ -0.6
CECR3-201ENST00000428828 KRT37O76014 449 aa11.33□□□□□ -0.6
CECR3-201ENST00000428828 KRT6AP02538 564 aa11.33□□□□□ -0.6
CECR3-201ENST00000428828 KRT6BP04259 564 aa11.33□□□□□ -0.6
CECR3-201ENST00000428828 NTRK1P04629 796 aa11.33□□□□□ -0.6
CECR3-201ENST00000428828 SNRPAP09012 282 aaKnown RBP11.33□□□□□ -0.6
CECR3-201ENST00000428828 MX2P20592 715 aa11.33□□□□□ -0.6
CECR3-201ENST00000428828 SSTR1P30872 391 aa11.33□□□□□ -0.6
CECR3-201ENST00000428828 FLOT2Q14254 428 aa11.33□□□□□ -0.6
CECR3-201ENST00000428828 SF3B4Q15427 424 aaKnown RBP eCLIP11.33□□□□□ -0.6
CECR3-201ENST00000428828 GEN1Q17RS7 908 aa11.33□□□□□ -0.6
CECR3-201ENST00000428828 FUT11Q495W5 492 aa11.33□□□□□ -0.6
CECR3-201ENST00000428828 TIGD2Q4W5G0 525 aa11.33□□□□□ -0.6
CECR3-201ENST00000428828 PIGGQ5H8A4 983 aa11.33□□□□□ -0.6
CECR3-201ENST00000428828 WDR45BQ5MNZ6 344 aa11.33□□□□□ -0.6
CECR3-201ENST00000428828 AFMIDQ63HM1 303 aa11.33□□□□□ -0.6
CECR3-201ENST00000428828 LINGO4Q6UY18 593 aa11.33□□□□□ -0.6
CECR3-201ENST00000428828 PRR23CQ6ZRP0 262 aa11.33□□□□□ -0.6
CECR3-201ENST00000428828 IGFN1Q86VF2 1251 aa11.33□□□□□ -0.6
CECR3-201ENST00000428828 SLC26A11Q86WA9 606 aa11.33□□□□□ -0.6
CECR3-201ENST00000428828 DCP2Q8IU60 420 aaKnown RBP11.33□□□□□ -0.6
CECR3-201ENST00000428828 ETFBKMTQ8IXQ9 262 aa11.33□□□□□ -0.6
CECR3-201ENST00000428828 PALM2Q8IXS6 379 aa11.33□□□□□ -0.6
CECR3-201ENST00000428828 SLC15A4Q8N697 577 aa11.33□□□□□ -0.6
CECR3-201ENST00000428828 NAT8LQ8N9F0 302 aa11.33□□□□□ -0.6
CECR3-201ENST00000428828 HIPK4Q8NE63 616 aa11.33□□□□□ -0.6
CECR3-201ENST00000428828 PNPT1Q8TCS8 783 aaKnown RBP11.33□□□□□ -0.6
CECR3-201ENST00000428828 CHAC2Q8WUX2 184 aa11.33□□□□□ -0.6
CECR3-201ENST00000428828 CHFRQ96EP1 664 aa11.33□□□□□ -0.6
CECR3-201ENST00000428828 ASB2Q96Q27 587 aa11.33□□□□□ -0.6
CECR3-201ENST00000428828 UHRF1Q96T88 793 aaPredicted RBP11.33□□□□□ -0.6
CECR3-201ENST00000428828 EBF4Q9BQW3 602 aa11.33□□□□□ -0.6
CECR3-201ENST00000428828 FEM1AQ9BSK4 669 aa11.33□□□□□ -0.6
CECR3-201ENST00000428828 TMEM121Q9BTD3 319 aa11.33□□□□□ -0.6
CECR3-201ENST00000428828 NPLQ9BXD5 320 aaPredicted RBP11.33□□□□□ -0.6
CECR3-201ENST00000428828 WDR12Q9GZL7 423 aaKnown RBP11.33□□□□□ -0.6
CECR3-201ENST00000428828 MAGEH1Q9H213 219 aa11.33□□□□□ -0.6
CECR3-201ENST00000428828 ARMC1Q9NVT9 282 aa11.33□□□□□ -0.6
CECR3-201ENST00000428828 DEC1Q9P2X7 70 aa11.33□□□□□ -0.6
CECR3-201ENST00000428828 PIAS3Q9Y6X2 628 aa11.33□□□□□ -0.6
CECR3-201ENST00000428828 VCANP13611 3396 aa11.32□□□□□ -0.6
CECR3-201ENST00000428828 MUC22E2RYF6 1773 aaPredicted RBP11.32□□□□□ -0.6
CECR3-201ENST00000428828 A0A1B0GTW7 788 aa11.32□□□□□ -0.6
CECR3-201ENST00000428828 C7orf72A4D263 438 aa11.32□□□□□ -0.6
CECR3-201ENST00000428828 GOLGA8MH3BSY2 632 aa11.32□□□□□ -0.6
CECR3-201ENST00000428828 CLOCKO15516 846 aa11.32□□□□□ -0.6
CECR3-201ENST00000428828 SCO2O43819 266 aa11.32□□□□□ -0.6
CECR3-201ENST00000428828 MTRF1O75570 445 aaKnown RBP11.32□□□□□ -0.6
CECR3-201ENST00000428828 CLPXO76031 633 aa11.32□□□□□ -0.6
CECR3-201ENST00000428828 SORBS2O94875 1100 aaKnown RBP11.32□□□□□ -0.6
CECR3-201ENST00000428828 COX4I1P13073 169 aa11.32□□□□□ -0.6
CECR3-201ENST00000428828 M6PRP20645 277 aa11.32□□□□□ -0.6
CECR3-201ENST00000428828 TCEA1P23193 301 aaKnown RBP11.32□□□□□ -0.6
CECR3-201ENST00000428828 RBL1P28749 1068 aa11.32□□□□□ -0.6
CECR3-201ENST00000428828 ADSLP30566 484 aaPredicted RBP11.32□□□□□ -0.6
CECR3-201ENST00000428828 CRHR1P34998 444 aa11.32□□□□□ -0.6
CECR3-201ENST00000428828 ETFBP38117 255 aa11.32□□□□□ -0.6
CECR3-201ENST00000428828 OPRD1P41143 372 aa11.32□□□□□ -0.6
CECR3-201ENST00000428828 NRLP54845 237 aa11.32□□□□□ -0.6
CECR3-201ENST00000428828 CSE1LP55060 971 aaKnown RBP11.32□□□□□ -0.6
CECR3-201ENST00000428828 YBEYP58557 167 aaPredicted RBP11.32□□□□□ -0.6
CECR3-201ENST00000428828 NFATC3Q12968 1075 aa11.32□□□□□ -0.6
CECR3-201ENST00000428828 SELENBP1Q13228 472 aa11.32□□□□□ -0.6
CECR3-201ENST00000428828 SERINC3Q13530 473 aa11.32□□□□□ -0.6
CECR3-201ENST00000428828 RFTN1Q14699 578 aaPredicted RBP11.32□□□□□ -0.6
CECR3-201ENST00000428828 PLEKHG6Q3KR16 790 aa11.32□□□□□ -0.6
CECR3-201ENST00000428828 PITRM1Q5JRX3 1037 aa11.32□□□□□ -0.6
CECR3-201ENST00000428828 AARS2Q5JTZ9 985 aaKnown RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms