RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 TEFMQ96QE5 360 aaKnown RBP16.83■□□□□ 0.28
TRIM39-209ENST00000428728 TRIM4Q9C037 500 aa16.83■□□□□ 0.28
TRIM39-209ENST00000428728 KLHL8Q9P2G9 620 aaPredicted RBP16.83■□□□□ 0.28
TRIM39-209ENST00000428728 VEGFDO43915 354 aa16.82■□□□□ 0.28
TRIM39-209ENST00000428728 CDK14O94921 469 aa16.82■□□□□ 0.28
TRIM39-209ENST00000428728 RPL10P27635 214 aaKnown RBP16.82■□□□□ 0.28
TRIM39-209ENST00000428728 TNNT3P45378 269 aaPredicted RBP16.82■□□□□ 0.28
TRIM39-209ENST00000428728 MARCKSL1P49006 195 aa16.82■□□□□ 0.28
TRIM39-209ENST00000428728 NR2C2P49116 596 aa16.82■□□□□ 0.28
TRIM39-209ENST00000428728 WNT3AP56704 352 aa16.82■□□□□ 0.28
TRIM39-209ENST00000428728 ADCY2Q08462 1091 aa16.82■□□□□ 0.28
TRIM39-209ENST00000428728 WASHC5Q12768 1159 aa16.82■□□□□ 0.28
TRIM39-209ENST00000428728 CLCA4Q14CN2 919 aa16.82■□□□□ 0.28
TRIM39-209ENST00000428728 ATP13A5Q4VNC0 1218 aa16.82■□□□□ 0.28
TRIM39-209ENST00000428728 SIRPB2Q5JXA9 342 aa16.82■□□□□ 0.28
TRIM39-209ENST00000428728 KDELC1Q6UW63 502 aa16.82■□□□□ 0.28
TRIM39-209ENST00000428728 TMEM26Q6ZUK4 368 aa16.82■□□□□ 0.28
TRIM39-209ENST00000428728 BZW1Q7L1Q6 419 aaKnown RBP16.82■□□□□ 0.28
TRIM39-209ENST00000428728 PLXDC1Q8IUK5 500 aa16.82■□□□□ 0.28
TRIM39-209ENST00000428728 ZNF547Q8IVP9 402 aa16.82■□□□□ 0.28
TRIM39-209ENST00000428728 P3H4Q92791 437 aa16.82■□□□□ 0.28
TRIM39-209ENST00000428728 TIMM29Q9BSF4 260 aa16.82■□□□□ 0.28
TRIM39-209ENST00000428728 EPB41L1Q9H4G0 881 aa16.82■□□□□ 0.28
TRIM39-209ENST00000428728 OGFRQ9NZT2 677 aa16.82■□□□□ 0.28
TRIM39-209ENST00000428728 ZNF624Q9P2J8 865 aaPredicted RBP16.82■□□□□ 0.28
TRIM39-209ENST00000428728 TRIM10Q9UDY6 481 aa16.82■□□□□ 0.28
TRIM39-209ENST00000428728 FAM153AQ9UHL3 310 aa16.82■□□□□ 0.28
TRIM39-209ENST00000428728 PILRAQ9UKJ1 303 aa16.82■□□□□ 0.28
TRIM39-209ENST00000428728 TMPRSS11EQ9UL52 423 aa16.82■□□□□ 0.28
TRIM39-209ENST00000428728 OR52A4PA6NMU1 304 aa16.81■□□□□ 0.28
TRIM39-209ENST00000428728 GPR39O43194 453 aa16.81■□□□□ 0.28
TRIM39-209ENST00000428728 UBXN7O94888 489 aa16.81■□□□□ 0.28
TRIM39-209ENST00000428728 XRCC1P18887 633 aaPredicted RBP16.81■□□□□ 0.28
TRIM39-209ENST00000428728 SLC19A1P41440 591 aa16.81■□□□□ 0.28
TRIM39-209ENST00000428728 MAGEA1P43355 309 aa16.81■□□□□ 0.28
TRIM39-209ENST00000428728 DRG2P55039 364 aaKnown RBP16.81■□□□□ 0.28
TRIM39-209ENST00000428728 GTF2H3Q13889 308 aa16.81■□□□□ 0.28
TRIM39-209ENST00000428728 TCEAL1Q15170 157 aa16.81■□□□□ 0.28
TRIM39-209ENST00000428728 TAZQ16635 292 aa16.81■□□□□ 0.28
TRIM39-209ENST00000428728 TFDP3Q5H9I0 405 aa16.81■□□□□ 0.28
TRIM39-209ENST00000428728 XKR5Q6UX68 686 aa16.81■□□□□ 0.28
TRIM39-209ENST00000428728 FAM151BQ6UXP7 276 aa16.81■□□□□ 0.28
TRIM39-209ENST00000428728 GLT6D1Q7Z4J2 308 aa16.81■□□□□ 0.28
TRIM39-209ENST00000428728 UNC5BQ8IZJ1 945 aa16.81■□□□□ 0.28
TRIM39-209ENST00000428728 NLGN4XQ8N0W4 816 aa16.81■□□□□ 0.28
TRIM39-209ENST00000428728 TTC30BQ8N4P2 665 aa16.81■□□□□ 0.28
TRIM39-209ENST00000428728 IPMKQ8NFU5 416 aa16.81■□□□□ 0.28
TRIM39-209ENST00000428728 NLGN4YQ8NFZ3 816 aaPredicted RBP16.81■□□□□ 0.28
TRIM39-209ENST00000428728 BLOC1S5Q8TDH9 187 aa16.81■□□□□ 0.28
TRIM39-209ENST00000428728 TGM7Q96PF1 710 aa16.81■□□□□ 0.28
TRIM39-209ENST00000428728 VPS35Q96QK1 796 aa16.81■□□□□ 0.28
TRIM39-209ENST00000428728 SRPK1Q96SB4 655 aaKnown RBP16.81■□□□□ 0.28
TRIM39-209ENST00000428728 GPN2Q9H9Y4 310 aaPredicted RBP16.81■□□□□ 0.28
TRIM39-209ENST00000428728 STARD5Q9NSY2 213 aa16.81■□□□□ 0.28
TRIM39-209ENST00000428728 TFR2Q9UP52 801 aa16.81■□□□□ 0.28
TRIM39-209ENST00000428728 ALG6Q9Y672 507 aa16.81■□□□□ 0.28
TRIM39-209ENST00000428728 SLC30A1Q9Y6M5 507 aa16.81■□□□□ 0.28
TRIM39-209ENST00000428728 hCG_1818297A0A087WSY0 165 aa16.8■□□□□ 0.28
TRIM39-209ENST00000428728 POLR1CO15160 346 aaPredicted RBP16.8■□□□□ 0.28
TRIM39-209ENST00000428728 MTSS1O43312 755 aa16.8■□□□□ 0.28
TRIM39-209ENST00000428728 BUD23O43709 281 aaKnown RBP16.8■□□□□ 0.28
TRIM39-209ENST00000428728 STK17BO94768 372 aa16.8■□□□□ 0.28
TRIM39-209ENST00000428728 PRKAR1AP10644 381 aa16.8■□□□□ 0.28
TRIM39-209ENST00000428728 AMD1P17707 334 aa16.8■□□□□ 0.28
TRIM39-209ENST00000428728 ITGB6P18564 788 aa16.8■□□□□ 0.28
TRIM39-209ENST00000428728 HMGCLP35914 325 aa16.8■□□□□ 0.28
TRIM39-209ENST00000428728 SEPHS1P49903 392 aa16.8■□□□□ 0.28
TRIM39-209ENST00000428728 TBX2Q13207 712 aaPredicted RBP16.8■□□□□ 0.28
TRIM39-209ENST00000428728 BORAQ6PGQ7 559 aa16.8■□□□□ 0.28
TRIM39-209ENST00000428728 TIPARPQ7Z3E1 657 aaKnown RBP16.8■□□□□ 0.28
TRIM39-209ENST00000428728 ZNF567Q8N184 647 aa16.8■□□□□ 0.28
TRIM39-209ENST00000428728 RSC1A1Q92681 617 aa16.8■□□□□ 0.28
TRIM39-209ENST00000428728 KIAA1143Q96AT1 154 aaPredicted RBP16.8■□□□□ 0.28
TRIM39-209ENST00000428728 CXorf40BQ96DE9 158 aa16.8■□□□□ 0.28
TRIM39-209ENST00000428728 OXNAD1Q96HP4 312 aaPredicted RBP16.8■□□□□ 0.28
TRIM39-209ENST00000428728 MRGPRX2Q96LB1 330 aa16.8■□□□□ 0.28
TRIM39-209ENST00000428728 C9orf72Q96LT7 481 aa16.8■□□□□ 0.28
TRIM39-209ENST00000428728 QKIQ96PU8 341 aaKnown RBP eCLIP16.8■□□□□ 0.28
TRIM39-209ENST00000428728 UCK1Q9HA47 277 aa16.8■□□□□ 0.28
TRIM39-209ENST00000428728 FBXO8Q9NRD0 319 aa16.8■□□□□ 0.28
TRIM39-209ENST00000428728 POT1Q9NUX5 634 aa16.8■□□□□ 0.28
TRIM39-209ENST00000428728 LOC101059948A0A1B0GTJ6 334 aa16.79■□□□□ 0.28
TRIM39-209ENST00000428728 LOC285095A0A1B0GVY8 99 aa16.79■□□□□ 0.28
TRIM39-209ENST00000428728 PRR19A6NJB7 356 aa16.79■□□□□ 0.28
TRIM39-209ENST00000428728 ZNF891A8MT65 544 aaPredicted RBP16.79■□□□□ 0.28
TRIM39-209ENST00000428728 PPFIA2O75334 1257 aa16.79■□□□□ 0.28
TRIM39-209ENST00000428728 RASSF9O75901 435 aa16.79■□□□□ 0.28
TRIM39-209ENST00000428728 C9P02748 559 aa16.79■□□□□ 0.28
TRIM39-209ENST00000428728 ANKRD34CP0C6C1 535 aa16.79■□□□□ 0.28
TRIM39-209ENST00000428728 BRAFP15056 766 aa16.79■□□□□ 0.28
TRIM39-209ENST00000428728 SPAM1P38567 509 aa16.79■□□□□ 0.28
TRIM39-209ENST00000428728 LEPRP48357 1165 aaKnown RBP16.79■□□□□ 0.28
TRIM39-209ENST00000428728 HADHBP55084 474 aaKnown RBP16.79■□□□□ 0.28
TRIM39-209ENST00000428728 FOXM1Q08050 763 aa16.79■□□□□ 0.28
TRIM39-209ENST00000428728 TMEM115Q12893 351 aaPredicted RBP16.79■□□□□ 0.28
TRIM39-209ENST00000428728 CHRNA6Q15825 494 aa16.79■□□□□ 0.28
TRIM39-209ENST00000428728 PPP2R5EQ16537 467 aa16.79■□□□□ 0.28
TRIM39-209ENST00000428728 PID1Q7Z2X4 250 aa16.79■□□□□ 0.28
TRIM39-209ENST00000428728 C11orf96Q7Z7L8 435 aa16.79■□□□□ 0.28
TRIM39-209ENST00000428728 KATNAL2Q8IYT4 538 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms