RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 RUFY1Q96T51 708 aa16.29■□□□□ 0.2
VARS-216ENST00000428445 TRIT1Q9H3H1 467 aaKnown RBP16.29■□□□□ 0.2
VARS-216ENST00000428445 AKIRIN1Q9H9L7 192 aaPredicted RBP16.29■□□□□ 0.2
VARS-216ENST00000428445 CTTNBP2NLQ9P2B4 639 aa16.29■□□□□ 0.2
VARS-216ENST00000428445 LCMT1Q9UIC8 334 aa16.29■□□□□ 0.2
VARS-216ENST00000428445 WDR37Q9Y2I8 494 aa16.29■□□□□ 0.2
VARS-216ENST00000428445 HEY1Q9Y5J3 304 aa16.29■□□□□ 0.2
VARS-216ENST00000428445 RGSL1A5PLK6 1076 aa16.28■□□□□ 0.2
VARS-216ENST00000428445 CHUKO15111 745 aa16.28■□□□□ 0.2
VARS-216ENST00000428445 NDUFA10O95299 355 aa16.28■□□□□ 0.2
VARS-216ENST00000428445 TIAF1O95411 115 aa16.28■□□□□ 0.2
VARS-216ENST00000428445 ANKRD34CP0C6C1 535 aa16.28■□□□□ 0.2
VARS-216ENST00000428445 BPIP17213 487 aa16.28■□□□□ 0.2
VARS-216ENST00000428445 KDELR1P24390 212 aa16.28■□□□□ 0.2
VARS-216ENST00000428445 CLCNKAP51800 687 aa16.28■□□□□ 0.2
VARS-216ENST00000428445 TPM4P67936 248 aa16.28■□□□□ 0.2
VARS-216ENST00000428445 FANCCQ00597 558 aa16.28■□□□□ 0.2
VARS-216ENST00000428445 AP1B1Q10567 949 aa16.28■□□□□ 0.2
VARS-216ENST00000428445 NOMO1Q15155 1222 aa16.28■□□□□ 0.2
VARS-216ENST00000428445 HIST2H2BCQ6DN03 193 aa16.28■□□□□ 0.2
VARS-216ENST00000428445 MAP7D3Q8IWC1 876 aa16.28■□□□□ 0.2
VARS-216ENST00000428445 PLD5Q8N7P1 536 aa16.28■□□□□ 0.2
VARS-216ENST00000428445 RNF157Q96PX1 679 aa16.28■□□□□ 0.2
VARS-216ENST00000428445 ADGRE3Q9BY15 652 aa16.28■□□□□ 0.2
VARS-216ENST00000428445 NENFQ9UMX5 172 aa16.28■□□□□ 0.2
VARS-216ENST00000428445 ZNF711Q9Y462 761 aa16.28■□□□□ 0.2
VARS-216ENST00000428445 SPO11Q9Y5K1 396 aa16.28■□□□□ 0.2
VARS-216ENST00000428445 CDC14CA4D256 554 aa16.27■□□□□ 0.2
VARS-216ENST00000428445 KMOO15229 486 aa16.27■□□□□ 0.2
VARS-216ENST00000428445 SPAG6O75602 509 aa16.27■□□□□ 0.2
VARS-216ENST00000428445 DNAJB5O75953 348 aa16.27■□□□□ 0.2
VARS-216ENST00000428445 MT-CYBP00156 380 aaPredicted RBP16.27■□□□□ 0.2
VARS-216ENST00000428445 PDGFAP04085 211 aa16.27■□□□□ 0.2
VARS-216ENST00000428445 MX2P20592 715 aa16.27■□□□□ 0.2
VARS-216ENST00000428445 CA5AP35218 305 aa16.27■□□□□ 0.2
VARS-216ENST00000428445 ZBED6P86452 979 aa16.27■□□□□ 0.2
VARS-216ENST00000428445 MC1RQ01726 317 aa16.27■□□□□ 0.2
VARS-216ENST00000428445 PPIDQ08752 370 aaKnown RBP16.27■□□□□ 0.2
VARS-216ENST00000428445 GPR18Q14330 331 aa16.27■□□□□ 0.2
VARS-216ENST00000428445 KCNAB1Q14722 419 aa16.27■□□□□ 0.2
VARS-216ENST00000428445 CACHD1Q5VU97 1274 aa16.27■□□□□ 0.2
VARS-216ENST00000428445 IRGCQ6NXR0 463 aa16.27■□□□□ 0.2
VARS-216ENST00000428445 CAVIN1Q6NZI2 390 aaKnown RBP16.27■□□□□ 0.2
VARS-216ENST00000428445 CERS6Q6ZMG9 384 aa16.27■□□□□ 0.2
VARS-216ENST00000428445 LUZP1Q86V48 1076 aa16.27■□□□□ 0.2
VARS-216ENST00000428445 LRRTM4Q86VH4 590 aa16.27■□□□□ 0.2
VARS-216ENST00000428445 TRAM1L1Q8N609 369 aa16.27■□□□□ 0.2
VARS-216ENST00000428445 STAMBPL1Q96FJ0 436 aa16.27■□□□□ 0.2
VARS-216ENST00000428445 GPR63Q9BZJ6 419 aa16.27■□□□□ 0.2
VARS-216ENST00000428445 EPB41L1Q9H4G0 881 aa16.27■□□□□ 0.2
VARS-216ENST00000428445 ZNF768Q9H5H4 540 aaKnown RBP16.27■□□□□ 0.2
VARS-216ENST00000428445 UBP1Q9NZI7 540 aa16.27■□□□□ 0.2
VARS-216ENST00000428445 LNPEPQ9UIQ6 1025 aa16.27■□□□□ 0.2
VARS-216ENST00000428445 CAPN11Q9UMQ6 739 aa16.27■□□□□ 0.2
VARS-216ENST00000428445 MAN2B2Q9Y2E5 1009 aa16.27■□□□□ 0.2
VARS-216ENST00000428445 CLEC18AA5D8T8 446 aa16.26■□□□□ 0.19
VARS-216ENST00000428445 MTA2O94776 668 aa16.26■□□□□ 0.19
VARS-216ENST00000428445 CDK14O94921 469 aa16.26■□□□□ 0.19
VARS-216ENST00000428445 KRT7P08729 469 aa16.26■□□□□ 0.19
VARS-216ENST00000428445 NOP2P46087 812 aaKnown RBP16.26■□□□□ 0.19
VARS-216ENST00000428445 UBASH3AP57075 661 aa16.26■□□□□ 0.19
VARS-216ENST00000428445 IFI35P80217 286 aaPredicted RBP16.26■□□□□ 0.19
VARS-216ENST00000428445 KLRB1Q12918 225 aa16.26■□□□□ 0.19
VARS-216ENST00000428445 SEPT6Q14141 434 aa16.26■□□□□ 0.19
VARS-216ENST00000428445 MAP7Q14244 749 aa16.26■□□□□ 0.19
VARS-216ENST00000428445 MESDQ14696 234 aa16.26■□□□□ 0.19
VARS-216ENST00000428445 FAM199XQ6PEV8 388 aaPredicted RBP16.26■□□□□ 0.19
VARS-216ENST00000428445 CLEC18BQ6UXF7 455 aa16.26■□□□□ 0.19
VARS-216ENST00000428445 NT5DC3Q86UY8 548 aa16.26■□□□□ 0.19
VARS-216ENST00000428445 CLEC18CQ8NCF0 446 aa16.26■□□□□ 0.19
VARS-216ENST00000428445 MIB2Q96AX9 1013 aa16.26■□□□□ 0.19
VARS-216ENST00000428445 IMP4Q96G21 291 aaKnown RBP16.26■□□□□ 0.19
VARS-216ENST00000428445 ZSCAN5AQ9BUG6 496 aa16.26■□□□□ 0.19
VARS-216ENST00000428445 UCK1Q9HA47 277 aa16.26■□□□□ 0.19
VARS-216ENST00000428445 CBX8Q9HC52 389 aa16.26■□□□□ 0.19
VARS-216ENST00000428445 MAGEE1Q9HCI5 957 aa16.26■□□□□ 0.19
VARS-216ENST00000428445 SLC40A1Q9NP59 571 aa16.26■□□□□ 0.19
VARS-216ENST00000428445 TLK1Q9UKI8 766 aa16.26■□□□□ 0.19
VARS-216ENST00000428445 KCTD3Q9Y597 815 aa16.26■□□□□ 0.19
VARS-216ENST00000428445 PCDHB3Q9Y5E6 796 aa16.26■□□□□ 0.19
VARS-216ENST00000428445 IGHV5-51A0A0C4DH38 117 aa16.25■□□□□ 0.19
VARS-216ENST00000428445 PIPSLA2A3N6 862 aa16.25■□□□□ 0.19
VARS-216ENST00000428445 LRRD1A4D1F6 860 aa16.25■□□□□ 0.19
VARS-216ENST00000428445 C3orf70A6NLC5 250 aaPredicted RBP16.25■□□□□ 0.19
VARS-216ENST00000428445 F5H423 210 aaPredicted RBP16.25■□□□□ 0.19
VARS-216ENST00000428445 GPR39O43194 453 aa16.25■□□□□ 0.19
VARS-216ENST00000428445 PMPCBO75439 489 aa16.25■□□□□ 0.19
VARS-216ENST00000428445 GYPCP04921 128 aa16.25■□□□□ 0.19
VARS-216ENST00000428445 FOLR1P15328 257 aa16.25■□□□□ 0.19
VARS-216ENST00000428445 RPS18P62269 152 aaKnown RBP16.25■□□□□ 0.19
VARS-216ENST00000428445 CDK18Q07002 472 aa16.25■□□□□ 0.19
VARS-216ENST00000428445 LLGL1Q15334 1064 aa16.25■□□□□ 0.19
VARS-216ENST00000428445 ATP13A5Q4VNC0 1218 aa16.25■□□□□ 0.19
VARS-216ENST00000428445 ABRAXAS1Q6UWZ7 409 aa16.25■□□□□ 0.19
VARS-216ENST00000428445 C11orf96Q7Z7L8 435 aa16.25■□□□□ 0.19
VARS-216ENST00000428445 TEX19Q8NA77 164 aa16.25■□□□□ 0.19
VARS-216ENST00000428445 GPR150Q8NGU9 434 aa16.25■□□□□ 0.19
VARS-216ENST00000428445 CT55Q8WUE5 264 aa16.25■□□□□ 0.19
VARS-216ENST00000428445 NAT14Q8WUY8 206 aa16.25■□□□□ 0.19
VARS-216ENST00000428445 CXorf40BQ96DE9 158 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms