RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 PITX2Q99697 317 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 C2orf40Q9H1Z8 148 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 NIPAL2Q9H841 368 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 AKTIPQ9H8T0 292 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 SNTG2Q9NY99 539 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 GMPR2Q9P2T1 348 aaKnown RBP5.1□□□□□ -1.59
RIF1-203ENST00000428287 UBA2Q9UBT2 640 aaPredicted RBP5.1□□□□□ -1.59
RIF1-203ENST00000428287 PCDHGA10Q9Y5H3 936 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 MGAQ8IWI9 3026 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 TRBV5-3A0A0A0MS03 114 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 A0A0X1KG70 313 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 ARNTLO00327 626 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 S100BP04271 92 aaPredicted RBP5.1□□□□□ -1.59
RIF1-203ENST00000428287 RBP1P09455 135 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 ELK4P28324 431 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 NPY2RP49146 381 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 IRF9Q00978 393 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 TBCEQ15813 527 aaPredicted RBP5.1□□□□□ -1.59
RIF1-203ENST00000428287 AAK1Q2M2I8 961 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.1□□□□□ -1.59
RIF1-203ENST00000428287 CREB3L2Q70SY1 520 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 KCNMB4Q86W47 210 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 C8orf59Q8N0T1 100 aaPredicted RBP5.1□□□□□ -1.59
RIF1-203ENST00000428287 TMEM199Q8N511 208 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 LGMNQ99538 433 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 SOX17Q9H6I2 414 aaPredicted RBP5.1□□□□□ -1.59
RIF1-203ENST00000428287 CHRAC1Q9NRG0 131 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 TPST1O60507 370 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 CCNKO75909 580 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 EEF1B2P24534 225 aaKnown RBP5.1□□□□□ -1.59
RIF1-203ENST00000428287 ERP29P30040 261 aaKnown RBP5.1□□□□□ -1.59
RIF1-203ENST00000428287 SDC4P31431 198 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 S100A5P33763 92 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 DCTP40126 519 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 TAGLNQ01995 201 aaKnown RBP5.1□□□□□ -1.59
RIF1-203ENST00000428287 EMX2Q04743 252 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 ZNF470Q6ECI4 717 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 DENND5AQ6IQ26 1287 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 CAPN13Q6MZZ7 669 aaPredicted RBP5.1□□□□□ -1.59
RIF1-203ENST00000428287 LIMS2Q7Z4I7 341 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 NT5DC4Q86YG4 428 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 SLC22A9Q8IVM8 553 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 TCTE3Q8IZS6 198 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 PAF1Q8N7H5 531 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 BLOC1S5Q8TDH9 187 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 BIRC7Q96CA5 298 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 TEKT5Q96M29 485 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 TOR3AQ9H497 397 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 JPH1Q9HDC5 661 aaPredicted RBP5.1□□□□□ -1.59
RIF1-203ENST00000428287 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.1□□□□□ -1.594e-6■■□□□ 13.4
RIF1-203ENST00000428287 TRHDEQ9UKU6 1024 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 ITM2BQ9Y287 266 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 PDHXO00330 501 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 DSCR3O14972 297 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 INMTO95050 263 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 ENPP1P22413 925 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 SLC15A1P46059 708 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 RGS7P49802 495 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 KPNA2P52292 529 aaKnown RBP5.1□□□□□ -1.59
RIF1-203ENST00000428287 SH3BP2P78314 561 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 POU4F1Q01851 419 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 TNFAIP2Q03169 654 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 PRKG2Q13237 762 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 GALNT3Q14435 633 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 PGM5Q15124 567 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 XKR7Q5GH72 579 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 FAM102BQ5T8I3 360 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 NXNL2Q5VZ03 156 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 ZNF544Q6NX49 715 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 ZNF767PQ75MW2 155 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 PLPP6Q8IY26 295 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 RMDN1Q96DB5 314 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 C12orf42Q96LP6 360 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 NSMCE2Q96MF7 247 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 NPY6RQ99463 290 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 DCSTAMPQ9H295 470 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 ACTL8Q9H568 366 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 RETREG1Q9H6L5 497 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 TASP1Q9H6P5 420 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 ACOT13Q9NPJ3 140 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 PGAP2Q9UHJ9 254 aa5.1□□□□□ -1.59
RIF1-203ENST00000428287 SPTAN1Q13813 2472 aaKnown RBP5.09□□□□□ -1.59
RIF1-203ENST00000428287 EEDO75530 441 aaKnown RBP5.09□□□□□ -1.59
RIF1-203ENST00000428287 PAPSS2O95340 614 aaPredicted RBP5.09□□□□□ -1.59
RIF1-203ENST00000428287 PCSK2P16519 638 aa5.09□□□□□ -1.59
RIF1-203ENST00000428287 CYP2A7P20853 494 aa5.09□□□□□ -1.59
RIF1-203ENST00000428287 PSMB4P28070 264 aa5.09□□□□□ -1.59
RIF1-203ENST00000428287 YAP1P46937 504 aaKnown RBP5.09□□□□□ -1.59
RIF1-203ENST00000428287 NCS1P62166 190 aa5.09□□□□□ -1.59
RIF1-203ENST00000428287 DMPKQ09013 629 aa5.09□□□□□ -1.59
RIF1-203ENST00000428287 NME3Q13232 169 aa5.09□□□□□ -1.59
RIF1-203ENST00000428287 PRKG1Q13976 671 aa5.09□□□□□ -1.59
RIF1-203ENST00000428287 CLCA4Q14CN2 919 aa5.09□□□□□ -1.59
RIF1-203ENST00000428287 CES5AQ6NT32 575 aa5.09□□□□□ -1.59
RIF1-203ENST00000428287 OTOP3Q7RTS5 596 aa5.09□□□□□ -1.59
RIF1-203ENST00000428287 SNX20Q7Z614 316 aa5.09□□□□□ -1.59
RIF1-203ENST00000428287 PROKR1Q8TCW9 393 aa5.09□□□□□ -1.59
RIF1-203ENST00000428287 SLC38A4Q969I6 547 aa5.09□□□□□ -1.59
RIF1-203ENST00000428287 PDXPQ96GD0 296 aa5.09□□□□□ -1.59
RIF1-203ENST00000428287 WDFY2Q96P53 400 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms