RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 A0A1W2PNU3 283 aaPredicted RBP20.38■□□□□ 0.85
HSPG2-205ENST00000427897 CHUKO15111 745 aa20.38■□□□□ 0.85
HSPG2-205ENST00000427897 PSMD3O43242 534 aa20.38■□□□□ 0.85
HSPG2-205ENST00000427897 DUX1O43812 170 aa20.38■□□□□ 0.85
HSPG2-205ENST00000427897 EML2O95834 649 aa20.38■□□□□ 0.85
HSPG2-205ENST00000427897 CCDC175P0C221 793 aa20.38■□□□□ 0.85
HSPG2-205ENST00000427897 HGFP14210 728 aa20.38■□□□□ 0.85
HSPG2-205ENST00000427897 MSH3P20585 1137 aa20.38■□□□□ 0.85
HSPG2-205ENST00000427897 AKT1P31749 480 aa20.38■□□□□ 0.85
HSPG2-205ENST00000427897 MAPK10P53779 464 aa20.38■□□□□ 0.85
HSPG2-205ENST00000427897 NR1D2Q14995 579 aa20.38■□□□□ 0.85
HSPG2-205ENST00000427897 RPS6KA1Q15418 735 aa20.38■□□□□ 0.85
HSPG2-205ENST00000427897 TMEM164Q5U3C3 297 aa20.38■□□□□ 0.85
HSPG2-205ENST00000427897 RANBP10Q6VN20 620 aa20.38■□□□□ 0.85
HSPG2-205ENST00000427897 SPACA3Q8IXA5 215 aa20.38■□□□□ 0.85
HSPG2-205ENST00000427897 ZNF398Q8TD17 642 aa20.38■□□□□ 0.85
HSPG2-205ENST00000427897 PRR11Q96HE9 360 aaPredicted RBP20.38■□□□□ 0.85
HSPG2-205ENST00000427897 NUDT22Q9BRQ3 303 aa20.38■□□□□ 0.85
HSPG2-205ENST00000427897 SARS2Q9NP81 518 aaKnown RBP20.38■□□□□ 0.85
HSPG2-205ENST00000427897 LZTFL1Q9NQ48 299 aa20.38■□□□□ 0.85
HSPG2-205ENST00000427897 PRDM8Q9NQV8 689 aa20.38■□□□□ 0.85
HSPG2-205ENST00000427897 URB1O60287 2271 aaKnown RBP20.37■□□□□ 0.85
HSPG2-205ENST00000427897 PMS2P1A4D2B8 440 aa20.37■□□□□ 0.85
HSPG2-205ENST00000427897 VIPP01282 170 aa20.37■□□□□ 0.85
HSPG2-205ENST00000427897 IDSP22304 550 aa20.37■□□□□ 0.85
HSPG2-205ENST00000427897 CLCNKAP51800 687 aa20.37■□□□□ 0.85
HSPG2-205ENST00000427897 SPARCL1Q14515 664 aa20.37■□□□□ 0.85
HSPG2-205ENST00000427897 SEPT7Q16181 437 aaKnown RBP20.37■□□□□ 0.85
HSPG2-205ENST00000427897 P3H1Q32P28 736 aa20.37■□□□□ 0.85
HSPG2-205ENST00000427897 OR4K2Q8NGD2 314 aa20.37■□□□□ 0.85
HSPG2-205ENST00000427897 DTX3LQ8TDB6 740 aa20.37■□□□□ 0.85
HSPG2-205ENST00000427897 NCSTNQ92542 709 aa20.37■□□□□ 0.85
HSPG2-205ENST00000427897 TIMM29Q9BSF4 260 aa20.37■□□□□ 0.85
HSPG2-205ENST00000427897 TMEM121Q9BTD3 319 aa20.37■□□□□ 0.85
HSPG2-205ENST00000427897 ASB8Q9H765 288 aa20.37■□□□□ 0.85
HSPG2-205ENST00000427897 CPNE7Q9UBL6 633 aa20.37■□□□□ 0.85
HSPG2-205ENST00000427897 FEZ2Q9UHY8 353 aaPredicted RBP20.37■□□□□ 0.85
HSPG2-205ENST00000427897 CDRT15L2A8MXV6 281 aa20.36■□□□□ 0.85
HSPG2-205ENST00000427897 GAS8O95995 478 aa20.36■□□□□ 0.85
HSPG2-205ENST00000427897 CSTF2P33240 577 aaKnown RBP eCLIP20.36■□□□□ 0.85
HSPG2-205ENST00000427897 ADRA1AP35348 466 aa20.36■□□□□ 0.85
HSPG2-205ENST00000427897 HALP42357 657 aa20.36■□□□□ 0.85
HSPG2-205ENST00000427897 LMAN1P49257 510 aa20.36■□□□□ 0.85
HSPG2-205ENST00000427897 UCNP55089 124 aa20.36■□□□□ 0.85
HSPG2-205ENST00000427897 CXADRP78310 365 aa20.36■□□□□ 0.85
HSPG2-205ENST00000427897 OLIG2Q13516 323 aa20.36■□□□□ 0.85
HSPG2-205ENST00000427897 PTPRCAPQ14761 206 aa20.36■□□□□ 0.85
HSPG2-205ENST00000427897 SNAP47Q5SQN1 464 aa20.36■□□□□ 0.85
HSPG2-205ENST00000427897 SLITRK4Q8IW52 837 aa20.36■□□□□ 0.85
HSPG2-205ENST00000427897 RCBTB1Q8NDN9 531 aa20.36■□□□□ 0.85
HSPG2-205ENST00000427897 OR4D9Q8NGE8 314 aa20.36■□□□□ 0.85
HSPG2-205ENST00000427897 CCDC74BQ96LY2 380 aa20.36■□□□□ 0.85
HSPG2-205ENST00000427897 GORASP1Q9BQQ3 440 aa20.36■□□□□ 0.85
HSPG2-205ENST00000427897 SLC23A2Q9UGH3 650 aa20.36■□□□□ 0.85
HSPG2-205ENST00000427897 ZNF148Q9UQR1 794 aa20.36■□□□□ 0.85
HSPG2-205ENST00000427897 UNC13CQ8NB66 2214 aa20.35■□□□□ 0.85
HSPG2-205ENST00000427897 IGHV5-10-1A0A0J9YXX1 117 aa20.35■□□□□ 0.85
HSPG2-205ENST00000427897 KCNJ13O60928 360 aa20.35■□□□□ 0.85
HSPG2-205ENST00000427897 PRAMEF1O95521 474 aa20.35■□□□□ 0.85
HSPG2-205ENST00000427897 ITIH1P19827 911 aa20.35■□□□□ 0.85
HSPG2-205ENST00000427897 MPSTP25325 297 aa20.35■□□□□ 0.85
HSPG2-205ENST00000427897 RPL10P27635 214 aaKnown RBP20.35■□□□□ 0.85
HSPG2-205ENST00000427897 SLC5A2P31639 672 aa20.35■□□□□ 0.85
HSPG2-205ENST00000427897 STIP1P31948 543 aaKnown RBP20.35■□□□□ 0.85
HSPG2-205ENST00000427897 HADHAP40939 763 aa20.35■□□□□ 0.85
HSPG2-205ENST00000427897 LIMK2P53671 638 aa20.35■□□□□ 0.85
HSPG2-205ENST00000427897 TMPRSS15P98073 1019 aa20.35■□□□□ 0.85
HSPG2-205ENST00000427897 KLF1Q13351 362 aaPredicted RBP20.35■□□□□ 0.85
HSPG2-205ENST00000427897 TRA2AQ13595 282 aaKnown RBP eCLIP20.35■□□□□ 0.85
HSPG2-205ENST00000427897 LONRF2Q1L5Z9 754 aa20.35■□□□□ 0.85
HSPG2-205ENST00000427897 CHCHD2P9Q5T1J5 151 aaPredicted RBP20.35■□□□□ 0.85
HSPG2-205ENST00000427897 TMEM71Q6P5X7 295 aa20.35■□□□□ 0.85
HSPG2-205ENST00000427897 TMEM220Q6QAJ8 160 aa20.35■□□□□ 0.85
HSPG2-205ENST00000427897 TMPRSS9Q7Z410 1059 aa20.35■□□□□ 0.85
HSPG2-205ENST00000427897 CLEC14AQ86T13 490 aa20.35■□□□□ 0.85
HSPG2-205ENST00000427897 AMZ2Q86W34 360 aa20.35■□□□□ 0.85
HSPG2-205ENST00000427897 TAB3Q8N5C8 712 aaPredicted RBP20.35■□□□□ 0.85
HSPG2-205ENST00000427897 CXorf40BQ96DE9 158 aa20.35■□□□□ 0.85
HSPG2-205ENST00000427897 DCUN1D1Q96GG9 259 aa20.35■□□□□ 0.85
HSPG2-205ENST00000427897 CRELD1Q96HD1 420 aa20.35■□□□□ 0.85
HSPG2-205ENST00000427897 FCRL3Q96P31 734 aaPredicted RBP20.35■□□□□ 0.85
HSPG2-205ENST00000427897 FRMD8P1Q9BZ68 369 aaPredicted RBP20.35■□□□□ 0.85
HSPG2-205ENST00000427897 LRRC40Q9H9A6 602 aa20.35■□□□□ 0.85
HSPG2-205ENST00000427897 TMPRSS11EQ9UL52 423 aa20.35■□□□□ 0.85
HSPG2-205ENST00000427897 R3HDM2Q9Y2K5 976 aaKnown RBP20.35■□□□□ 0.85
HSPG2-205ENST00000427897 SLC30A1Q9Y6M5 507 aa20.35■□□□□ 0.85
HSPG2-205ENST00000427897 SCN8AQ9UQD0 1980 aa20.35■□□□□ 0.85
HSPG2-205ENST00000427897 TCRBV7S2A1N4TA0A589 114 aa20.34■□□□□ 0.85
HSPG2-205ENST00000427897 EIF4E1BA6NMX2 242 aaKnown RBP20.34■□□□□ 0.85
HSPG2-205ENST00000427897 E7EVH7 732 aa20.34■□□□□ 0.85
HSPG2-205ENST00000427897 SRP72O76094 671 aaKnown RBP20.34■□□□□ 0.85
HSPG2-205ENST00000427897 RALBP11234 206 aa20.34■□□□□ 0.85
HSPG2-205ENST00000427897 HOXB3P14651 431 aaPredicted RBP20.34■□□□□ 0.85
HSPG2-205ENST00000427897 PBLDP30039 288 aaPredicted RBP20.34■□□□□ 0.85
HSPG2-205ENST00000427897 TMPRSS3P57727 454 aa20.34■□□□□ 0.85
HSPG2-205ENST00000427897 TLE3Q04726 772 aa20.34■□□□□ 0.85
HSPG2-205ENST00000427897 KHDC1Q4VXA5 237 aaKnown RBP20.34■□□□□ 0.85
HSPG2-205ENST00000427897 GPRC6AQ5T6X5 926 aa20.34■□□□□ 0.85
HSPG2-205ENST00000427897 ZNF574Q6ZN55 896 aaPredicted RBP20.34■□□□□ 0.85
HSPG2-205ENST00000427897 SLC35B2Q8TB61 432 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms