RNA–Protein interactions for RNA: ENST00000427497.3

AC055811.2-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC055811.2, Length 1,693 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055811.2-201ENST00000427497 PRSS16Q9NQE7 514 aa17.77■□□□□ 0.44
AC055811.2-201ENST00000427497 GALPQ9UBC7 116 aa17.77■□□□□ 0.44
AC055811.2-201ENST00000427497 CRLS1Q9UJA2 301 aa17.77■□□□□ 0.44
AC055811.2-201ENST00000427497 EP300Q09472 2414 aaPredicted RBP17.77■□□□□ 0.44
AC055811.2-201ENST00000427497 RGSL1A5PLK6 1076 aa17.77■□□□□ 0.43
AC055811.2-201ENST00000427497 SPINT1O43278 529 aa17.77■□□□□ 0.43
AC055811.2-201ENST00000427497 DLX3O60479 287 aa17.77■□□□□ 0.43
AC055811.2-201ENST00000427497 CD1DP15813 335 aa17.77■□□□□ 0.43
AC055811.2-201ENST00000427497 TNFRSF4P43489 277 aa17.77■□□□□ 0.43
AC055811.2-201ENST00000427497 HNRNPH2P55795 449 aaKnown RBP17.77■□□□□ 0.43
AC055811.2-201ENST00000427497 ATP13A5Q4VNC0 1218 aa17.77■□□□□ 0.43
AC055811.2-201ENST00000427497 LIPMQ5VYY2 423 aa17.77■□□□□ 0.43
AC055811.2-201ENST00000427497 ERAP2Q6P179 960 aa17.77■□□□□ 0.43
AC055811.2-201ENST00000427497 PAQR3Q6TCH7 311 aa17.77■□□□□ 0.43
AC055811.2-201ENST00000427497 ISCA2Q86U28 154 aa17.77■□□□□ 0.43
AC055811.2-201ENST00000427497 C10orf82Q8WW14 230 aa17.77■□□□□ 0.43
AC055811.2-201ENST00000427497 SREK1Q8WXA9 508 aaKnown RBP17.77■□□□□ 0.43
AC055811.2-201ENST00000427497 CCDC97Q96F63 343 aaPredicted RBP17.77■□□□□ 0.43
AC055811.2-201ENST00000427497 P2RY13Q9BPV8 354 aa17.77■□□□□ 0.43
AC055811.2-201ENST00000427497 PLCD4Q9BRC7 762 aa17.77■□□□□ 0.43
AC055811.2-201ENST00000427497 TRIM55Q9BYV6 548 aa17.77■□□□□ 0.43
AC055811.2-201ENST00000427497 CLPBQ9H078 707 aa17.77■□□□□ 0.43
AC055811.2-201ENST00000427497 PRMT8Q9NR22 394 aaPredicted RBP17.77■□□□□ 0.43
AC055811.2-201ENST00000427497 RAD18Q9NS91 495 aa17.77■□□□□ 0.43
AC055811.2-201ENST00000427497 CACNA2D2Q9NY47 1150 aa17.77■□□□□ 0.43
AC055811.2-201ENST00000427497 IGLV3-16A0A075B6K0 115 aa17.76■□□□□ 0.43
AC055811.2-201ENST00000427497 SPECC1L-ADORA2AF8WAN1 911 aa17.76■□□□□ 0.43
AC055811.2-201ENST00000427497 NPC1O15118 1278 aa17.76■□□□□ 0.43
AC055811.2-201ENST00000427497 ITM2AO43736 263 aa17.76■□□□□ 0.43
AC055811.2-201ENST00000427497 EPHX1P07099 455 aa17.76■□□□□ 0.43
AC055811.2-201ENST00000427497 CHRNB1P11230 501 aa17.76■□□□□ 0.43
AC055811.2-201ENST00000427497 TFEBP19484 476 aa17.76■□□□□ 0.43
AC055811.2-201ENST00000427497 ARRB2P32121 409 aa17.76■□□□□ 0.43
AC055811.2-201ENST00000427497 CTHP32929 405 aa17.76■□□□□ 0.43
AC055811.2-201ENST00000427497 SKIV2L2P42285 1042 aaKnown RBP17.76■□□□□ 0.43
AC055811.2-201ENST00000427497 SLC1A6P48664 564 aa17.76■□□□□ 0.43
AC055811.2-201ENST00000427497 E2F5Q15329 346 aa17.76■□□□□ 0.43
AC055811.2-201ENST00000427497 NAPRTQ6XQN6 538 aa17.76■□□□□ 0.43
AC055811.2-201ENST00000427497 LIPIQ6XZB0 460 aa17.76■□□□□ 0.43
AC055811.2-201ENST00000427497 ATG14Q6ZNE5 492 aa17.76■□□□□ 0.43
AC055811.2-201ENST00000427497 TECPR1Q7Z6L1 1165 aa17.76■□□□□ 0.43
AC055811.2-201ENST00000427497 DSG4Q86SJ6 1040 aa17.76■□□□□ 0.43
AC055811.2-201ENST00000427497 RALGPS2Q86X27 583 aaPredicted RBP17.76■□□□□ 0.43
AC055811.2-201ENST00000427497 RAVER1Q8IY67 606 aaKnown RBP17.76■□□□□ 0.43
AC055811.2-201ENST00000427497 CD200R1Q8TD46 325 aa17.76■□□□□ 0.43
AC055811.2-201ENST00000427497 EZH1Q92800 747 aaPredicted RBP17.76■□□□□ 0.43
AC055811.2-201ENST00000427497 FAM136AQ96C01 138 aa17.76■□□□□ 0.43
AC055811.2-201ENST00000427497 ULK4Q96C45 1275 aa17.76■□□□□ 0.43
AC055811.2-201ENST00000427497 SLC30A3Q99726 388 aa17.76■□□□□ 0.43
AC055811.2-201ENST00000427497 IER2Q9BTL4 223 aa17.76■□□□□ 0.43
AC055811.2-201ENST00000427497 BOCQ9BWV1 1114 aa17.76■□□□□ 0.43
AC055811.2-201ENST00000427497 GATA5Q9BWX5 397 aaPredicted RBP17.76■□□□□ 0.43
AC055811.2-201ENST00000427497 DERL2Q9GZP9 239 aa17.76■□□□□ 0.43
AC055811.2-201ENST00000427497 CDH19Q9H159 772 aa17.76■□□□□ 0.43
AC055811.2-201ENST00000427497 NPHS2Q9NP85 383 aa17.76■□□□□ 0.43
AC055811.2-201ENST00000427497 ZDHHC4Q9NPG8 344 aa17.76■□□□□ 0.43
AC055811.2-201ENST00000427497 SMOXQ9NWM0 555 aa17.76■□□□□ 0.43
AC055811.2-201ENST00000427497 ZDHHC3Q9NYG2 299 aa17.76■□□□□ 0.43
AC055811.2-201ENST00000427497 STON1Q9Y6Q2 735 aa17.76■□□□□ 0.43
AC055811.2-201ENST00000427497 CKAP5Q14008 2032 aa17.76■□□□□ 0.43
AC055811.2-201ENST00000427497 SPTBN4Q9H254 2564 aa17.76■□□□□ 0.43
AC055811.2-201ENST00000427497 TMEM114B3SHH9 223 aa17.75■□□□□ 0.43
AC055811.2-201ENST00000427497 K7EQS6 105 aa17.75■□□□□ 0.43
AC055811.2-201ENST00000427497 PSMD11O00231 422 aa17.75■□□□□ 0.43
AC055811.2-201ENST00000427497 AREL1O15033 823 aa17.75■□□□□ 0.43
AC055811.2-201ENST00000427497 ZBTB14O43829 449 aa17.75■□□□□ 0.43
AC055811.2-201ENST00000427497 KIR2DL1P43626 348 aaPredicted RBP17.75■□□□□ 0.43
AC055811.2-201ENST00000427497 CLCN7P51798 805 aa17.75■□□□□ 0.43
AC055811.2-201ENST00000427497 ABCE1P61221 599 aaKnown RBP17.75■□□□□ 0.43
AC055811.2-201ENST00000427497 TXNDC11Q6PKC3 985 aa17.75■□□□□ 0.43
AC055811.2-201ENST00000427497 MAMSTRQ6ZN01 415 aa17.75■□□□□ 0.43
AC055811.2-201ENST00000427497 MACC1Q6ZN28 852 aa17.75■□□□□ 0.43
AC055811.2-201ENST00000427497 Q6ZVL8 140 aa17.75■□□□□ 0.43
AC055811.2-201ENST00000427497 TXNDC5Q8NBS9 432 aaKnown RBP17.75■□□□□ 0.43
AC055811.2-201ENST00000427497 GIMAP7Q8NHV1 300 aa17.75■□□□□ 0.43
AC055811.2-201ENST00000427497 NELL1Q92832 810 aa17.75■□□□□ 0.43
AC055811.2-201ENST00000427497 PTERQ96BW5 349 aa17.75■□□□□ 0.43
AC055811.2-201ENST00000427497 THOC1Q96FV9 657 aaKnown RBP17.75■□□□□ 0.43
AC055811.2-201ENST00000427497 PPP1R16AQ96I34 528 aa17.75■□□□□ 0.43
AC055811.2-201ENST00000427497 SORT1Q99523 831 aa17.75■□□□□ 0.43
AC055811.2-201ENST00000427497 FAM83DQ9H4H8 585 aa17.75■□□□□ 0.43
AC055811.2-201ENST00000427497 TRMT6Q9UJA5 497 aaKnown RBP17.75■□□□□ 0.43
AC055811.2-201ENST00000427497 GNPTGQ9UJJ9 305 aa17.75■□□□□ 0.43
AC055811.2-201ENST00000427497 TMPRSS11EQ9UL52 423 aa17.75■□□□□ 0.43
AC055811.2-201ENST00000427497 PCDHGA2Q9Y5H1 932 aa17.75■□□□□ 0.43
AC055811.2-201ENST00000427497 OTOGLQ3ZCN5 2332 aa17.74■□□□□ 0.43
AC055811.2-201ENST00000427497 H3BMM5 538 aa17.74■□□□□ 0.43
AC055811.2-201ENST00000427497 LYPLA1O75608 230 aaPredicted RBP17.74■□□□□ 0.43
AC055811.2-201ENST00000427497 TSPAN12O95859 305 aa17.74■□□□□ 0.43
AC055811.2-201ENST00000427497 GM2AP17900 193 aa17.74■□□□□ 0.43
AC055811.2-201ENST00000427497 ATP5F1P24539 256 aaPredicted RBP17.74■□□□□ 0.43
AC055811.2-201ENST00000427497 DNAJB13P59910 316 aa17.74■□□□□ 0.43
AC055811.2-201ENST00000427497 IFT88Q13099 833 aa17.74■□□□□ 0.43
AC055811.2-201ENST00000427497 HENMT1Q5T8I9 393 aaKnown RBP17.74■□□□□ 0.43
AC055811.2-201ENST00000427497 UGT3A1Q6NUS8 523 aa17.74■□□□□ 0.43
AC055811.2-201ENST00000427497 TSSK4Q6SA08 328 aa17.74■□□□□ 0.43
AC055811.2-201ENST00000427497 CRLF3Q8IUI8 442 aa17.74■□□□□ 0.43
AC055811.2-201ENST00000427497 NKAPQ8N5F7 415 aaKnown RBP17.74■□□□□ 0.43
AC055811.2-201ENST00000427497 SIDT2Q8NBJ9 832 aaKnown RBP17.74■□□□□ 0.43
AC055811.2-201ENST00000427497 RFWD2Q8NHY2 731 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms