RNA–Protein interactions for RNA: ENST00000426683.5

HERC3-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-205ENST00000426683 SKIDA1Q1XH10 827 aa17.77■□□□□ 0.44
HERC3-205ENST00000426683 ZRANB3Q5FWF4 1079 aa17.77■□□□□ 0.44
HERC3-205ENST00000426683 Q8N9G6 341 aaPredicted RBP17.77■□□□□ 0.44
HERC3-205ENST00000426683 WDR48Q8TAF3 677 aa17.77■□□□□ 0.44
HERC3-205ENST00000426683 DEPDC7Q96QD5 511 aa17.77■□□□□ 0.44
HERC3-205ENST00000426683 TIMM29Q9BSF4 260 aa17.77■□□□□ 0.44
HERC3-205ENST00000426683 KCND1Q9NSA2 647 aa17.77■□□□□ 0.44
HERC3-205ENST00000426683 SAR1BQ9Y6B6 198 aa17.77■□□□□ 0.44
HERC3-205ENST00000426683 TCRBV7S3A2A0A539 114 aa17.76■□□□□ 0.43
HERC3-205ENST00000426683 OR2AG2A6NM03 316 aa17.76■□□□□ 0.43
HERC3-205ENST00000426683 RHPN2P1A8MT19 583 aa17.76■□□□□ 0.43
HERC3-205ENST00000426683 RPLP0P05388 317 aaKnown RBP17.76■□□□□ 0.43
HERC3-205ENST00000426683 PSMA3P25788 255 aa17.76■□□□□ 0.43
HERC3-205ENST00000426683 CDKN1CP49918 316 aaPredicted RBP17.76■□□□□ 0.43
HERC3-205ENST00000426683 ARSDP51689 593 aa17.76■□□□□ 0.43
HERC3-205ENST00000426683 SESN2P58004 480 aaPredicted RBP17.76■□□□□ 0.43
HERC3-205ENST00000426683 CCL7P80098 99 aa17.76■□□□□ 0.43
HERC3-205ENST00000426683 SPIDRQ14159 915 aa17.76■□□□□ 0.43
HERC3-205ENST00000426683 GPR33Q49SQ1 333 aa17.76■□□□□ 0.43
HERC3-205ENST00000426683 TSTD2Q5T7W7 516 aa17.76■□□□□ 0.43
HERC3-205ENST00000426683 TMEM220Q6QAJ8 160 aa17.76■□□□□ 0.43
HERC3-205ENST00000426683 DET1Q7L5Y6 550 aa17.76■□□□□ 0.43
HERC3-205ENST00000426683 C11orf96Q7Z7L8 435 aa17.76■□□□□ 0.43
HERC3-205ENST00000426683 CCNJLQ8IV13 435 aa17.76■□□□□ 0.43
HERC3-205ENST00000426683 NXPE1Q8N323 547 aa17.76■□□□□ 0.43
HERC3-205ENST00000426683 PPHLN1Q8NEY8 458 aaKnown RBP17.76■□□□□ 0.43
HERC3-205ENST00000426683 SLC37A2Q8TED4 501 aa17.76■□□□□ 0.43
HERC3-205ENST00000426683 GRK7Q8WTQ7 553 aa17.76■□□□□ 0.43
HERC3-205ENST00000426683 DCUN1D1Q96GG9 259 aa17.76■□□□□ 0.43
HERC3-205ENST00000426683 LRRN3Q9H3W5 708 aa17.76■□□□□ 0.43
HERC3-205ENST00000426683 PRDM8Q9NQV8 689 aa17.76■□□□□ 0.43
HERC3-205ENST00000426683 NEU2Q9Y3R4 380 aa17.76■□□□□ 0.43
HERC3-205ENST00000426683 TCAF1Q9Y4C2 921 aa17.76■□□□□ 0.43
HERC3-205ENST00000426683 PTPRBP23467 1997 aa17.75■□□□□ 0.43
HERC3-205ENST00000426683 A0A1W2PQM1 296 aa17.75■□□□□ 0.43
HERC3-205ENST00000426683 A6NCN8 305 aa17.75■□□□□ 0.43
HERC3-205ENST00000426683 AP3B1O00203 1094 aa17.75■□□□□ 0.43
HERC3-205ENST00000426683 FANCGO15287 622 aa17.75■□□□□ 0.43
HERC3-205ENST00000426683 PPM1DO15297 605 aa17.75■□□□□ 0.43
HERC3-205ENST00000426683 CSO75390 466 aaKnown RBP17.75■□□□□ 0.43
HERC3-205ENST00000426683 TCEA3O75764 348 aa17.75■□□□□ 0.43
HERC3-205ENST00000426683 PRSS56P0CW18 603 aa17.75■□□□□ 0.43
HERC3-205ENST00000426683 F3P13726 295 aa17.75■□□□□ 0.43
HERC3-205ENST00000426683 SLC2A4P14672 509 aa17.75■□□□□ 0.43
HERC3-205ENST00000426683 VCLP18206 1134 aa17.75■□□□□ 0.43
HERC3-205ENST00000426683 CDK16Q00536 496 aa17.75■□□□□ 0.43
HERC3-205ENST00000426683 CACNG1Q06432 222 aa17.75■□□□□ 0.43
HERC3-205ENST00000426683 KCNJ11Q14654 390 aa17.75■□□□□ 0.43
HERC3-205ENST00000426683 FNBP1LQ5T0N5 605 aa17.75■□□□□ 0.43
HERC3-205ENST00000426683 LRRC8BQ6P9F7 803 aa17.75■□□□□ 0.43
HERC3-205ENST00000426683 IYDQ6PHW0 289 aa17.75■□□□□ 0.43
HERC3-205ENST00000426683 RBM44Q6ZP01 1051 aaKnown RBP17.75■□□□□ 0.43
HERC3-205ENST00000426683 TAS2R42Q7RTR8 314 aa17.75■□□□□ 0.43
HERC3-205ENST00000426683 ZNF438Q7Z4V0 828 aa17.75■□□□□ 0.43
HERC3-205ENST00000426683 SPRED1Q7Z699 444 aa17.75■□□□□ 0.43
HERC3-205ENST00000426683 CREG2Q8IUH2 290 aa17.75■□□□□ 0.43
HERC3-205ENST00000426683 SFRP1Q8N474 314 aa17.75■□□□□ 0.43
HERC3-205ENST00000426683 OR13J1Q8NGT2 312 aa17.75■□□□□ 0.43
HERC3-205ENST00000426683 NAT14Q8WUY8 206 aa17.75■□□□□ 0.43
HERC3-205ENST00000426683 SGF29Q96ES7 293 aa17.75■□□□□ 0.43
HERC3-205ENST00000426683 ZNF778Q96MU6 729 aa17.75■□□□□ 0.43
HERC3-205ENST00000426683 COPS8Q99627 209 aa17.75■□□□□ 0.43
HERC3-205ENST00000426683 DDX47Q9H0S4 455 aaKnown RBP17.75■□□□□ 0.43
HERC3-205ENST00000426683 SLC2A6Q9UGQ3 507 aa17.75■□□□□ 0.43
HERC3-205ENST00000426683 GOLGA4Q13439 2230 aaKnown RBP17.75■□□□□ 0.43
HERC3-205ENST00000426683 ZNF106Q9H2Y7 1883 aaKnown RBP17.74■□□□□ 0.43
HERC3-205ENST00000426683 TRBV5-4A0A0C4DH59 114 aa17.74■□□□□ 0.43
HERC3-205ENST00000426683 CCDC162PA2VCL2 907 aa17.74■□□□□ 0.43
HERC3-205ENST00000426683 TRABD2BA6NFA1 517 aa17.74■□□□□ 0.43
HERC3-205ENST00000426683 OR51F1A6NGY5 319 aa17.74■□□□□ 0.43
HERC3-205ENST00000426683 PDZK1P1A8MUH7 402 aa17.74■□□□□ 0.43
HERC3-205ENST00000426683 CFAP99D6REC4 459 aa17.74■□□□□ 0.43
HERC3-205ENST00000426683 NTN3O00634 580 aaPredicted RBP17.74■□□□□ 0.43
HERC3-205ENST00000426683 POP7O75817 140 aaKnown RBP17.74■□□□□ 0.43
HERC3-205ENST00000426683 RALBP11234 206 aa17.74■□□□□ 0.43
HERC3-205ENST00000426683 ACRV1P26436 265 aa17.74■□□□□ 0.43
HERC3-205ENST00000426683 MAGEA6P43360 314 aa17.74■□□□□ 0.43
HERC3-205ENST00000426683 NPY2RP49146 381 aa17.74■□□□□ 0.43
HERC3-205ENST00000426683 B4GALNT1Q00973 533 aa17.74■□□□□ 0.43
HERC3-205ENST00000426683 SEPT7Q16181 437 aaKnown RBP17.74■□□□□ 0.43
HERC3-205ENST00000426683 ISXQ2M1V0 245 aa17.74■□□□□ 0.43
HERC3-205ENST00000426683 PCID2Q5JVF3 399 aa17.74■□□□□ 0.43
HERC3-205ENST00000426683 ZNF534Q76KX8 674 aa17.74■□□□□ 0.43
HERC3-205ENST00000426683 NLRP9Q7RTR0 991 aa17.74■□□□□ 0.43
HERC3-205ENST00000426683 AMZ2Q86W34 360 aa17.74■□□□□ 0.43
HERC3-205ENST00000426683 SERPINA9Q86WD7 417 aa17.74■□□□□ 0.43
HERC3-205ENST00000426683 BEND7Q8N7W2 519 aaPredicted RBP17.74■□□□□ 0.43
HERC3-205ENST00000426683 HEXDCQ8WVB3 486 aa17.74■□□□□ 0.43
HERC3-205ENST00000426683 HDAC10Q969S8 669 aa17.74■□□□□ 0.43
HERC3-205ENST00000426683 CCDC97Q96F63 343 aaPredicted RBP17.74■□□□□ 0.43
HERC3-205ENST00000426683 ZNF514Q96K75 400 aaPredicted RBP17.74■□□□□ 0.43
HERC3-205ENST00000426683 GFM1Q96RP9 751 aaKnown RBP17.74■□□□□ 0.43
HERC3-205ENST00000426683 ZDHHC3Q9NYG2 299 aa17.74■□□□□ 0.43
HERC3-205ENST00000426683 BFARQ9NZS9 450 aa17.74■□□□□ 0.43
HERC3-205ENST00000426683 RIMKLBQ9ULI2 386 aa17.74■□□□□ 0.43
HERC3-205ENST00000426683 PCDHB1Q9Y5F3 818 aa17.74■□□□□ 0.43
HERC3-205ENST00000426683 DNMT3AQ9Y6K1 912 aaPredicted RBP17.74■□□□□ 0.43
HERC3-205ENST00000426683 MYLKQ15746 1914 aa17.73■□□□□ 0.43
HERC3-205ENST00000426683 PLXNB3Q9ULL4 1909 aa17.73■□□□□ 0.43
HERC3-205ENST00000426683 KIR2DS5A0A0G2JLQ3 304 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms