RNA–Protein interactions for RNA: ENST00000423442.6

LINC00458-201, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,060 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-201ENST00000423442 CALCOCO1Q9P1Z2 691 aa5.74□□□□□ -1.49
LINC00458-201ENST00000423442 USP36Q9P275 1121 aaKnown RBP5.74□□□□□ -1.49
LINC00458-201ENST00000423442 SLC25A13Q9UJS0 675 aa5.74□□□□□ -1.49
LINC00458-201ENST00000423442 CLEC4EQ9ULY5 219 aa5.74□□□□□ -1.49
LINC00458-201ENST00000423442 SCML1Q9UN30 329 aa5.74□□□□□ -1.49
LINC00458-201ENST00000423442 ERVW-1Q9UQF0 538 aa5.74□□□□□ -1.49
LINC00458-201ENST00000423442 RAD54BQ9Y620 910 aa5.74□□□□□ -1.49
LINC00458-201ENST00000423442 PTPRBP23467 1997 aa5.74□□□□□ -1.49
LINC00458-201ENST00000423442 EDDM13A0A1B0GTR0 161 aa5.73□□□□□ -1.49
LINC00458-201ENST00000423442 A0A1B0GVM2 712 aa5.73□□□□□ -1.49
LINC00458-201ENST00000423442 A0A1W2PR48 441 aa5.73□□□□□ -1.49
LINC00458-201ENST00000423442 SYCE3A1L190 88 aa5.73□□□□□ -1.49
LINC00458-201ENST00000423442 SH3BP5O60239 455 aa5.73□□□□□ -1.49
LINC00458-201ENST00000423442 DAB1O75553 588 aa5.73□□□□□ -1.49
LINC00458-201ENST00000423442 RNF8O76064 485 aa5.73□□□□□ -1.49
LINC00458-201ENST00000423442 SPDEFO95238 335 aa5.73□□□□□ -1.49
LINC00458-201ENST00000423442 TPM1P09493 284 aa5.73□□□□□ -1.49
LINC00458-201ENST00000423442 FTH1P19P0C7X4 201 aa5.73□□□□□ -1.49
LINC00458-201ENST00000423442 CDK4P11802 303 aa5.73□□□□□ -1.49
LINC00458-201ENST00000423442 HLA-EP13747 358 aa5.73□□□□□ -1.49
LINC00458-201ENST00000423442 CD40P25942 277 aa5.73□□□□□ -1.49
LINC00458-201ENST00000423442 OR1E1P30953 314 aa5.73□□□□□ -1.49
LINC00458-201ENST00000423442 CD70P32970 193 aa5.73□□□□□ -1.49
LINC00458-201ENST00000423442 CDH5P33151 784 aaPredicted RBP5.73□□□□□ -1.49
LINC00458-201ENST00000423442 CSKP41240 450 aa5.73□□□□□ -1.49
LINC00458-201ENST00000423442 RECQLP46063 649 aaPredicted RBP5.73□□□□□ -1.49
LINC00458-201ENST00000423442 CXCR3P49682 368 aa5.73□□□□□ -1.49
LINC00458-201ENST00000423442 TPMTP51580 245 aa5.73□□□□□ -1.49
LINC00458-201ENST00000423442 CDH4P55283 916 aa5.73□□□□□ -1.49
LINC00458-201ENST00000423442 UBASH3AP57075 661 aa5.73□□□□□ -1.49
LINC00458-201ENST00000423442 SQSTM1Q13501 440 aa5.73□□□□□ -1.49
LINC00458-201ENST00000423442 ENPP2Q13822 863 aa5.73□□□□□ -1.49
LINC00458-201ENST00000423442 TRIP6Q15654 476 aaKnown RBP5.73□□□□□ -1.49
LINC00458-201ENST00000423442 KLHL40Q2TBA0 621 aa5.73□□□□□ -1.49
LINC00458-201ENST00000423442 PTPN20Q4JDL3 420 aa5.73□□□□□ -1.49
LINC00458-201ENST00000423442 FAM133BQ5BKY9 247 aaKnown RBP5.73□□□□□ -1.49
LINC00458-201ENST00000423442 PITRM1Q5JRX3 1037 aa5.73□□□□□ -1.49
LINC00458-201ENST00000423442 FAM46CQ5VWP2 391 aa5.73□□□□□ -1.49
LINC00458-201ENST00000423442 ZNF776Q68DI1 518 aaPredicted RBP5.73□□□□□ -1.49
LINC00458-201ENST00000423442 SP5Q6BEB4 398 aaPredicted RBP5.73□□□□□ -1.49
LINC00458-201ENST00000423442 NADSYN1Q6IA69 706 aa5.73□□□□□ -1.49
LINC00458-201ENST00000423442 RETSATQ6NUM9 610 aa5.73□□□□□ -1.49
LINC00458-201ENST00000423442 FBXL22Q6P050 247 aa5.73□□□□□ -1.49
LINC00458-201ENST00000423442 SCYL2Q6P3W7 929 aa5.73□□□□□ -1.49
LINC00458-201ENST00000423442 MMS22LQ6ZRQ5 1243 aa5.73□□□□□ -1.49
LINC00458-201ENST00000423442 ESPNLQ6ZVH7 1005 aa5.73□□□□□ -1.49
LINC00458-201ENST00000423442 ARCQ7LC44 396 aa5.73□□□□□ -1.49
LINC00458-201ENST00000423442 KIAA0907Q7Z7F0 614 aaPredicted RBP5.73□□□□□ -1.49
LINC00458-201ENST00000423442 SETD3Q86TU7 594 aaPredicted RBP5.73□□□□□ -1.49
LINC00458-201ENST00000423442 ZNF354CQ86Y25 554 aa5.73□□□□□ -1.49
LINC00458-201ENST00000423442 CCAR2Q8N163 923 aaKnown RBP5.73□□□□□ -1.49
LINC00458-201ENST00000423442 NXPE1Q8N323 547 aa5.73□□□□□ -1.49
LINC00458-201ENST00000423442 MINDY1Q8N5J2 469 aa5.73□□□□□ -1.49
LINC00458-201ENST00000423442 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.73□□□□□ -1.49
LINC00458-201ENST00000423442 BOLLQ8N9W6 283 aaKnown RBP5.73□□□□□ -1.49
LINC00458-201ENST00000423442 CADM4Q8NFZ8 388 aa5.73□□□□□ -1.49
LINC00458-201ENST00000423442 SNX19Q92543 992 aa5.73□□□□□ -1.49
LINC00458-201ENST00000423442 IQCDQ96DY2 449 aa5.73□□□□□ -1.49
LINC00458-201ENST00000423442 ZNF419Q96HQ0 510 aaPredicted RBP5.73□□□□□ -1.49
LINC00458-201ENST00000423442 HAPLN3Q96S86 360 aa5.73□□□□□ -1.49
LINC00458-201ENST00000423442 NPY6RQ99463 290 aa5.73□□□□□ -1.49
LINC00458-201ENST00000423442 FEM1AQ9BSK4 669 aa5.73□□□□□ -1.49
LINC00458-201ENST00000423442 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.73□□□□□ -1.49
LINC00458-201ENST00000423442 GPR174Q9BXC1 333 aa5.73□□□□□ -1.49
LINC00458-201ENST00000423442 EDEM3Q9BZQ6 932 aa5.73□□□□□ -1.49
LINC00458-201ENST00000423442 BTBD1Q9H0C5 482 aa5.73□□□□□ -1.49
LINC00458-201ENST00000423442 TMEM245Q9H330 911 aa5.73□□□□□ -1.49
LINC00458-201ENST00000423442 RETREG1Q9H6L5 497 aa5.73□□□□□ -1.49
LINC00458-201ENST00000423442 PRSS16Q9NQE7 514 aa5.73□□□□□ -1.49
LINC00458-201ENST00000423442 DONSONQ9NYP3 566 aa5.73□□□□□ -1.49
LINC00458-201ENST00000423442 OR12D3Q9UGF7 316 aa5.73□□□□□ -1.49
LINC00458-201ENST00000423442 VPS28Q9UK41 221 aa5.73□□□□□ -1.49
LINC00458-201ENST00000423442 PILRBQ9UKJ0 227 aa5.73□□□□□ -1.49
LINC00458-201ENST00000423442 VANGL2Q9ULK5 521 aa5.73□□□□□ -1.49
LINC00458-201ENST00000423442 MYO6Q9UM54 1294 aa5.73□□□□□ -1.49
LINC00458-201ENST00000423442 CLCA2Q9UQC9 943 aa5.73□□□□□ -1.49
LINC00458-201ENST00000423442 ZKSCAN5Q9Y2L8 839 aa5.73□□□□□ -1.49
LINC00458-201ENST00000423442 RAI2Q9Y5P3 530 aa5.73□□□□□ -1.49
LINC00458-201ENST00000423442 BZW2Q9Y6E2 419 aaKnown RBP5.73□□□□□ -1.49
LINC00458-201ENST00000423442 PLXND1Q9Y4D7 1925 aa5.73□□□□□ -1.49
LINC00458-201ENST00000423442 PCDH15Q96QU1 1955 aa5.73□□□□□ -1.49
LINC00458-201ENST00000423442 ASXL3Q9C0F0 2248 aa5.72□□□□□ -1.49
LINC00458-201ENST00000423442 A0A087WV48 116 aa5.72□□□□□ -1.49
LINC00458-201ENST00000423442 TBC1D3DA0A087WVF3 549 aa5.72□□□□□ -1.49
LINC00458-201ENST00000423442 TBC1D3IA0A087WXS9 549 aa5.72□□□□□ -1.49
LINC00458-201ENST00000423442 TBC1D3EA0A087X179 549 aa5.72□□□□□ -1.49
LINC00458-201ENST00000423442 TBC1D3KA0A087X1G2 549 aa5.72□□□□□ -1.49
LINC00458-201ENST00000423442 IGHV1OR15-9A0A0B4J2B8 117 aa5.72□□□□□ -1.49
LINC00458-201ENST00000423442 A0A1B0GTW7 788 aa5.72□□□□□ -1.49
LINC00458-201ENST00000423442 FAM170AA1A519 330 aa5.72□□□□□ -1.49
LINC00458-201ENST00000423442 TBC1D3FA6NER0 549 aaPredicted RBP5.72□□□□□ -1.49
LINC00458-201ENST00000423442 FAM47DPA6NHR8 397 aa5.72□□□□□ -1.49
LINC00458-201ENST00000423442 LRRC72A6NJI9 287 aa5.72□□□□□ -1.49
LINC00458-201ENST00000423442 SIGLEC16A6NMB1 481 aa5.72□□□□□ -1.49
LINC00458-201ENST00000423442 TBC1D3LB9A6J9 549 aa5.72□□□□□ -1.49
LINC00458-201ENST00000423442 DIRC3C9JPN6 131 aa5.72□□□□□ -1.49
LINC00458-201ENST00000423442 RNASEH2AO75792 299 aaKnown RBP5.72□□□□□ -1.49
LINC00458-201ENST00000423442 ADCY5O95622 1261 aa5.72□□□□□ -1.49
LINC00458-201ENST00000423442 IGLV3-25P01717 112 aa5.72□□□□□ -1.49
LINC00458-201ENST00000423442 SERPINF2P08697 491 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms