RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 RBL1P28749 1068 aa14.98□□□□□ -0.01
USB1-202ENST00000423271 PPM1FP49593 454 aaPredicted RBP14.98□□□□□ -0.01
USB1-202ENST00000423271 ARSDP51689 593 aa14.98□□□□□ -0.01
USB1-202ENST00000423271 COPS2P61201 443 aa14.98□□□□□ -0.01
USB1-202ENST00000423271 RHDQ02161 417 aa14.98□□□□□ -0.01
USB1-202ENST00000423271 TRA2AQ13595 282 aaKnown RBP eCLIP14.98□□□□□ -0.01
USB1-202ENST00000423271 INSCQ1MX18 579 aa14.98□□□□□ -0.01
USB1-202ENST00000423271 ATP13A5Q4VNC0 1218 aa14.98□□□□□ -0.01
USB1-202ENST00000423271 TAF1BQ53T94 588 aaPredicted RBP14.98□□□□□ -0.01
USB1-202ENST00000423271 TMEM71Q6P5X7 295 aa14.98□□□□□ -0.01
USB1-202ENST00000423271 VASH2Q86V25 355 aa14.98□□□□□ -0.01
USB1-202ENST00000423271 ZNF547Q8IVP9 402 aa14.98□□□□□ -0.01
USB1-202ENST00000423271 UBL4BQ8N7F7 174 aa14.98□□□□□ -0.01
USB1-202ENST00000423271 LSM14AQ8ND56 463 aaKnown RBP14.98□□□□□ -0.01
USB1-202ENST00000423271 OR10G6Q8NH81 332 aa14.98□□□□□ -0.01
USB1-202ENST00000423271 TTC9Q92623 222 aa14.98□□□□□ -0.01
USB1-202ENST00000423271 AHCYL2Q96HN2 611 aaKnown RBP14.98□□□□□ -0.01
USB1-202ENST00000423271 PLEKHG4BQ96PX9 1271 aa14.98□□□□□ -0.01
USB1-202ENST00000423271 ALS2CR12Q96Q35 445 aa14.98□□□□□ -0.01
USB1-202ENST00000423271 VAT1Q99536 393 aa14.98□□□□□ -0.01
USB1-202ENST00000423271 FAM118BQ9BPY3 351 aa14.98□□□□□ -0.01
USB1-202ENST00000423271 GORASP1Q9BQQ3 440 aa14.98□□□□□ -0.01
USB1-202ENST00000423271 AKAP7Q9P0M2 348 aaPredicted RBP14.98□□□□□ -0.01
USB1-202ENST00000423271 SCHIP1Q9P0W5 487 aaPredicted RBP14.98□□□□□ -0.01
USB1-202ENST00000423271 RSPH14Q9UHP6 348 aa14.98□□□□□ -0.01
USB1-202ENST00000423271 DNAJC16Q9Y2G8 782 aa14.98□□□□□ -0.01
USB1-202ENST00000423271 PIEZO2Q9H5I5 2752 aa14.98□□□□□ -0.01
USB1-202ENST00000423271 ZNF462Q96JM2 2506 aa14.97□□□□□ -0.01
USB1-202ENST00000423271 KIR2DS5A0A0G2JLQ3 304 aa14.97□□□□□ -0.01
USB1-202ENST00000423271 A0A0G2JNG1 304 aa14.97□□□□□ -0.01
USB1-202ENST00000423271 GPR89AB7ZAQ6 455 aa14.97□□□□□ -0.01
USB1-202ENST00000423271 H7C0C1 242 aa14.97□□□□□ -0.01
USB1-202ENST00000423271 KIR2DS3K7RE56 304 aa14.97□□□□□ -0.01
USB1-202ENST00000423271 ZSCAN12O43309 604 aa14.97□□□□□ -0.01
USB1-202ENST00000423271 BUD23O43709 281 aaKnown RBP14.97□□□□□ -0.01
USB1-202ENST00000423271 EPOP01588 193 aa14.97□□□□□ -0.01
USB1-202ENST00000423271 GPR89BP0CG08 455 aa14.97□□□□□ -0.01
USB1-202ENST00000423271 PYGMP11217 842 aa14.97□□□□□ -0.01
USB1-202ENST00000423271 CA5AP35218 305 aa14.97□□□□□ -0.01
USB1-202ENST00000423271 PTPN7P35236 360 aa14.97□□□□□ -0.01
USB1-202ENST00000423271 HMGCLP35914 325 aa14.97□□□□□ -0.01
USB1-202ENST00000423271 MAPK9P45984 424 aa14.97□□□□□ -0.01
USB1-202ENST00000423271 ATP5OP48047 213 aa14.97□□□□□ -0.01
USB1-202ENST00000423271 CLCNKAP51800 687 aa14.97□□□□□ -0.01
USB1-202ENST00000423271 UBE2IP63279 158 aaKnown RBP14.97□□□□□ -0.01
USB1-202ENST00000423271 OTUD4Q01804 1114 aaKnown RBP14.97□□□□□ -0.01
USB1-202ENST00000423271 MPP3Q13368 585 aa14.97□□□□□ -0.01
USB1-202ENST00000423271 KIR2DS5Q14953 304 aa14.97□□□□□ -0.01
USB1-202ENST00000423271 SLC1A5Q15758 541 aa14.97□□□□□ -0.01
USB1-202ENST00000423271 SNAP47Q5SQN1 464 aa14.97□□□□□ -0.01
USB1-202ENST00000423271 CCDC181Q5TID7 509 aa14.97□□□□□ -0.01
USB1-202ENST00000423271 SLC9B2Q86UD5 537 aa14.97□□□□□ -0.01
USB1-202ENST00000423271 LRRTM4Q86VH4 590 aa14.97□□□□□ -0.01
USB1-202ENST00000423271 DTX1Q86Y01 620 aa14.97□□□□□ -0.01
USB1-202ENST00000423271 AGBL5Q8NDL9 886 aa14.97□□□□□ -0.01
USB1-202ENST00000423271 ACTL9Q8TC94 416 aa14.97□□□□□ -0.01
USB1-202ENST00000423271 BLOC1S5Q8TDH9 187 aa14.97□□□□□ -0.01
USB1-202ENST00000423271 VPS35Q96QK1 796 aa14.97□□□□□ -0.01
USB1-202ENST00000423271 SRPK1Q96SB4 655 aaKnown RBP14.97□□□□□ -0.01
USB1-202ENST00000423271 DPYSL5Q9BPU6 564 aa14.97□□□□□ -0.01
USB1-202ENST00000423271 TBC1D10AQ9BXI6 508 aa14.97□□□□□ -0.01
USB1-202ENST00000423271 OSBPL8Q9BZF1 889 aa14.97□□□□□ -0.01
USB1-202ENST00000423271 GBA3Q9H227 469 aa14.97□□□□□ -0.01
USB1-202ENST00000423271 TRABDQ9H4I3 376 aa14.97□□□□□ -0.01
USB1-202ENST00000423271 STN1Q9H668 368 aaKnown RBP14.97□□□□□ -0.01
USB1-202ENST00000423271 IL26Q9NPH9 171 aa14.97□□□□□ -0.01
USB1-202ENST00000423271 OCIAD1Q9NX40 245 aa14.97□□□□□ -0.01
USB1-202ENST00000423271 IL17CQ9P0M4 197 aa14.97□□□□□ -0.01
USB1-202ENST00000423271 CPNE7Q9UBL6 633 aa14.97□□□□□ -0.01
USB1-202ENST00000423271 PYCARDQ9ULZ3 195 aa14.97□□□□□ -0.01
USB1-202ENST00000423271 HELZ2Q9BYK8 2649 aaKnown RBP14.96□□□□□ -0.01
USB1-202ENST00000423271 COL6A6A6NMZ7 2263 aa14.96□□□□□ -0.01
USB1-202ENST00000423271 BSNQ9UPA5 3926 aa14.96□□□□□ -0.01
USB1-202ENST00000423271 PRR19A6NJB7 356 aa14.96□□□□□ -0.01
USB1-202ENST00000423271 A8MU76 341 aa14.96□□□□□ -0.01
USB1-202ENST00000423271 KMOO15229 486 aa14.96□□□□□ -0.01
USB1-202ENST00000423271 CDK14O94921 469 aa14.96□□□□□ -0.01
USB1-202ENST00000423271 SLC2A4P14672 509 aa14.96□□□□□ -0.01
USB1-202ENST00000423271 ZNF7P17097 686 aaPredicted RBP14.96□□□□□ -0.01
USB1-202ENST00000423271 WT1P19544 449 aaPredicted RBP14.96□□□□□ -0.01
USB1-202ENST00000423271 HLA-DPA1P20036 260 aa14.96□□□□□ -0.01
USB1-202ENST00000423271 CSTF2P33240 577 aaKnown RBP eCLIP14.96□□□□□ -0.01
USB1-202ENST00000423271 SPAM1P38567 509 aa14.96□□□□□ -0.01
USB1-202ENST00000423271 XRCC4Q13426 336 aa14.96□□□□□ -0.01
USB1-202ENST00000423271 OLIG2Q13516 323 aa14.96□□□□□ -0.01
USB1-202ENST00000423271 PTPRCAPQ14761 206 aa14.96□□□□□ -0.01
USB1-202ENST00000423271 CHRNA6Q15825 494 aa14.96□□□□□ -0.01
USB1-202ENST00000423271 SEPT7Q16181 437 aaKnown RBP14.96□□□□□ -0.01
USB1-202ENST00000423271 MEI1Q5TIA1 1274 aa14.96□□□□□ -0.01
USB1-202ENST00000423271 FAM151BQ6UXP7 276 aa14.96□□□□□ -0.01
USB1-202ENST00000423271 GLT6D1Q7Z4J2 308 aa14.96□□□□□ -0.01
USB1-202ENST00000423271 TRIM58Q8NG06 486 aa14.96□□□□□ -0.01
USB1-202ENST00000423271 JPH3Q8WXH2 748 aaPredicted RBP14.96□□□□□ -0.01
USB1-202ENST00000423271 ART4Q93070 314 aa14.96□□□□□ -0.01
USB1-202ENST00000423271 TIMM29Q9BSF4 260 aa14.96□□□□□ -0.01
USB1-202ENST00000423271 FICDQ9BVA6 458 aa14.96□□□□□ -0.01
USB1-202ENST00000423271 SEMA4CQ9C0C4 833 aa14.96□□□□□ -0.01
USB1-202ENST00000423271 TRMT1Q9NXH9 659 aaKnown RBP14.96□□□□□ -0.01
USB1-202ENST00000423271 PDP2Q9P2J9 529 aa14.96□□□□□ -0.01
USB1-202ENST00000423271 TRHDEQ9UKU6 1024 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms